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Huang, Kun

Publications and source records attributed to Huang, Kun.

12 records
All sourcesNASA NTRSDOE OSTI
DOE OSTI2023

A conservative Galerkin solver for the quasilinear diffusion model in magnetized plasmas

We propose a conservative Galerkin scheme for the quasilinear model in three-dimensional momentum space and three-dimensional spectral space, with cylindrical symmetry. We construct an unconditionally conservative weak form and use a discretization that preserves conservation properties independent of the wave emission probability. The discrete operators, combined with a consistent quadrature rule, preserve all the conservation laws rigorously. The proposed scheme is quite general: it works for both relativistic and non-relativistic systems, for both magnetized and unmagnetized plasmas, and even for problems with time-dependent dispersion relations. We represent the particle distribution by continuous basis functions and use discontinuous basis functions for the wave spectral energy density, which enables the application of a positivity-preserving technique. We adopt the marching simplex algorithm, designed initially for computer graphics, for numerical integration on the resonance manifold. Furthermore, the numerical examples with a bump-on-tail initial configuration show how the unstable waves produce strong momentum space diffusion.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗
DOE OSTI2019

Highly Efficient Separation/Recycling Palladium(II) Ions from Aqueous Solutions by Silica Gel-Coated Graphene Oxide Modified with Mercapto Groups

The separation and recovery of precious metals from secondary resources is an extremely important and challenging task. Herein, a novel sorbent is successfully prepared by chemical grafting and utilized for the extraction and separation of Pd(II) ions from aqueous solutions. Various characterization techniques, including Fourier transform infrared spectroscopy, scanning electron microscopy, Brunauer–Emmett–Teller, X-ray photoelectron spectroscopy, and element analysis, are employed to study the structure, morphology, porous nature, and chemical composition of the as-prepared SiO{sub 2}@GO-SH nanocomposites. The adsorption of Pd(II) ions on the SiO{sub 2}@GO-SH can be described by the pseudo-second-order model and Langmuir isotherm model. The adsorption equilibrium has been attained within 90 min and the maximum adsorption capacity of 423.2 mg g{sup −1} was attained at pH 3.5 and T = 308 K. The results reveal that SiO{sub 2}@GO-SH exhibits an excellent adsorption performance towards Pd(II) ions. In addition, we have proposed the adsorption mechanism for Pd(II) ions on the SiO{sub 2}@GO-SH surface. The adsorption of Pd(II) in SiO{sub 2}@GO-SH is a chemisorption process, where partial adsorbed Pd(II) ions are reduced to Pd(0) by functional groups (-SH) in the SiO{sub 2}@GO-SH. The results indicate that SiO{sub 2}@GO-SH can serve as a promising sorbent for the efficient separation and recovery of palladium from the palladium-containing secondary resources.

36 MATERIALS SCIENCE↗
DOE OSTI2019

Vegetation Functional Properties Determine Uncertainty of Simulated Ecosystem Productivity: A Traceability Analysis in the East Asian Monsoon Region

Global and regional projections of climate change by Earth system models are limited by their uncertain estimates of terrestrial ecosystem productivity. At the middle to low latitudes, the East Asian monsoon region has higher productivity than forests in Europe–Africa and North America, but its estimate by current generation of terrestrial biosphere models (TBMs) has seldom been systematically evaluated. Here, we developed a traceability framework to evaluate the simulated gross primary productivity (GPP) by 15 TBMs in the East Asian monsoon region. The framework links GPP to net primary productivity, biomass, leaf area and back to GPP via incorporating multiple vegetation functional properties of carbon–use efficiency (CUE), vegetation C turnover time ( τ veg ), leaf C fraction (F leaf ), specific leaf area (SLA), and leaf area index (LAI)–level photosynthesis (P LAI ), respectively. We then applied a relative importance algorithm to attribute intermodel variation at each node. The results showed that large intermodel variation in GPP over 1901–2010 were mainly propagated from their different representation of vegetation functional properties. For example, SLA explained 77% of the intermodel difference in leaf area, which contributed 90% to the simulated GPP differences. In addition, the models simulated higher CUE (18.1 ± 21.3%), τ veg (18.2 ± 26.9%), and SLA (27.4±36.5%) than observations, leading to the overestimation of simulated GPP across the East Asian monsoon region. Furthermore, these results suggest the large uncertainty of current TBMs in simulating GPP is largely propagated from their poor representation of the vegetation functional properties and call for a better understanding of the covariations between plant functional properties in terrestrial ecosystems.

54 ENVIRONMENTAL SCIENCES↗
DOE OSTI2019

Evaluating the simulated mean soil carbon transit times by Earth system models using observations

One known bias in current Earth system models (ESMs) is the underestimation of global mean soil carbon (C) transit time ( τ soil ), which quantifies the age of the C atoms at the time they leave the soil. However, it remains unclear where such underestimations are located globally. Here, we constructed a global database of measured τ soil across 187 sites to evaluate results from 12 ESMs. The observations showed that the estimated τ soil was dramatically shorter from the soil incubation studies in the laboratory environment (median = 4 years; interquartile range = 1 to 25 years) than that derived from field in situ measurements (31; 5 to 84 years) with shifts in stable isotopic C( 13 C ) or the stock-over-flux approach. In comparison with the field observations, the multi-model ensemble simulated a shorter median (19 years) anda smaller spatial variation (6 to 29 years) of τ soil across the same site locations. We then found a significant and negative linear correlation between the in situ measured τ soil and mean annual air temperature. The underestimations of modeled τ soil are mainly located in cold and dry biomes, especially tundra and desert.Furthermore, we showed that one ESM (i.e., CESM) has improved its τ soil estimate by incorporation of the soil vertical profile. These findings indicate that the spatial variation of τ soil is a useful benchmark for ESMs, and we recommend more observations and modeling efforts on soil C dynamics in regions limited by temperature and moisture.

54 ENVIRONMENTAL SCIENCES↗
DOE OSTI2018

Enhanced peak growth of global vegetation and its key mechanisms

The annual peak growth of vegetation is critical in characterizing the capacity of terrestrial ecosystem productivity and shaping the seasonality of atmospheric CO 2 concentrations. The recent greening of global lands suggests an increasing trend of terrestrial vegetation growth, but whether or not the peak growth has been globally enhanced still remains unclear. Here, we use two global datasets of gross primary productivity (GPP) and a satellite-derived Normalized Difference Vegetation Index (NDVI) to characterize recent changes in annual peak vegetation growth (that is, GPP max and NDVI max ). We demonstrate that the peak in the growth of global vegetation has been linearly increasing during the past three decades. About 65% of the NDVI max variation is evenly explained by expanding croplands (21%), rising CO 2 (22%) and intensifying nitrogen deposition (22%). The contribution of expanding croplands to the peak growth trend is substantiated by measurements from eddy-flux towers, sun-induced chlorophyll fluorescence and a global database of plant traits, all of which show that croplands have a higher photosynthetic capacity than other vegetation types. The large contribution of CO 2 is also supported by a meta-analysis of 466 manipulative experiments and 15 terrestrial biosphere models. Moreover, we show that the contribution of GPP max to the change in annual GPP is less in the tropics than in other regions. These multiple lines of evidence reveal an increasing trend in the peak growth of global vegetation. These results draw attention to the vital roles of agricultural intensification and atmospheric changes in reshaping the seasonality of global vegetation growth.

59 BASIC BIOLOGICAL SCIENCES↗
DOE OSTI2018

Proteogenomic Analysis of Surgically Resected Lung Adenocarcinoma

Despite apparently complete surgical resection, approximately half of resected early-stage lung cancer patients relapse and die of their disease. Adjuvant chemotherapy reduces this risk by only 5% to 8%. Thus, there is a need for better identifying who benefits from adjuvant therapy, the drivers of relapse, and novel targets in this setting. RNA sequencing and liquid chromatography/liquid chromatography–mass spectrometry proteomics data were generated from 51 surgically resected non–small cell lung tumors with known recurrence status. We present a rationale and framework for the incorporation of high-content RNA and protein measurements into integrative biomarkers and show the potential of this approach for predicting risk of recurrence in a group of lung adenocarcinomas. In addition, we characterize the relationship between mRNA and protein measurements in lung adenocarcinoma and show that it is outcome specific. Our results suggest that mRNA and protein data possess independent biological and clinical importance, which can be leveraged to create higher-powered expression biomarkers.

60 APPLIED LIFE SCIENCES↗
DOE OSTI2018

Prenatal phthalate exposure and placental size and shape at birth: A birth cohort study

Highlights: • This study was a prospective cohort study with a large sample size. • We evaluated the associations between throughout pregnancy phthalate exposure and placental size and shape. • We assessed the urinary concentrations of seven phthalate metabolites among 2725 pregnant women. • Prenatal phthalate exposure appeared to effect boy's placental growth. There is concern over the potential placental effects of prenatal phthalate exposure, and the potential adverse effects of prenatal phthalate exposure require further study; however, few data are available in humans. We investigated the associations between phthalate exposure in each trimester and both placental size and shape at birth.

54 ENVIRONMENTAL SCIENCES↗
DOE OSTI2017

Terrestrial ecosystem model performance in simulating productivity and its vulnerability to climate change in the northern permafrost region: Modeled Productivity in Permafrost Regions

Realistic projection of future climate-carbon (C) cycle feedbacks requires better understanding and an improved representation of the C cycle in permafrost regions in the current generation of Earth system models. Here we evaluated 10 terrestrial ecosystem models for their estimates of net primary productivity (NPP) and responses to historical climate change in permafrost regions in the Northern Hemisphere. In comparison with the satellite estimate from the Moderate Resolution Imaging Spectroradiometer (MODIS; 246 ± 6 g C m -2 yr -1 ), most models produced higher NPP (309 ± 12 g C m -2 yr -1 ) over the permafrost region during 2000–2009. By comparing the simulated gross primary productivity (GPP) with a flux tower-based database, we found that although mean GPP among the models was only overestimated by 10% over 1982–2009, there was a twofold discrepancy among models (380 to 800 g C m -2 yr -1 ), which mainly resulted from differences in simulated maximum monthly GPP (GPP max ). Most models overestimated C use efficiency (CUE) as compared to observations at both regional and site levels. Further analysis shows that model variability of GPP and CUE are nonlinearly correlated to variability in specific leaf area and the maximum rate of carboxylation by the enzyme Rubisco at 25°C (Vc max_25 ), respectively. The models also varied in their sensitivities of NPP, GPP, and CUE to historical changes in climate and atmospheric CO 2 concentration. In conclusion, these results indicate that model predictive ability of the C cycle in permafrost regions can be improved by better representation of the processes controlling CUE and GPP max as well as their sensitivity to climate change.

54 ENVIRONMENTAL SCIENCES↗
DOE OSTI2015

Dynamic generation of Ince-Gaussian modes with a digital micromirror device

Ince-Gaussian (IG) beam with elliptical profile, as a connection between Hermite-Gaussian (HG) and Laguerre-Gaussian (LG) beams, has showed unique advantages in some applications such as quantum entanglement and optical micromanipulation. However, its dynamic generation with high switching frequency is still challenging. Here, we experimentally reported the quick generation of Ince-Gaussian beam by using a digital micro-mirror device (DMD), which has the highest switching frequency of 5.2 kHz in principle. The configurable properties of DMD allow us to observe the quasi-smooth variation from LG (with ellipticity ε=0) to IG and HG (ε=∞) beam. This approach might pave a path to high-speed quantum communication in terms of IG beam. Additionally, the characterized axial plane intensity distribution exhibits a 3D mould potentially being employed for optical micromanipulation.

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗
DOE OSTI2014

Effects of truncating van der Waals interactions in lipid bilayer simulations

In membrane simulations, it is known that truncating electrostatic interactions results in artificial ordering of lipids at the truncation distance. However, less attention has been paid to the effect of truncating van der Waals (VDW) interactions. Since the VDW potential decays as r{sup −6}, it is frequently neglected beyond a cutoff of around 1 nm. In some cases, analytical dispersion corrections appropriate for isotropic systems are applied to the pressure and the potential energy. In this work, we systematically study the effect of truncating VDW interactions at different cutoffs in 1,2-Dipalmitoyl-sn-glycero-3-phosphocholine bilayers with the Berger force field. We show that the area per lipid decreases systematically when the VDW cutoff (r{sub c}) increases. This dependence persists even when dispersion corrections are applied. Since the analytical form of the dispersion correction is only appropriate for isotropic systems, we suggest that a long VDW cutoff should be used in preference over a short VDW cutoff. To determine the appropriate cutoff, we simulate liquid pentadecane with the Berger parameters and find that r{sub c} ≥ 1.4 nm is sufficient to reproduce the density and the heat of vaporization of pentadecane. Bilayers simulated with r{sub c} ≥ 1.4 nm show an improved agreement with experiments in both the form factors and the deuterium order parameters. Finally, we report that the VDW cutoff has a significant impact on the lipid flip-flop energetics and an inappropriate short VDW cutoff results in a bilayer that is prone to form water defects across the bilayer.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗