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Campbell, Scott

Publications and source records attributed to Campbell, Scott.

Applying MALDI-TOF MS to resolve morphologic and genetic similarities between two Dermacentor tick species of public health importance

Abstract Hard ticks (Acari: Ixodidae) have been historically identified by morphological methods which require highly specialized expertise and more recently by DNA-based molecular assays that involve high costs. Although both approaches provide complementary data for tick identification, each method has limitations which restrict their use on large-scale settings such as regional or national tick surveillance programs. To overcome those obstacles, the matrix-assisted laser desorption/ionization time-of-flight mass spectrometry (MALDI-TOF MS) has been introduced as a cost-efficient method for the identification of various organisms, as it balances performance, speed, and high data output. Here we describe the use of this technology to validate the distinction of two closely relatedDermacentortick species based on the development of the first nationwide MALDI-TOF MS reference database described to date. The dataset obtained from this protein-based approach confirms that tick specimens collected from United States regions west of the Rocky Mountains and identified previously asDermacentor variabilisare the recently described species,Dermacentor similis. Therefore, we propose that this integrative taxonomic tool can facilitate vector and vector-borne pathogen surveillance programs in the United States and elsewhere.

Science & Technology - Other Topics↗

Machine learning-based analysis of COVID-19 pandemic impact on US research networks

Here in this study we explore how fallout from the changing public health policy around COVID-19 has changed how researchers access and process their science experiments. Using a combination of techniques from statistical analysis and machine learning, we conduct a retrospective analysis of historical network data for a period around the stay-at-home orders that took place in March 2020. Our analysis takes data from the entire ESnet infrastructure to explore DOE high-performance computing (HPC) resources at OLCF, ALCF, and NERSC, as well as User sites such as PNNL and JLAB. We look at detecting and quantifying changes in site activity using a combination of t-Distributed Stochastic Neighbor Embedding (t-SNE) and decision tree analysis. Our findings bring insights into the working patterns and impact on data volume movements, particularly during late-night hours and weekends.

97 MATHEMATICS AND COMPUTING↗

NNSS Soils Monitoring: Plutonium Valley (CAU 366) FY2016

Desert Research Institute (DRI) is conducting a field assessment of the potential for contaminated soil transport from the Plutonium Valley Contamination Area (CA) as a result of wind transport and storm runoff in support of National Nuclear Security Administration (NNSA) efforts to complete regulatory closure of the contamination areas. The DRI work is intended to confirm the likely mechanism(s) of transport and determine the meteorological conditions that might cause movement of contaminated soils. The emphasis of the work is on collecting sediment transported by channelized storm runoff at the Plutonium Valley investigation sites. These data will inform closure plans that are being developed, which will facilitate the appropriate closure design and post-closure monitoring.

54 ENVIRONMENTAL SCIENCES↗

Scalable collaborative risk management technology for complex critical systems

We describe here our project and plans to develop methods, software tools, and infrastructure tools to address challenges relating to geographically distributed software development. Specifically, this work is creating an infrastructure that supports applications working over distributed geographical and organizational domains and is using this infrastructure to develop a tool that supports project development using risk management and analysis techniques where the participants are not collocated.

requirements prioritization↗

Modified-signed-digit optical computing by using fan-out elements

We present a novel three-step modified-signed-digit optical computing system based on the disrete correlation of space-coded input matrices that are multiply-imaged by using optical fan-out elements. The advantages of our method over other approaches include a larger throughput, more flexible operation, and an easier optical implementation.

Zhou, Shaomin↗

Progress in the development of an artificial gravity simulator (AGS)

The paper describes the short-arm centrifuge for studying the effects of acceleration on human subjects which was built at the Artificial Gravity Simulator (AGS) laboratory at Woodlands, Texas. The AGS centrifuge comprises a turntable, a traction system, a platform, four beds, and a data-communication system. Schematic diagrams are presented of the AGS laboratory layout, the centrifuge turntable, the tiltable (up to 6 deg) bed frame, and of the data collection multiplexer (master switch) for physiological data communications.

Cardus, David↗

Development of an Artificial Gravity Sleeper (AGS)

The design and construction of a 2-meter radius 'human compatible' centrifuge termed the Artificial Gravity Sleeper (AGS) is considered. The centrifuge will accommodate up to four subjects at a time, operate at a broad range of speeds, and have safety features. Experiments that will be conducted on the AGS will help to investigate the quality of sleep during 100 percent gradient centrifugation. A microgravity simulation also will be studied using bed rest to assess the ability of 100 percent gradient centrifugation to function as a countermeasure to cardiovascular deconditioning.

Cardus, David↗