Engineering topics

Chen, Erin

Publications and source records attributed to Chen, Erin.

3 records

DOE OSTI2024

Emittance Measurements with Wire Scanners in the Fermilab Side-Coupled Linac

The Fermilab Side-Coupled Linac accelerates H- beam from 116 MeV to 400 MeV through seven 805 MHz modules. Twelve wire scanners are present in the Side Coupled Linac and four are present in the transfer line between the Linac and the Booster synchrotron ring. These wire scanners act as important diagnostic instru-ments to directly collect information on the beam s transverse distribution. The manipulation of the condi-tions of wire scanner data collection enables further characterization of the beamline, such as calculating emittance and the Twiss parameters of the beam at select regions. Here we present the results of these studies and characterization of the non-Gaussian transverse beam distribution observed.

43 PARTICLE ACCELERATORS↗

DOE OSTI2024

Wire scanner assessment of transverse beam size in the Fermilab side-coupled linac

The Fermilab Side-Coupled Linac contains seven 805 MHz modules accelerating H- beam from 116 MeV to 400 MeV. Each module contains at least one wire scanner, yielding beam intensity at positions along a transverse direction. These wire scanners each contain three wires, mounted at different angles: "X", "Y", and 45° between "X" and "Y" to analyze coupling. Recently, a significant amount of transverse X-Y coupling was identified within wire scanner data from the Side-Coupled Linac, which has been present in data from the past decade. This realization has prompted an investigation into the wire scanner's utility as a diagnostic tool in the Fermilab Linac. This work presents efforts to better characterize the wire scanners' limitations and the phenomenon occurring in the Side-Coupled Linac.

43 PARTICLE ACCELERATORS↗

DOE OSTI2024

Structure of native four-repeat satellite III sequence with non-canonical base interactions

Abstract Tandem-repetitive DNA (where two or more DNA bases are repeated numerous times) can adopt non-canonical secondary structures. Many of these structures are implicated in important biological processes. Human Satellite III (HSat3) is enriched for tandem repeats of the sequence ATGGA and is located in pericentromeric heterochromatin in many human chromosomes. Here, we investigate the secondary structure of the four-repeat HSat3 sequence 5′-ATGGA ATGGA ATGGA ATGGA-3′ using X-ray crystallography, NMR, and biophysical methods. Circular dichroism spectroscopy, thermal stability, native PAGE, and analytical ultracentrifugation indicate that this sequence folds into a monomolecular hairpin with non-canonical base pairing and B-DNA characteristics at concentrations below 0.9 mM. NMR studies at 0.05–0.5 mM indicate that the hairpin is likely folded-over into a compact structure with high dynamics. Crystallographic studies at 2.5 mM reveal an antiparallel self-complementary duplex with the same base pairing as in the hairpin, extended into an infinite polymer. The non-canonical base pairing includes a G–G intercalation sandwiched by sheared A–G base pairs, leading to a cross-strand four guanine stack, so called guanine zipper. The guanine zippers are spaced throughout the structure by A–T/T–A base pairs. Our findings lend further insight into recurring structural motifs associated with the HSat3 and their potential biological functions.

59 BASIC BIOLOGICAL SCIENCES↗