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Abraham, Baxter

Publications and source records attributed to Abraham, Baxter.

Local Structure of Sulfur Vacancies on the Basal Plane of Monolayer MoS 2

We report the nature of the S-vacancy is central to controlling the electronic properties of monolayer MoS 2 . Understanding the geometric and electronic structures of the S-vacancy on the basal plane of monolayer MoS 2 remains elusive. Here, operando S K-edge X-ray absorption spectroscopy shows the formation of clustered S-vacancies on the basal plane of monolayer MoS 2 under reaction conditions (H 2 atmosphere, 100–600 °C). First-principles calculations predict spectral fingerprints consistent with the experimental results. The Mo K-edge extended X-ray absorption fine structure shows the local structure as coordinatively unsaturated Mo with 4.1 ± 0.4 S atoms as nearest neighbors (above 400 °C in an H 2 atmosphere). Conversely, the 6-fold Mo–Mo coordination in the crystal remains unchanged. Electrochemistry confirms similar active sites for hydrogen evolution. The identity of the S-vacancy defect on the basal plane of monolayer MoS 2 is herein elucidated for applications in optoelectronics and catalysis.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Operando Study of Thermal Oxidation of Monolayer MoS 2

Abstract Monolayer MoS 2 is a promising semiconductor to overcome the physical dimension limits of microelectronic devices. Understanding the thermochemical stability of MoS 2 is essential since these devices generate heat and are susceptible to oxidative environments. Herein, the promoting effect of molybdenum oxides (MoO x ) particles on the thermal oxidation of MoS 2 monolayers is shown by employing operando X‐ray absorption spectroscopy, ex situ scanning electron microscopy and X‐ray photoelectron spectroscopy. The study demonstrates that chemical vapor deposition‐grown MoS 2 monolayers contain intrinsic MoO x and are quickly oxidized at 100 °C (3 vol% O 2 /He), in contrast to previously reported oxidation thresholds (e.g., 250 °C, t ≤ 1 h in the air). Otherwise, removing MoO x increases the thermal oxidation onset temperature of monolayer MoS 2 to 300 °C. These results indicate that MoO x promote oxidation. An oxide‐free lattice is critical to the long‐term stability of monolayer MoS 2 in state‐of‐the‐art 2D electronic, optical, and catalytic applications.

2-dimensional material↗

Electronic–Vibrational Coupling and Electron Transfer

This Feature Article describes our recent work on implementing pump-degenerate four-wave mixing for studying electronic vibrational coupling in solid-state systems and in particular in interfacial electron transfer systems. Interfacial electron transfer (ET) reactions constitute key physical phenomena central to a variety of light-induced energy transport and conversion processes such as vision, photocatalysis, photovoltaics, energy storage, molecular electronics, etc. Heterogeneous material systems like organic/inorganic interfaces are of particular interest due to the variety of possible modifications to their properties. Although ET dynamics has been studied intensively in heterogeneous systems, many questions remain unanswered. The significance of electronic–vibrational coupling and coherence is one aspect that has yet to be fully explored. It is well-known that ET between a molecule and a semiconductor can be accompanied by vibrational excitation due to Franck–Condon overlap of the excited state and cation. The energy necessary for exciting these high-energy vibrational modes is taken from the excess energy of the transferred electron and leads to an ET spectrum. This spectrum carries information that is associated with the vibrational wavepacket that is involved in the ET process, including the coherent beating that results from periodic attempts to overcome the transition state. The dynamics of the wavepacket, and in particular its coherence time, provides insight into the strength of the coupling between electron donor and acceptor states and the adiabaticity of the process. This information is important but not readily available for interfacial ET systems comprising a large number of possible electron acceptor states because neither the rate of the reaction nor the electronic spectrum allows unambiguous assignment. These recent studies give access to vibrational wave packet dynamics triggered by ET reaction and have the potential to allow direct measurement of Huang–Rys parameters and study fundamental properties of interfacial ET like the adiabaticity and the amount of coherence—electronic and vibrational—in the system.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Vibronic Effects in the Ultrafast Interfacial Electron Transfer of Perylene-Sensitized TiO 2 Surfaces

We combine ultrafast transient absorption (TA) spectroscopy and nonadiabatic quantum dynamics simulations to describe the real-time unfold of vibronic effects on the photoabsorption of TiO 2 anatase sensitized with the (perylen-9-yl)carboxylate dye (Pe-COOH/TiO2). The excited state is mapped in time and frequency by ultrafast broadband spectroscopy while atomistic quantum dynamics is used to simulate the self-consistent vibronic effects. The TA map shows the lifetime of the electronic population generated in the S 1 state of the dye and the rise of the absorption D 0 –D 1 of the cation. The theoretical analysis reveals that the electron transfer from perylene into TiO2 is complete within 20 fs, in agreement with the 12 fs experimental measurement. Because of the structural relaxation produced by the photoinduced electron transfer, the optical gap decreases by 390 meV, in agreement with the D 0 –D 1 transition band. Furthermore, the reorganization energy estimated to be around 220 meV is mostly due to the energy shift of the HOMO level, since the electron transfer occurs in the wide-band limit with little dependence on reorganization energy modes. By assuming the Condon approximation and by making use of the mixed quantum/classical trajectories of the Pe-COOH/TiO 2 system, the absorption spectrum is calculated, and the broad features of the transient absorption spectrum are correlated to excited-state nuclear reorganization effects of the adsorbate dye. The reorganization energy modes are identified by the power spectrum of the velocity autocorrelation function, which shows the occurrence of nonequilibrium modes within the range 1000–1800 cm –1 as in-plane asymmetric C–C vibrations in the perylene dye. The vibrational modes with the strongest influence on the optical gap contribute to shifting the absorption spectrum up in energy by ~2000 cm –1 . Finally, the overall agreement between theory and experiment reveals the capabilities of both methods to study vibronic effects in molecular and extended systems.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

A high-throughput energy-dispersive tender X-ray spectrometer for shot-to-shot sulfur measurements

An X-ray emission spectrometer that can detect the sulfur K α emission lines with large throughput and a high energy resolution is presented. The instrument is based on a large d -spacing perfect Bragg analyzer that diffracts the sulfur K α emission at close to backscattering angles. This facilitates the application of efficient concepts routinely employed in hard X-ray spectrometers towards the tender X-ray regime. The instrument described in this work is based on an energy-dispersive von Hamos geometry that is well suited for photon-in photon-out spectroscopy at X-ray free-electron laser and synchrotron sources. Comparison of its performance with previously used instrumentation is presented through measurements using sulfur-containing species performed at the LCLS. It is shown that the overall signal intensity is increased by a factor of ∼15. Implementation of this approach in the design of a tender X-ray spectroscopy endstation for LCLS-II is also discussed.

36 MATERIALS SCIENCE↗

Revealing Fast Structural Dynamics in pH-Responsive Peptides with Time-Resolved X-ray Scattering

Many biomaterials can adapt to changes in local biological environment (such as pH, temperature or ionic composition) in order to regulate function or deliver a payload. Such adaptation to environmental perturbation is typically a hierarchical process that begins with a response on a local structural level and then propagates to supramolecular and macromolecular scales. Understanding fast structural dynamics that occur upon the perturbation is important for rational design of functional biomaterials. However, few nanosecond time-resolved methods can probe both intra- and inter-molecular scales simultaneously with a high structural resolution. Here we utilize time-resolved x-ray scattering to probe nanosecond to microsecond structural dynamics of polypeptides undergoing protonation via a pH jump initiated by photoexcitation of a photoacid. Our results provide insight into the protonation-induced hierarchical changes in packing of peptide chains, formation of helical structure and associated collapse of the peptide chain.

Rimmerman, Dolev↗

Probing Cytochrome c Folding Transitions upon Phototriggered Environmental Perturbations Using Time-Resolved X-ray Scattering

Direct tracking of protein structural dynamics during folding–unfolding processes is important for understanding the roles of hierarchic structural factors in the formation of functional proteins. As such, using cytochrome c (cyt c) as a platform, we investigated its structural dynamics during folding processes triggered by local environmental changes (i.e., pH or heme iron center oxidation/spin/ligation states) with time-resolved X-ray solution scattering measurements. Starting from partially unfolded cyt c, a sudden pH drop initiated by light excitation of a photoacid caused a structural contraction in microseconds, followed by active site restructuring and unfolding in milliseconds. In contrast, the reduction of iron in the heme via photoinduced electron transfer did not affect conformational stability at short timescales (<1 ms), despite active site coordination geometry changes. These results demonstrate how different environmental perturbations can change the nature of interaction between the active site and protein conformation, even within the same metalloprotein, which will subsequently affect the folding structural dynamics.

Rimmerman, Dolev↗

Analyte-induced spectral filtering in femtosecond transient absorption spectroscopy

Here, we discuss the influence of spectral filtering by samples in femtosecond transient absorption measurements. Commercial instruments for transient absorption spectroscopy (TA) have become increasingly available to scientists in recent years and TA is becoming an established technique to measure the dynamics of photoexcited systems. Furthermore, we show that absorption of the excitation pulse by the sample can severely alter the spectrum and consequently the temporal pulse shape. This “spectral self-filtering” effect can lead to systematic errors and misinterpretation of data, most notably in concentration dependent measurements. Finally, the combination of narrow absorption peaks in the sample with ultrafast broadband excitation pulses is especially prone to this effect.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Ultrafast Relaxation Dynamics of Photoexcited Zinc-Porphyrin: Electronic-Vibrational Coupling

Cyclic tetrapyrroles are the active core of compounds with crucial roles in living systems, such as hemoglobin and chlorophyll, and in technology as photocatalysts and light absorbers for solar energy conversion. Zinc-tetraphenylporphyrin (Zn-TPP) is a prototypical cyclic tetrapyrrole that has been intensely studied in past decades. Because of its importance for photochemical processes the optical properties are of particular interest, and, accordingly, numerous studies have focused on light absorption and excited-state dynamics of Zn-TPP. Relaxation after photoexcitation in the Soret band involves internal conversion that is preceded by an ultrafast process. This relaxation process has been observed by several groups. Until now, it has not been established if it involves a higher lying ”dark” state or vibrational relaxation in the excited S 2 state. Here we combine high time resolution electronic and vibrational spectroscopy to show that this process constitutes vibrational relaxation in the anharmonic 2 potential.

14 SOLAR ENERGY↗

Heterogeneous Electron-Transfer Dynamics through Dipole-Bridge Groups

Heterogeneous electron transfer (HET) between photoexcited molecules and colloidal TiO 2 has been investigated for a set of zinc porphyrin chromophores attached to the semiconductor by linkers that allow the level alignment to be changed by 200 meV through reorientation of the dipole moment. These unique dye molecules were studied by femtosecond transient absorption spectroscopy in solution and adsorbed on a TiO 2 colloidal film in a vacuum. In solution, energy transfer from the excited chromophore to the dipole group was identified as a slow relaxation pathway competing with S 2 –S 1 internal conversion. On the film, heterogeneous electron transfer was found to occur in 80 fs, much faster than all intramolecular pathways. Despite a difference of 200 meV in level alignment of the excited state with respect to the semiconductor conduction band, identical electron-transfer times were measured for different linkers. The measurements were then compared to a quantum-mechanical model that accounts for electronic–vibronic coupling and a finite bandwidth for the acceptor states. We conclude that HET occurs into a distribution of transition states that differ from regular surface states or bridge-mediated states.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗