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Vanderbilt, Vern

Publications and source records attributed to Vanderbilt, Vern.

Estimating the Relative Water Content of Leaves in a Cotton Canopy

Remotely sensing plant canopy water status remains a long-term goal of remote sensing research. Established approaches to estimating canopy water status the Crop Water Stress Index, the Water Deficit Index and the Equivalent Water Thickness involve measurements in the thermal or reflective infrared. Here we report plant water status estimates based upon analysis of polarized visible imagery of a cotton canopy measured by ground Multi-Spectral Polarization Imager (MSPI). Such estimators potentially provide access to the plant hydrological photochemistry that manifests scattering and absorption effects in the visible spectral region.Twice during one day, +- 3 hours from solar noon, we collected polarized imagery and relative water content data on a cotton test plot located at the Arid Land Agricultural Research Center, United States Department of Agriculture, Maricopa, AZ. The test plot, a small portion of a large cotton field, contained stressed plants ready for irrigation. The evening prior to data collection we irrigated several rows of plants within the test plot. Thus, ground MSPI imagery from both morning and afternoon included cotton plants with a range of water statuses. Data analysis includes classifying the polarized imagery into sunlit reflecting, sunlit transmitting, shaded foliage and bare soil. We estimate the leaf surface reflection and interior reflection based upon the per pixel polarization and sunview directions. We compare our cotton results with our prior polarization results for corn and soybean leaves measured in the lab and corn leaves measured in the field.

Cotton Canopy↗

Estimating Leaf Water Status from Vis-Nir Reflectance and Transmittance

Remotely sensing the water status of plant canopies remains a long term goal of remote sensing research. Established approaches involve measurements in the thermal infrared and the 900-2000nm reflective infrared. Less popular UV-visible-NIR techniques presumably deserve research attention, because photochemical changes linked to plant water status manifest spectral light scattering and absorption changes. Here we monitored the visible and NIR light reflected from the leaf interior as well as the leaf transmittance as the relative water content of corn (Zeamays L.) leaves decreased. Our results highlight the importance of both scattering effects and effects due to absorption by leaf pigments.

VIS-NIR Reflectance↗

Estimating the Relative Water Content of Single Leaves from Optical Polarization Measurements

Remotely sensing the water status of plants and the water content of canopies remain long-term goals of remote sensing research. For monitoring canopy water status, existing approaches such as the Crop Water Stress Index and the Equivalent Water Thickness have limitations. The CWSI does not work well in humid regions, requires estimates of the vapor pressure deficit near the canopy during the remote sensing over-flight and, once stomata close, provides little information regarding the canopy water status. The EWI is based upon the physics of water-light interaction, not plant physiology. In this research, we applied optical polarization techniques to monitor the VISNIR light reflected from the leaf interior, R, as well as the leaf transmittance, T, as the relative water content (RWC) of corn (Zea mays) leaves decreased. Our results show that R and T both changed nonlinearly as each leaf dried, R increasing and T decreasing. Our results tie changes in the VISNIR R and T to leaf physiological changes linking the light scattered out of the drying leaf interior to its relative water content and to changes in leaf cellular structure and pigments. Our results suggest remotely sensing the physiological water status of a single leaf and perhaps of a plant canopy might be possible in the future. However, using our approach to estimate the water status of a leaf does not appear possible at present, because our results display too much variability that we do not yet understand.

Leaf Reflectance↗

Potential Sources of Polarized Light from a Plant Canopy

Field measurements have demonstrated that sunlight polarized during a first surface reflection by shiny leaves dominates the optical polarization of the light reflected by shiny-leafed plant canopies having approximately spherical leaf angle probability density functions ("Leaf Angle Distributions" - LAD). Yet for other canopies - specifically those without shiny leaves and/or spherical LADs - potential sources of optically polarized light may not always be obvious. Here we identify possible sources of polarized light within those other canopies and speculate on the ecologically important information polarization measurements of those sources might contain.

Polarized Light↗

Leaf Relative Water Content Estimated from Leaf Reflectance and Transmittance

Remotely sensing the water status of plants and the water content of canopies remain long term goals of remote sensing research. In the research we report here, we used optical polarization techniques to monitor the light reflected from the leaf interior, R, as well as the leaf transmittance, T, as the relative water content (RWC) of corn (Zea mays) leaves decreased. Our results show that R and T both change nonlinearly. The result show that the nonlinearities cancel in the ratio R/T, which appears linearly related to RWC for RWC less than 90%. The results suggest that potentially leaf water status and perhaps even canopy water status could be monitored starting from leaf and canopy optical measurements.

Corn↗

Remotely Sensing the Photochemical Reflectance Index (PRI)

In remote sensing, the Photochemical Reflectance Index (PRI) provides insight into physiological processes occurring inside the leaves in a stand of plants. Developed by Gamon et al., (1990 and 1992), PRI evolved from laboratory measurements of the reflectance of individual leaves (Bilger et al.,1989). Yet in a remotely sensed image, a pixel measurement may include light from both reflecting and transmitting leaves. We conducted laboratory experiments comparing values of PRI based upon polarized reflectance and transmittance measurements of water and nutrient stressed leaves. We illuminated single detached leaves using a current controlled light source (Oriel model 66881) and measured the leaf weight using an analytical balance (Mettler model AE 260) and the light reflected and transmitted by the leaf during dry down using two Analytical Spectral Devices spectroradiometers. Polarizers on the incident and reflected light beams allowed us to divide the leaf reflectance into two parts: a polarized surface reflectance and a non-polarized 'leaf interior' reflectance. Our results underscore the importance when calculating PRI of removing the leaf surface reflection, which contains no information about physiological processes ongoing in the leaf interior. The results show that the leaf physiology information is in the leaf interior reflectance, not the leaf transmittance. Applied to a plant stand, these results suggest use of polarization measurements in sun-view directions that minimize the number of sunlit transmitting leaves in the sensor field of view.

Leaves↗

Relative Water Content, Bidirectional Reflectance and Bidirectional Transmittance of the Interior of Detached Leaves During Dry Down.

Remotely sensing the water status of plants and the water content of canopies remain long-term goals of remote sensing research [1]. Estimates of canopy water content commonly involve measurements in the 900nm to 2000nm portion of the optical spectrum [1]. We have used optical polarization techniques to remove leaf surface reflection and to demonstrate that the visible light reflected by the interior of green healthy corn leaves measured in situ inversely depends upon the leaf relative water content (RWC) [2]. In the research reported here, we again used optical polarization techniques in order to remove the leaf surface reflection from our measurements. This allowed us to monitor the interiors of detached corn leaf samples during leaf dry down measuring for each sample the RWC, bidirectional spectral reflectance and bidirectional spectral transmittance over the wavelength range 450nm to 2,500nm. Our new results like our earlier results show light scattered by the leaf interior measured in the visible wavelength region generally increased as leaf RWC decreased. However, the spectral character and the much improved signal noise of our new results shows the RWC-linked visible light scattering changes are due to leaf structural changes. Our new results show that scattering changes that occur with changing leaf RWC are not attributable to molecular configuration changes in cellular pigments.

Corn↗

Is There Ecological Information in Optical Polarization Data?

Optical linear polarization? In remote sensing it's due to specular reflection. The first surface that incident light encounters - a smooth water surface or the waxy first surface of a leaf's cuticle, if it's even somewhat smooth (i.e. shiny) - will specularly reflect and linearly polarize the incident light. We provide three examples of the types of ecological information contained in remotely sensed optical linear polarization measurements. Remove the surface reflection to better see the interior. The linearly polarized light reflected by leaf surfaces contains no information about cellular pigments, metabolites, or water contained in the leaf interiors of a plant canopy, because it never enters the leaf interior to interact with them. Thus, for purposes of remotely sensing the leaf interiors of a plant canopy, the linearly polarized light should be subtracted from the total reflected light, because including it would add noise to the measurement. In particular 'minus specular' vegetation indices should allow improved monitoring of a plant canopy's physiological processes. Estimate plant development stage and yield. Wheat and sorghum grain heads, following emergence, rapidly extend upward and very quickly tower over nearby leaves, partially blocking our view of the sunlight reflected by those leaf surfaces. The resulting decrease in the amount of surface reflected and polarized sunlight, if monitored over time, potentially allows per-field estimates of the dates of the heading and flowering development stages to be interleaved with weather data in models, which is key to better estimating per-field grain yield. Similar polarization changes may occur in other grasses, such as oats, barley, corn and rice, each a crop so widely grown that it potentially affects climate at the regional scale. Wetlands Mapping. The sunlight specularly reflected by surface waters is blindingly bright, spectrally flat and polarized - all of which telegraphs that the ground area is inundated. Inundated soils exchange methane with the atmosphere; non-inundated soils, carbon dioxide. Aquatic plants growing through the water surface pipe the soil-produced methane via the stomata to the atmosphere, enhancing exchanges rates by factors of 10-20 compared to ebullition (bubbling) or diffusion through the water column to the atmosphere. Thus, mapping wetland areas into three community types - inundated areas with emergent vegetation, open water and uplands - provides potentially key information to water, carbon and energy budgets at landscape to global scales.

Water↗

Optical Polarization of Light from a Sorghum Canopy Measured Under Both a Clear and an Overcast Sky

Introduction: We tested the hypothesis that the optical polarization of the light reflected by a sorghum canopy is due to a Fresnel-type redirection, by sorghum leaf surfaces, of light from an unpolarized light source, the sun or overcast sky, toward the measuring sensor. If it can be shown that the source of the polarization of the light scattered by the sorghum canopy is a first surface, Fresnel-type reflection, then removing this surface reflected light from measurements of canopy reflectance presumably would allow better insight into the biochemical processes such as photosynthesis and metabolism that occur in the interiors of sorghum canopy leaves. Methods: We constructed a tower 5.9m tall in the center of a homogenous sorghum field. We equipped two Barnes MMR radiometers with polarization analyzers on the number 1, 3 and 7 Landsat TM wavelength bands. Positioning the radiometers atop the tower, we collected radiance data in 44 view directions on two days, one day with an overcast sky and the other, clear and sunlit. From the radiance data we calculated the linear polarization of the reflected light for each radiometer wavelength channel and view direction. Results and Discussion: Our experimental results support our hypothesis, showing that the amplitude of the linearly polarized portion of the light reflected by the sorghum canopy varied dramatically with view azimuth direction under a point source, the sun, but the amplitude varied little with view azimuth direction under the hemispherical source, the overcast sky. Under the clear sky, the angle of polarization depended upon the angle of incidence of the sunlight on the leaf, while under the overcast sky the angle of polarization depended upon the zenith view angle. These results support a polarized radiation transport model of the canopy that is based upon a first surface, Fresnel reflection from leaves in the sorghum canopy.

cloud cover↗

Flowering Development Stage in Sorghum Estimated from Optical Polarization Data

We tested the hypothesis that we can estimate the flowering developmentstage of sorghum from measurements of the polarization of the light scattered by asorghum canopy. Such information is critically important in agricultural productionforecasting. If such information were available for each sorghum field in a region, itcould be interleaved with timely weather data and used in crop production models toobtain improved estimates of sorghum grain production for the region.

Weather Data↗

Hyperspectral Remote Sensing of Foliar Nitrogen Content

A strong positive correlation between vegetation canopy bidirectional reflectance factor (BRF) in the near infrared (NIR) spectral region and foliar mass-based nitrogen concentration (%N) has been reported in some temperate and boreal forests. This relationship, if true, would indicate an additional role for nitrogen in the climate system via its influence on surface albedo and may offer a simple approach for monitoring foliar nitrogen using satellite data. We report, however, that the previously reported correlation is an artifact - it is a consequence of variations in canopy structure, rather than of %N. The data underlying this relationship were collected at sites with varying proportions of foliar nitrogen-poor needleleaf and nitrogen-rich broadleaf species, whose canopy structure differs considerably. When the BRF data are corrected for canopy-structure effects, the residual reflectance variations are negatively related to %N at all wavelengths in the interval 423-855 nm. This suggests that the observed positive correlation between BRF and %N conveys no information about %N. We find that to infer leaf biochemical constituents, e.g., N content, from remotely sensed data, BRF spectra in the interval 710-790 nm provide critical information for correction of structural influences. Our analysis also suggests that surface characteristics of leaves impact remote sensing of its internal constituents. This further decreases the ability to remotely sense canopy foliar nitrogen. Finally, the analysis presented here is generic to the problem of remote sensing of leaf-tissue constituents and is therefore not a specific critique of articles espousing remote sensing of foliar %N.

Knyazikhin, Yuri↗

Decoupling Contributions from Canopy Structure and Leaf Optics is Critical for Remote Sensing Leaf Biochemistry (Reply to Townsend, et al.)

Townsend et al. (1) agree that we explained that the apparent relationship (2) between foliar nitrogen (%N) and near-infrared (NIR) canopy reflectance was largely attributable to structure (which is in turn caused by variation in fraction of broadleaf canopy). Our conclusion that the observed correlation with %N was spurious (i.e., lacking a causal basis) is, thus, clearly justified: we demonstrated that structure explained the great majority of observed correlation, where the structural influence was derived precisely via reconciling the observed correlation with radiative-transfer theory. What this also suggests is that such correlations, although observed, do not uniquely provide information on canopy biochemical constituents.

Knyazikhin, Yuri↗