Engineering topics

Iris Irby

Publications and source records attributed to Iris Irby.

3 records

NASA NTRS2023

Microbial Adaptation to Spaceflight Is Correlated With Bacteriophage-Encoded Functions

Evidence from the International Space Station suggests microbial populations are rapidly adapting to the spacecraft environment; however, the mechanism of this adaptation is not understood. Bacteriophages are prolific mediators of bacterial adaptation on Earth. Here we survey 245 genomes sequenced from bacterial strains isolated on the International Space Station for dormant (lysogenic) bacteriophages. Our analysis indicates phage-associated genes are significantly different between spaceflight strains and their terrestrial counterparts. Additionally, we identify 283 complete prophages, those that could initiate bacterial lysis and infect additional hosts, of which 21% are novel. These prophage regions encode functions that correlate with increased persistence in extreme environments, such as spaceflight, to include antimicrobial resistance and virulence, DNA damage repair, and dormancy. Our results correlate microbial adaptation in spaceflight to bacteriophage-encoded functions that may impact human health in spaceflight.

Space Biology↗

NASA NTRSDate not supplied

Immunological Consequences of the Spaceflight Environment on Macrophage Function

The role of macrophages in the protection of multicellular organisms is critical and multifaceted.Regulation of macrophage populations and functions is key to maintaining tissue home ostasis and a healthy organism. As the bridge between the innate and adaptive immune systems, macrophages patrol every tissue in the body and show remarkable heterogeneity. Primarily, macrophages phagocytose harmful pathogens and release cytokines to regulate pro-inflammatory responses to infections and anti-inflammatory responses for wound healing. Prior research has demonstrated that spaceflight conditions, including microgravity and deep space radiation, have a detrimental effect on macrophage populations and functions. However, tissue-specific and individual spaceflight stressor-specific effects remain to be untangled. Furthermore, prior research into the effects of spaceflight on macrophages lacks experimental standardization, creating difficulty in reconciling disparate studies. Finally, due to their presence in various human tissues, easy accessibility in the bloodstream, and fast responses to immune status and spaceflight, macrophages present a unique opportunity for developing new diagnostic tools for spaceflight applications. Therefore, further targeted research on macrophage functions may support astronaut health in long-duration crewed space missions, both within and beyond lowEarth orbit. Here we present a review that summarizes previous findings on macrophagedys regulation in spaceflight, details key areas for further research and investment, and recommends potential investigations into spaceflight dysfunctions, diagnostics, and countermeasures.

immunology↗

NASA NTRSDate not supplied

Investigation of Prophage Regions of Bacterial Strains Isolated from the International Space Station (ISS)

Space flight agencies are planning missions back to the Moon and to Mars. When sending humans into space, it is impossible to separate them from microorganisms, either in their associated microbiome or in the spacecraft environment, which are modified through the movement of genetic material. Bacteriophages, small viruses that invade and replicate within bacterial cells, play a central role in the genetic composition and evolution of microorganisms. Lysogenic bacteriophages can insert themselves into the DNA of their bacterial hosts, forming prophage regions, which can also transfer genes from previous hosts. Thus, we aimed to identify and classify all prophages from twelve bacterial species cultured from the International Space Station (ISS) from 2017 to 2018. We determined representative bacterial strains for each species, whose genomes were analyzed to identify prophage regions. Complete prophages were identified through database searches and the number of prophage regions were compared to terrestrial analogs. Additionally, prophage region and genome sizes were compared for each species, identifying the percentage of bacteriophage DNA in each genome. We determined that the prophage-susceptible bacterial species isolated from the ISS had a higher number of prophage regions when compared to terrestrial analogs, as well as having a larger percentage of their genomes made up of prophage material. Of the eighteen complete prophages identified, 72.2% were of family Siphoviridae and 27.8% were of family Myoviridae. Only one of the prophages had a BLAST similarity over 80%, suggesting that the remainder of prophages are novel species. These results imply that there is a higher rate of prophage transduction and lysogeny during spaceflight, and that the prophages present are novel.

Phage↗