Engineering topics

Newcomer, Michelle E.

Publications and source records attributed to Newcomer, Michelle E..

12 records

DOE OSTI2024

Cities Are Concentrators of Complex, MultiSectoral Interactions Within the Human-Earth System

Cities are concentrators of complex, multi-sectoral interactions. As keystones in the interconnected human-Earth system, cities have an outsized impact on the Earth system. We describe a multi-lens framework for organizing our understanding of the complexity of urban systems and scientific research on urban systems, which may be useful for natural system scientists exploring the ways their work can be made more actionable. We then describe four critical dimensions along which improvements are needed to advance the urban research that addresses urgent climate challenges: (a) solutions-oriented research, (b) equity-centered assessments which rely on fine-scale human and ecological data, (c) co-production of knowledge, and (d) better integration of human and natural systems occurring through theory, observation, and modeling.

54 ENVIRONMENTAL SCIENCES↗

DOE OSTI2024

Effects of spatial variability in vegetation phenology, climate, landcover, biodiversity, topography, and soil property on soil respiration across a coastal ecosystem

Coastal terrestrial-aquatic interfaces (TAIs) are crucial contributors to global biogeochemical cycles and carbon exchange. A systematic evaluation of the interaction between coastal catchment properties and carbon dioxide (CO2) emission by soil respiration is significant for assessing carbon dynamics and predicting the future trajectory of atmospheric CO2 concentrations in coastal TAIs. The soil CO2 efflux in these transition zones is however poorly understood due to the high spatiotemporal dynamics of TAIs, as various sub-ecosystems in this region are compressed and expanded by complex influences of tides, changes in river levels, climate, and land use. We focus on the Chesapeake Bay region to (i) investigate the spatial heterogeneity of the coastal ecosystem and identify spatial zones with similar environmental characteristics based on the spatial data layers, including vegetation index (kNDVI), climate, landcover, diversity, topography, soil property, and relative tidal elevation; (ii) understand the primary driving factors affecting soil respiration within sub-ecosystems of the coastal ecosystem. Specifically, we employed hierarchical clustering analysis to identify spatial regions with distinct environmental characteristics, followed by the determination of main driving factors using Random Forest regression and SHapley Additive exPlanations. Maximum and minimum temperature are the main drivers common to all sub-ecosystems, while each region also has additional unique major drivers that differentiate them from one another. Precipitation exerts an influence on vegetated lands, while soil pH value holds importance specifically in forested lands. In croplands characterized by high clay content and low sand content, the significant role is attributed to bulk density. Wetlands demonstrate the importance of both elevation and sand content, with clay content being more relevant in non-inundated wetlands than in inundated wetlands. The topographic wetness index significantly contributes to the mixed vegetation areas, including shrub, grass, pasture, and forest. Additionally, our research reveals that dense vegetation land covers and urban/developed areas exhibit distinct soil property drivers. Overall, there is no one-size-fits-all approach to modeling carbon fluxes in coastal TAIs, and our study highlights the importance of further research and monitoring practices to improve our understanding of carbon dynamics and promote the sustainable management of coastal TAIs.

54 ENVIRONMENTAL SCIENCES↗

DOE OSTI2023

Prolonged Drought in a Northern California Coastal Region Suppresses Wildfire Impacts on Hydrology

Wildfires naturally occur in many landscapes, however they are undergoing rapid regime shifts. Despite the emphasis in the literature on the most severe hydrological responses to wildfire, there remains a knowledge gap on the thresholds of wildfire (i.e., burned area/drainage area ratio, BAR) required to initiate hydrological responses. We investigated hydrological changes in the Russian River Watershed (RRW) in California, a coastal, Mediterranean, drought-prone, wildfire-adapted ecosystem, following ten wildfires that burned 30% of the watershed. Our findings suggest that sub-watersheds of the RRW have not burned beyond an intrinsic, unknown, threshold required to initiate change. Using paired watersheds, we examined spatiotemporal patterns of pre-and-post wildfire hydrology with a rainfall-runoff hydrological model. Even though these successive wildfires burned 1%–50% of each sub-watershed (1%–30% at moderate/high severity), we found little evidence of wildfire-related shifts in hydrology. As a function of BAR, wildfire imposed limited effects on runoff ratios (runoff/precipitation) and runoff residuals (observations—model simulations). Our findings that post-wildfire runoff enhancements asymptote beyond 30% burn indicate that when a watershed is burned beyond a certain threshold, the magnitude of the hydrologic response no longer increases. Drought and storm conditions explained much of the variability observed in streamflow, whereas wildfire explained only moderate variability in streamflow even when wildfire accounted for >45% BAR. While the BAR in the RRW was sufficiently beyond previously reported minimum disturbance thresholds (>20% burned forest), the lack of hydrological response is attributed to buffering effects of wildfire adaptation and drought factors that are unique to Mediterranean ecoregions.

Newcomer, Michelle E.↗

DOE OSTI2022

Data used in “Enguehard et al. 2022, Machine-Learning Functional Zonation Approach for Characterizing Terrestrial–Aquatic Interfaces: Application to Lake Erie”

The package contains the data layers used in “Enguehard et al. 2022, Machine-Learning Functional Zonation Approach for Characterizing Terrestrial–Aquatic Interfaces: Application to Lake Erie”. Spatial data layers include: topography, wetland vegetation cover, time series of Landsat’s enhanced vegetation index (EVI) between 1990 and 2020. The study aims to characterize coastal wetlands with particular focus on the co-variability between plant dynamics, topography, soil, and other environmental factors. We proposed a functional zonation approach based on machine learning clustering to identify the spatial regions, i.e., zones that capture these co-varied properties. This approach was applied to publicly available datasets along Lake Erie, in the Great Lakes Region

54 ENVIRONMENTAL SCIENCES↗

DOE OSTI2022

Variability of Snow and Rainfall Partitioning Into Evapotranspiration and Summer Runoff Across Nine Mountainous Catchments

Abstract Understanding the partitioning of snow and rain contributing to either catchment streamflow or evapotranspiration (ET) is of critical relevance for water management in response to climate change. To investigate this partitioning, we use endmember splitting and mixing analyses based on stable isotope ( 18 O) data from nine headwater catchments in the East River, Colorado. Our results show that one third of the snow partitions to ET and 13% of the snowmelt sustains summer streamflow. Only 8% of the rainfall contributes to the summer streamflow, because most of the rain (67%) partitions to ET. The spatial variability of precipitation partitioning is mainly driven by aspect and tree cover across the sub‐catchments. Catchments with higher tree cover have a higher share of snow becoming ET, resulting in less snow in summer streamflow. Summer streamflow did not contain more rain with higher rainfall sums, but more rain was taken up in ET.

58 GEOSCIENCES↗

DOE OSTI2021

A novel random forest approach to revealing interactions and controls on chlorophyll concentration and bacterial communities during coastal phytoplankton blooms

Abstract Increasing occurrence of harmful algal blooms across the land–water interface poses significant risks to coastal ecosystem structure and human health. Defining significant drivers and their interactive impacts on blooms allows for more effective analysis and identification of specific conditions supporting phytoplankton growth. A novel iterative Random Forests (iRF) machine-learning model was developed and applied to two example cases along the California coast to identify key stable interactions: (1) phytoplankton abundance in response to various drivers due to coastal conditions and land-sea nutrient fluxes, (2) microbial community structure during algal blooms. In Example 1, watershed derived nutrients were identified as the least significant interacting variable associated with Monterey Bay phytoplankton abundance. In Example 2, through iRF analysis of field-based 16S OTU bacterial community and algae datasets, we independently found stable interactions of prokaryote abundance patterns associated with phytoplankton abundance that have been previously identified in laboratory-based studies. Our study represents the first iRF application to marine algal blooms that helps to identify ocean, microbial, and terrestrial conditions that are considered dominant causal factors on bloom dynamics.

59 BASIC BIOLOGICAL SCIENCES↗

DOE OSTI2021

Meanders as a scaling motif for understanding of floodplain soil microbiome and biogeochemical potential at the watershed scale

Abstract Background Biogeochemical exports from watersheds are modulated by the activity of microorganisms that function over micron scales. Here, we tested the hypothesis that meander-bound regions share a core microbiome and exhibit patterns of metabolic potential that broadly predict biogeochemical processes in floodplain soils along a river corridor. Results We intensively sampled the microbiomes of floodplain soils located in the upper, middle, and lower reaches of the East River, Colorado. Despite the very high microbial diversity and complexity of the soils, we reconstructed 248 quality draft genomes representative of subspecies. Approximately one third of these bacterial subspecies was detected across all three locations at similar abundance levels, and ~ 15% of species were detected in two consecutive years. Within the meander-bound floodplains, we did not detect systematic patterns of gene abundance based on sampling position relative to the river. However, across meanders, we identified a core floodplain microbiome that is enriched in capacities for aerobic respiration, aerobic CO oxidation, and thiosulfate oxidation with the formation of elemental sulfur. Given this, we conducted a transcriptomic analysis of the middle floodplain. In contrast to predictions made based on the prominence of gene inventories, the most highly transcribed genes were relatively rare amoCAB and nxrAB (for nitrification) genes, followed by genes involved in methanol and formate oxidation, and nitrogen and CO 2 fixation. Within all three meanders, low soil organic carbon correlated with high activity of genes involved in methanol, formate, sulfide, hydrogen, and ammonia oxidation, nitrite oxidoreduction, and nitrate and nitrite reduction. Overall, the results emphasize the importance of sulfur, one-carbon and nitrogen compound metabolism in soils of the riparian corridor. Conclusions The disparity between the scale of a microbial cell and the scale of a watershed currently limits the development of genomically informed predictive models describing watershed biogeochemical function. Meander-bound floodplains appear to serve as scaling motifs that predict aggregate capacities for biogeochemical transformations, providing a foundation for incorporating riparian soil microbiomes in watershed models. Widely represented genetic capacities did not predict in situ activity at one time point, but rather they define a reservoir of biogeochemical potential available as conditions change.

54 ENVIRONMENTAL SCIENCES↗

DOE OSTI2021

Hysteresis Patterns of Watershed Nitrogen Retention and Loss Over the Past 50 years in United States Hydrological Basins

Patterns of watershed nitrogen (N) retention and loss are shaped by how watershed biogeochemical processes retain, biogeochemically transform, and lose incoming atmospheric deposition of N. Loss patterns represented by concentration, discharge, and their associated stream exports are important indicators of integrated watershed N retention behaviors. We examined continental United States (CONUS) scale N deposition (e.g., wet and dry atmospheric deposition), vegetation trends, and stream trends as potential indicators of watershed N-saturation and retention conditions, and how watershed N retention and losses vary over space and time. By synthesizing changes and modalities in watershed nitrogen loss patterns based on stream data from 2200 U.S. watersheds over a 50 years record, our work revealed two patterns of watershed N-retention and loss. One was a hysteresis pattern that reflects the integrated influence of hydrology, atmospheric inputs, land-use, stream temperature, elevation, and vegetation. The other pattern was a one-way transition to a new state. We found that regions with increasing atmospheric deposition and increasing vegetation health/biomass patterns have the highest N-retention capacity, become increasingly N-saturated over time, and are associated with the strongest declines in stream N exports—a pattern, that is, consistent across all land cover categories. We provide a conceptual model, validated at an unprecedented scale across the CONUS that links instream nitrogen signals to upstream mechanistic landscape processes. Our work can aid in the future interpretation of in-stream concentrations of DOC and DIN as indicators of watershed N-retention status and integrators of watershed hydrobiogeochemical processes.

58 GEOSCIENCES↗

DOE OSTI2021

Modeling the Impact of Riparian Hollows on River Corridor Nitrogen Exports

Recent studies in snowmelt-dominated catchments have documented changes in nitrogen (N) retention over time, such as declines in watershed exports of N, though there is a limited understanding of the controlling processes driving these trends. Working in the mountainous headwater East River Colorado watershed, we explored the effects of riparian hollows as N-cycling hotspots and as important small-scale controls on observed watershed trends. Using a modeling-based approach informed by remote sensing and in situ observations, we simulated the N-retention capacity of riparian hollows with seasonal and yearly hydrobiogeochemical perturbations imposed as drivers. We then implemented a scaling approach to quantify the relative contribution of riparian hollows to the total river corridor N budget. We found that riparian hollows primarily serve as N sinks, with N-transformation rates significantly limited by periods of enhanced groundwater upwelling and promoted at the onset of rainfall events. Given these observed hydrologic controls, we expect that the nitrate ( NO 3 - ) sink capacity of riparian hollows will increase in magnitude with future climatic perturbations, specifically the shift to more frequent rainfall events and fewer snowmelt events, as projected for many mountainous headwater catchments. Our current estimates suggest that while riparian hollows provision ~5–20% of NO 3 - to the river network, they functionally act as inhibitors to upland NO 3 - reaching the stream. Our work linking transient hydrological conditions to numerical biogeochemical simulations is an important step in assessing N-retaining features relative to the watershed N budget and better understanding the role of small-scale features within watersheds.

54 ENVIRONMENTAL SCIENCES↗

DOE OSTI2021

A Fire Community Observatory: Interdisciplinary, AI-informed Post-Fire Rapid Response for Improved Water Cycle Science at Watershed Scale

Wildfire is an ecological disturbance that disrupts the hydrological cycle. In the past few years, a record number of multiple-and-compounding fires have occurred across urban-wildland gradients in the Western United States. Changes to watershed hydrological partitioning in response to fires (infiltration, runoff, evapotranspiration) presents unprecedented challenges to “Water-in-the-West” through negative impacts to water supply and its quality, and is a direct threat to downstream communities, groundwater, and drinking water supply infrastructure. While much work is being done to advance Artificial Intelligence and Machine Learning (AI/ML) use during fires for emergency response (i.e. predict fire movement, direct evacuations), significant potential exists to use AI/ML to address three scientific grand challenges that are rarely addressed in a convergent science context: 1) how to enhance the potential resiliency of a landscape before fire(s), 2) how to cost-effectively and optimally monitor watershed changes after fires, and 3) how to predict future hydrological and biogeochemical trajectories in fire-impacted watershed given climate change. This whitepaper addresses DOE Focal Area 1: Data acquisition and assimilation enabled by machine learning, AI, and advanced methods.

58 GEOSCIENCES↗

DOE OSTI2021

Nitrate, ammonium, and DON mass time series output for East River stream, vadose zone and groundwater subwatersheds from HAN-SoMo model

There is a growing understanding of the role that bedrock weathering can play as a source of nitrogen (N) to soils, groundwater and river systems. The significance is particularly apparent in mountainous environments where weathering fluxes can be large. However, our understanding of the relative contributions of rock-derived, or geogenic, N to the total N supply of mountainous watersheds remains poorly understood. This dataset contains model output from the High-Altitude Nitrogen Suite of Models (HAN-SoMo), a watershed-scale ensemble of process-based models to quantify the relative sources, transformations, and sinks of geogenic and atmospheric N through a mountain watershed. Our study is based in the East River Watershed (ERW) in the Upper Colorado River Basin. The East River is a near-pristine headwater watershed underlain primarily by an N-rich Mancos Shale bedrock, enabling the timing and magnitude of geogenic and atmospheric contributions to watershed scale dissolved N-exports to be quantified. Six calibration scenarios were developed to explore equifinality using >1600 N concentration measurements from streams, groundwater, and vadose zone samples collected over the course of four years across the watershed, from 2014-2018. The files in this dataset are named according to which calibration scenario they represent (1, 2, 3, NM1, NM2, and NC), and include daily time series model output of nitrate, ammonium and dissolved organic nitrogen concentrations for all six calibration scenarios described in Maavara et al., 2021, "Modeling geogenic and atmospheric nitrogen through the East River Watershed, Colorado Rocky Mountains," PLOS One (in press), for the stream, vadose zone, and groundwater in the five discretized subwatersheds: Rustlers Gulch, Copper Creek, East above Quigley (EAQ), the Middle East River (ME), and Lower Triangle (LT) from Gothic to the Pumphouse. The READ_ME.txt file includes details on units and naming conventions in each of these files. Model files are in .mat format, to be opened in MATLAB.

54 ENVIRONMENTAL SCIENCES↗

NASA NTRS2012

NASA Ames DEVELOP Interns Collaborate with the South Bay Salt Pond Restoration Project to Monitor and Study Restoration Efforts using NASA's Satellites

In the past, natural tidal marshes in the south bay were segmented by levees and converted into ponds for use in salt production. In an effort to provide habitat for migratory birds and other native plants and animals, as well as to rebuild natural capital, the South Bay Salt Pond Restoration Project (SBSPRP) is focused on restoring a portion of the over 15,000 acres of wetlands in California's South San Francisco Bay. The process of restoration begins when a levee is breached; the bay water and sediment flow into the ponds and eventually restore natural tidal marshes. Since the spring of 2010 the NASA Ames Research Center (ARC) DEVELOP student internship program has collaborated with the South Bay Salt Pond Restoration Project (SBSPRP) to study the effects of these restoration efforts and to provide valuable information to assist in habitat management and ecological forecasting. All of the studies were based on remote sensing techniques -- NASA's area of expertise in the field of Earth Science, and used various analytical techniques such as predictive modeling, flora and fauna classification, and spectral detection, to name a few. Each study was conducted by a team of aspiring scientists as a part of the DEVELOP program at Ames.

Newcomer, Michelle E.↗