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Katz, Daniel

Publications and source records attributed to Katz, Daniel.

Fungal Spore Seasons Advanced Across the US Over Two Decades of Climate Change

Abstract Phenological shifts due to climate change have been extensively studied in plants and animals. Yet, the responses of fungal spores—organisms important to ecosystems and major airborne allergens—remain understudied. This knowledge gap limits our understanding of their ecological and public health implications. To address this, we analyzed a long‐term (2003–2022), large‐scale (the continental US) data set of airborne fungal spores collected by the US National Allergy Bureau. We first pre‐processed the spore data by gap‐filling and smoothing. Afterward, we extracted 10 metrics describing the phenology (e.g., start and end of season) and intensity (e.g., peak concentration and integral) of fungal spore seasons. These metrics were derived using two complementary but not mutually exclusive approaches—ecological and public health approaches, defined as percentiles of total spore concentration and allergenic thresholds of spore concentration, respectively. Using linear mixed‐effects models, we quantified annual shifts in these metrics across the continental US. We revealed a significant advancement in the onset of the spore seasons defined in both ecological (11 days, 95% confidence interval: 0.4–23 days) and public health (22 days, 6–38 days) approaches over two decades. Meanwhile, total spore concentrations in an annual cycle and in a spore allergy season tended to decrease over time. The earlier start of the spore season was significantly correlated with climatic variables, such as warmer temperatures and altered precipitations. Overall, our findings suggest possible climate‐driven advanced fungal spore seasons, highlighting the importance of climate change mitigation and adaptation in public health decision‐making.

Environmental Sciences & Ecology↗

Atmospheric Ion Composition, SGP, April-May 2023

These files contain select ion count rates measured by an atmospheric pressure interface time-of-flight mass spectrometer (APi-ToF) at the Atmospheric Radiation Measurement Southern Great Plains site from April 28, 2023 to May 31, 2023. Files are in ICARTT format. The APi-ToF measures the chemical composition of naturally charged ions using mass spectrometry. Due to the nature of the measurements, time-series data are non-quantitative. This dataset contains time-series information for the ions that are typically the most intense ions observed.

54 ENVIRONMENTAL SCIENCES↗

Boundary-Layer Gradients in New Particle Formation Field Campaign Report

Atmospheric new particle formation (NPF) followed by growth of the particles to ~50-150 nm is estimated to account for over 50% of the particles that can activate cloud droplets. As such, NPF and the subsequent growth plays a critical role in our ability to understand how aerosols affect cloud life cycle, properties, and processes and more generally the Earth’s radiative balance. NPF and growth is known to occur throughout the troposphere including in both the boundary layer and the free troposphere. The majority of NPF and growth observations, however, come from surface-based measurements within the boundary layer. Measurements of the vertical distribution of NPF and growth are sparse and thus insufficient to test many of the hypotheses that attempt to explain connections between NPF and boundary-layer transport and meteorology. The purpose of this campaign was to investigate the vertical distribution of NPF and growth at the U.S. Department of Energy Atmospheric Radiation Measurement (ARM) user facility’s Southern Great Plains (SGP) observatory.

54 ENVIRONMENTAL SCIENCES↗

Photonically active bowtie nanoassemblies with chirality continuum

Chirality is a geometrical property described by continuous mathematical functions. However, in chemical disciplines, chirality is often treated as a binary left or right characteristic of molecules rather than a continuity of chiral shapes. Although they are theoretically possible, a family of stable chemical structures with similar shapes and progressively tuneable chirality is yet unknown. Here we show that nanostructured microparticles with an anisotropic bowtie shape display chirality continuum and can be made with widely tuneable twist angle, pitch, width, thickness and length. The self-limited assembly of the bowties enables high synthetic reproducibility, size monodispersity and computational predictability of their geometries for different assembly conditions. The bowtie nanoassemblies show several strong circular dichroism peaks originating from absorptive and scattering phenomena. Unlike classical chiral molecules, these particles show a continuum of chirality measures that correlate exponentially with the spectral positions of the circular dichroism peaks. Finally, Bowtie particles with variable polarization rotation were used to print photonically active metasurfaces with spectrally tuneable positive or negative polarization signatures for light detection and ranging (LIDAR) devices.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Montage Version 3.0

The final version (3.0) of the Montage software has been released. To recapitulate from previous NASA Tech Briefs articles about Montage: This software generates custom, science-grade mosaics of astronomical images on demand from input files that comply with the Flexible Image Transport System (FITS) standard and contain image data registered on projections that comply with the World Coordinate System (WCS) standards. This software can be executed on single-processor computers, multi-processor computers, and such networks of geographically dispersed computers as the National Science Foundation s TeraGrid or NASA s Information Power Grid. The primary advantage of running Montage in a grid environment is that computations can be done on a remote supercomputer for efficiency. Multiple computers at different sites can be used for different parts of a computation a significant advantage in cases of computations for large mosaics that demand more processor time than is available at any one site. Version 3.0 incorporates several improvements over prior versions. The most significant improvement is that this version is accessible to scientists located anywhere, through operational Web services that provide access to data from several large astronomical surveys and construct mosaics on either local workstations or remote computational grids as needed.

Jacob, Joseph↗

Generating Mosaics of Astronomical Images

"Montage" is the name of a service of the National Virtual Observatory (NVO), and of software being developed to implement the service via the World Wide Web. Montage generates science-grade custom mosaics of astronomical images on demand from input files that comply with the Flexible Image Transport System (FITS) standard and contain image data registered on projections that comply with the World Coordinate System (WCS) standards. "Science-grade" in this context signifies that terrestrial and instrumental features are removed from images in a way that can be described quantitatively. "Custom" refers to user-specified parameters of projection, coordinates, size, rotation, and spatial sampling. The greatest value of Montage is expected to lie in its ability to analyze images at multiple wavelengths, delivering them on a common projection, coordinate system, and spatial sampling, and thereby enabling further analysis as though they were part of a single, multi-wavelength image. Montage will be deployed as a computation-intensive service through existing astronomy portals and other Web sites. It will be integrated into the emerging NVO architecture and will be executed on the TeraGrid. The Montage software will also be portable and publicly available.

Bergou, Attila↗

Evaluating Performance of Components

Parallel Component Performance Benchmarks is a computer program developed to aid the evaluation of the Common Component Architecture (CCA) - a software architecture, based on a component model, that was conceived to foster high-performance computing, including parallel computing. More specifically, this program compares the performances (principally by measuring computing times) of componentized versus conventional versions of the Parallel Pyramid 2D Adaptive Mesh Refinement library - a software library that is used to generate computational meshes for solving physical problems and that is typical of software libraries in use at NASA s Jet Propulsion Laboratory.

Katz, Daniel↗

PVM Wrapper

PVM Wrapper is a software library that makes it possible for code that utilizes the Parallel Virtual Machine (PVM) software library to run using the message-passing interface (MPI) software library, without needing to rewrite the entire code. PVM and MPI are the two most common software libraries used for applications that involve passing of messages among parallel computers. Since about 1996, MPI has been the de facto standard. Codes written when PVM was popular often feature patterns of {"initsend," "pack," "send"} and {"receive," "unpack"} calls. In many cases, these calls are not contiguous and one set of calls may even exist over multiple subroutines. These characteristics make it difficult to obtain equivalent functionality via a single MPI "send" call. Because PVM Wrapper is written to run with MPI- 1.2, some PVM functions are not permitted and must be replaced - a task that requires some programming expertise. The "pvm_spawn" and "pvm_parent" function calls are not replaced, but a programmer can use "mpirun" and knowledge of the ranks of parent and child tasks with supplied macroinstructions to enable execution of codes that use "pvm_spawn" and "pvm_parent."

Katz, Daniel↗

Software for Fault-Tolerant Matrix Multiplication

Formal Linear Algebra Recovery Environment is a computer program for high-performance, fault-tolerant matrix multiplication. The program is based on an extension of the prior theory and practice of fault-tolerant matrix matrix multiplication of the form C = AB. This extension provides low-overhead methods for detecting errors, not only in C, but also in A and/or B. These methods enable the detection of all errors as long as, in a given case, only one entry in A, B, or C is corrupted. The program also provides for following a low-overhead rollback approach to correct errors once detected. Results of computational experiments have demonstrated that the methods implemented in this program work well in practice while imposing an acceptably low level of overhead, relative to high-performance matrix-multiplication methods that do not afford fault tolerance.

Katz, Daniel↗