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Just, Allan C.

Publications and source records attributed to Just, Allan C..

Accelerated epigenetic aging as a risk factor for chronic obstructive pulmonary disease and decreased lung function in two prospective cohort studies

Chronic obstructive pulmonary disease (COPD) is a frequent diagnosis in older individuals and contributor to global morbidity and mortality. Given the link between lung disease and aging, we need to understand how molecular indicators of aging relate to lung function and disease. Using data from the population-based KORA (Cooperative Health Research in the Region of Augsburg) surveys, we associated baseline epigenetic (DNA methylation) age acceleration with incident COPD and lung function. Models were adjusted for age, sex, smoking, height, weight, and baseline lung disease as appropriate. Associations were replicated in the Normative Aging Study. Of 770 KORA participants, 131 developed incident COPD over 7 years. Baseline accelerated epigenetic aging was significantly associated with incident COPD. The change in age acceleration (follow-up – baseline) was more strongly associated with COPD than baseline aging alone. The association between the change in age acceleration between baseline and follow-up and incident COPD replicated in the Normative Aging Study. Associations with spirometric lung function parameters were weaker than those with COPD, but a meta-analysis of both cohorts provide suggestive evidence of associations. Accelerated epigenetic aging, both baseline measures and changes over time, may be a risk factor for COPD and reduced lung function.

60 APPLIED LIFE SCIENCES↗

DSCOVR-EPIC MAIAC AOD - A Proxy for Understanding Aerosol Diurnal Patterns from Space

The Deep Space Climate Observatory (DSCOVR) spacecraft was launched on 11 February 2015 and in June 2015 achieved its orbit at the first Lagrange point (L1), 1.5 million km from Earth toward the sun. The Earth Polychromatic Imaging Camera (EPIC) onboard DSCOVR views the entire sunlit Earth from sunrise to sunset, every 1-2 hours, at scattering angles between 168.5° and 175.5° with 10 narrowband filters in the range of 317-779 nm. NASA Multiangle Implementation of Atmospheric Correction (MAIAC) algorithm, originally developed for MODIS, has been applied to EPIC data with an Aerosol Optical Depth (AOD) product at 440nm with a 10km spatial resolution. This high temporal resolution product is a unique dataset for investigating diurnal patterns in aerosols from space. Our work analyzed the capability of the satellite-borne data to capture the aerosol diurnal variation by associating it with AERONET AOD at 440nm data over the contiguous US. We validated the DSCOVR MAIAC AOD data over 100 AERONET stations during 2015-2018, and examined the contribution of the surface reflectance and relevant acquisition angles, derived by the MAIAC algorithm, to the predicted error. We used over 180,000 hourly DSCOVR-EPIC MAIAC AOD observations with collocated with AERONET AOD observations averaged over +-30 minutes from the satellite overpass time. The AERONET and DSCOVR AOD temporal patterns show that the diurnal variation is different across US AERONET sites, with higher diurnal variation in the DSCOVR dataset in general.

Sorek-Hamer, Meytar↗

A New Hybrid Spatio-temporal Model for Estimating Daily Multi-year PM2.5 Concentrations Across Northeastern USA Using High Resolution Aerosol Optical Depth Data

The use of satellite-based aerosol optical depth (AOD) to estimate fine particulate matter PM(sub 2.5) for epidemiology studies has increased substantially over the past few years. These recent studies often report moderate predictive power, which can generate downward bias in effect estimates. In addition, AOD measurements have only moderate spatial resolution, and have substantial missing data. We make use of recent advances in MODIS satellite data processing algorithms (Multi-Angle Implementation of Atmospheric Correction (MAIAC), which allow us to use 1 km (versus currently available 10 km) resolution AOD data.We developed and cross validated models to predict daily PM(sub 2.5) at a 1X 1 km resolution across the northeastern USA (New England, New York and New Jersey) for the years 2003-2011, allowing us to better differentiate daily and long term exposure between urban, suburban, and rural areas. Additionally, we developed an approach that allows us to generate daily high-resolution 200 m localized predictions representing deviations from the area 1 X 1 km grid predictions. We used mixed models regressing PM(sub 2.5) measurements against day-specific random intercepts, and fixed and random AOD and temperature slopes. We then use generalized additive mixed models with spatial smoothing to generate grid cell predictions when AOD was missing. Finally, to get 200 m localized predictions, we regressed the residuals from the final model for each monitor against the local spatial and temporal variables at each monitoring site. Our model performance was excellent (mean out-of-sample R(sup 2) = 0.88). The spatial and temporal components of the out-of-sample results also presented very good fits to the withheld data (R(sup 2) = 0.87, R(sup)2 = 0.87). In addition, our results revealed very little bias in the predicted concentrations (Slope of predictions versus withheld observations = 0.99). Our daily model results show high predictive accuracy at high spatial resolutions and will be useful in reconstructing exposure histories for epidemiological studies across this region.

Air pollution↗