Engineering topics

Kirsch, Michael

Publications and source records attributed to Kirsch, Michael.

4 records

DOE OSTI2021

Evolution of the SARS-CoV -2 proteome in three dimensions (3D) during the first 6 months of the COVID -19 pandemic

Understanding the molecular evolution of the SARS-CoV-2 virus as it continues to spread in communities around the globe is important for mitigation and future pandemic preparedness. Three-dimensional structures of SARS-CoV-2 proteins and those of other coronavirusess archived in the Protein Data Bank were used to analyze viral proteome evolution during the first 6 months of the COVID-19 pandemic. Analyses of spatial locations, chemical properties, and structural and energetic impacts of the observed amino acid changes in >48 000 viral isolates revealed how each one of 29 viral proteins have undergone amino acid changes. Catalytic residues in active sites and binding residues in protein–protein interfaces showed modest, but significant, numbers of substitutions, highlighting the mutational robustness of the viral proteome. Energetics calculations showed that the impact of substitutions on the thermodynamic stability of the proteome follows a universal bi-Gaussian distribution. Here detailed results are presented for potential drug discovery targets and the four structural proteins that comprise the virion, highlighting substitutions with the potential to impact protein structure, enzyme activity, and protein–protein and protein–nucleic acid interfaces. Characterizing the evolution of the virus in three dimensions provides testable insights into viral protein function and should aid in structure-based drug discovery efforts as well as the prospective identification of amino acid substitutions with potential for drug resistance.

59 BASIC BIOLOGICAL SCIENCES↗

NASA NTRS2009

NESC Review of the 8-Foot High Temperature Tunnel (HTT) Oxygen Storage Pressure Vessel Inspection Requirements

The 8-Foot HTT (refer to Figure 4.0-1) is used to conduct tests of air-breathing hypersonic propulsion systems at Mach numbers 4, 5, and 7. Methane, Air, and LOX are mixed and burned in a combustor to produce test gas stream containing 21 percent by volume oxygen. The NESC was requested by the NASA LaRC Executive Safety Council to review the rationale for a proposed change to the recertification requirements, specifically the internal inspection requirements, of the 8-Foot HTT LOX Run Tank and LOX Storage Tank. The Run Tank is an 8,000 gallon cryogenic tank used to provide LOX to the tunnel during operations, and is pressured during the tunnel run to 2,250 pounds per square inch gage (psig). The Storage Tank is a 25,000 gallon cryogenic tank used to store LOX at slightly above atmospheric pressure as a external shell, with space between the shells maintained under vacuum conditions.

Gilbert, Michael↗

NASA NTRS2004

Hyper-X Post-Flight Trajectory Reconstruction

This paper discusses the formulation and development of a trajectory reconstruction tool for the NASA X{43A/Hyper{X high speed research vehicle, and its implementation for the reconstruction and analysis of ight test data. Extended Kalman ltering techniques are employed to reconstruct the trajectory of the vehicle, based upon numerical integration of inertial measurement data along with redundant measurements of the vehicle state. The equations of motion are formulated in order to include the effects of several systematic error sources, whose values may also be estimated by the ltering routines. Additionally, smoothing algorithms have been implemented in which the nal value of the state (or an augmented state that includes other systematic error parameters to be estimated) and covariance are propagated back to the initial time to generate the best-estimated trajectory, based upon all available data. The methods are applied to the problem of reconstructing the trajectory of the Hyper-X vehicle from ight data.

Karlgaard, Christopher D.↗

NASA NTRS2003

Infrared Thermography Flight Experimentation

Analysis was done on IR data collected by DFRC on May 8, 2002. This includes the generation of a movie to initially examine the IR flight data. The production of the movie was challenged by the volume of data that needed to be processed, namely 40,500 images with each image (256 x 252) containing over 264 million points (pixel depth 4096). It was also observed during the initial analysis that the RTD surface coating has a different emissivity than the surroundings. This fact added unexpected complexity in obtaining a correlation between RTD data and IR data. A scheme was devised to generate IR data near the RTD location which is not affected by the surface coating This scheme is valid as long as the surface temperature as measured does not change too much over a few pixel distances from the RTD location. After obtaining IR data near the RTD location, it is possible to make a direct comparison with the temperature as measured during the flight after adjusting for the camera s auto scaling. The IR data seems to correlate well to the flight temperature data at three of the four RID locations. The maximum count intensity occurs closely to the maximum temperature as measured during flight. At one location (RTD #3), there is poor correlation and this must be investigated before any further progress is possible. However, with successful comparisons at three locations, it seems there is great potential to be able to find a calibration curve for the data. Moreover, as such it will be possible to measure temperature directly from the IR data in the near future.

Blanchard, Robert C.↗