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Aranson, I. S.

Publications and source records attributed to Aranson, I. S..

6 records
All sourcesNASA NTRSDOE OSTI
DOE OSTI2019

Quantifying hydrodynamic collective states of magnetic colloidal spinners and rollers

Ferromagnetic microparticles energized by an alternating magnetic field exhibit fascinating collective behavior ranging from the emergent self-assembled spinners to a variety of self-organized rolling states. Despite their simplicity, quantifying their essentially multibody collective behavior remains elusive due to a multitude of relevant interactions, from short-range collisions to long-range magnetic and hydrodynamic forces. Here we develop a high-performance computational algorithm based on smoothed particle hydrodynamics to quantify the role of individual interactions in the emergent collective state. The computational model provides insight into the role of hydrodynamic interaction on the onset of collective behavior and allows characterization of dynamic regimes that are hard to access experimentally. Comparison with high-resolution experimental data allows validation of the algorithm. Our work expands the scope of modern computational tools for predictive modeling of microscopic active systems and provides insight into the intricate role of hydrodynamic interactions on the onset of collective behavior in living and synthetic active matter.

75 CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND↗
DOE OSTI2014

Flexibility of bacterial flagella in external shear results in complex swimming trajectories

Many bacteria use rotating helical flagella in swimming motility. In the search for food or migration towards a new habitat, bacteria occasionally unbundle their flagellar filaments and tumble, leading to an abrupt change in direction. Flexible flagella can also be easily deformed by external shear flow, leading to complex bacterial trajectories. Here, we examine the effects of flagella flexibility on the navigation of bacteria in two fundamental shear flows: planar shear and Poiseuille flow realized in long channels. On the basis of slender body elastodynamics and numerical analysis, we discovered a variety of non-trivial effects stemming from the interplay of self-propulsion, elasticity and shear-induced flagellar bending. We show that in planar shear flow the bacteria execute periodic motion, whereas in Poiseuille flow, they migrate towards the centre of the channel or converge towards a limit cycle. We also find that even a small amount of random reorientation can induce a strong response of bacteria, leading to overall non-periodic trajectories. Our findings exemplify the sensitive role of flagellar flexibility and shed new light on the navigation of bacteria in complex shear flows.

Tournus, M.↗
DOE OSTI2014

Modular approach for modeling cell motility

Modeling cell movement is a challenging task since the motility machinery is highly complex. Moreover, there is a rather broad diversity of different cell types. In order to obtain insights into generic features of the motility mechanisms of several distinct cell types, we propose a modular approach that starts with a minimal model, consisting of a phase field description of the moving cell boundary and a simplified internal dynamics. We discuss how this starting point can be extended to increase the level of detail, and how the internal dynamics "module" can be changed/adjusted to properly model various cell types. The former route allows studying specific processes involved in cell motility in the framework of a self-organized moving domain, and the latter might permit to put different cellular motility mechanisms into a unified framework.

Ziebert, F.↗
DOE OSTI2014

Spiral actin-polymerization waves can generate amoeboidal cell crawling

Amoeboidal cell crawling on solid substrates is characterized by protrusions that seemingly appear randomly along the cell periphery and drive the cell forward. For many cell types, it is known that the protrusions result from polymerization of the actin cytoskeleton. However, little is known about how the formation of protrusions is triggered and whether the appearance of subsequent protrusions is coordinated. Recently, the spontaneous formation of actin-polymerization waves was observed. These waves have been proposed to orchestrate the cytoskeletal dynamics during cell crawling. Here, we study the impact of cytoskeletal polymerization waves on cell migration using a phase-field approach. In addition to directionally moving cells, we find states reminiscent of amoeboidal cell crawling. In this framework, new protrusions are seen to emerge from a nucleation process, generating spiral actin waves in the cell interior. Nucleation of new spirals does not require noise, but occurs in a state that is apparently displaying spatio-temporal chaos.

actin-polymerization waves↗
DOE OSTI2014

Living liquid crystals

Collective motion of self-propelled organisms or synthetic par­ticles, often termed •active fluid,• has attracted enormous atten­tion in the broad scientific community because of its fundamentally nonequilibrium nature. Energy input and interactions among the moving units and the medium lead to complex dynamics. Here,we introduce a class of active matter-living liquid crystals (UCs}­ that combines living swimming bacteria with a lyotropic liquid crystal. The physical properties of LLCs can be controlled by the amount of oxygen available to bacteria, by concentration of ingre­dients, or by temperature. Our studies reveal a wealth of intriguing dynamic phenomena. caused by the coupling between the activity-triggered flow and long-range orientational order of the medium. Among these are (i) nonlinear trajectories of bacterial motion guided by nonuniform director, (ii) local melting of the liquid crystal caused by the bacteria-produced shear flows, (iii) activity-triggered transition from a nonflowing uniform state into a flowing one-dimensional periodic pattern and its evolution into a turbulent array of topological defects, and (iv) birefringence­ enabled visualization of microflow generated by the nanometers­ thick bacterial flagella. Unlike their isotropic counterpart, the LLCs show collective dynamic effects at very low volume fraction of bacteria, on the order of 0.2%. Our work suggests an unorthodox design concept to control and manipulate the dynamic behavior of soft active matter and opens the door for potential biosensing and biomedical applications.

36 MATERIALS SCIENCE↗