Data for EMSL Project 50414 from September 2024
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Engineering topics
Publications and source records attributed to Ward, Andrew.
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The generation of broadly neutralizing antibodies (bnAbs) to conserved epitopes on HIV Envelope (Env) is one of the cornerstones of HIV vaccine research. The animal models commonly used for HIV do not reliably produce a potent broadly neutralizing serum antibody response, with the exception of cows. Cows have previously produced a CD4 binding site response by homologous prime and boosting with a native-like Env trimer. In small animal models, other engineered immunogens were shown to focus antibody responses to the bnAb V2-apex region of Env. Here, we immunized two groups of cows (n = 4) with two regimens of V2-apex focusing Env immunogens to investigate whether antibody responses could be generated to the V2-apex on Env. Group 1 was immunized with chimpanzee simian immunodeficiency virus (SIV)-Env trimer that shares its V2-apex with HIV, followed by immunization with C108, a V2-apex focusing immunogen, and finally boosted with a cross-clade native-like trimer cocktail. Group 2 was immunized with HIV C108 Env trimer followed by the same HIV trimer cocktail as Group 1. Longitudinal serum analysis showed that one cow in each group developed serum neutralizing antibody responses to the V2-apex. Eight and 11 bnAbs were isolated from Group 1 and Group 2 cows, respectively, and showed moderate breadth and potency. Potent and broad responses in this study developed much later than previous cow immunizations that elicited CD4bs bnAbs responses and required several different immunogens. All isolated bnAbs were derived from the ultralong CDRH3 repertoire. The finding that cow antibodies can target more than one broadly neutralizing epitope on the HIV surface reveals the generality of elongated structures for the recognition of highly glycosylated proteins. The exclusive isolation of ultralong CDRH3 bnAbs, despite only comprising a small percent of the cow repertoire, suggests these antibodies outcompete the long and short CDRH3 antibodies during the bnAb response.
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The SCALE/Polaris–PARCS code procedure has been used in the confirmatory analysis for boiling water reactors by the US Nuclear Regulatory Commission. In this study, the SCALE/Polaris v6.3.0–PARCS v3.4.2 code procedure with the Evaluated Nuclear Data File (ENDF)/B-VII.1 AMPX 56-group library was validated by comparing the simulated results with the measured data for operating boiling water reactors, including Peach Bottom Unit 2 cycles 1–3, Hatch Unit 1 cycles 1–3, and Quad Cities Unit 1 cycles 1–3. The uncertainties and biases of the SCALE/Polaris–PARCS code package for boiling water reactor physics analysis were evaluated in the validation for key nuclear parameters such as reactivity and traversing in-core probe data.
This study was conducted to validate the SCALE/Polaris v6.3.0–PARCS v3.4.2 code procedure with the Evaluated Nuclear Data File (ENDF)/B-VII.1 AMPX 56-group library for pressurized water reactor (PWR) analysis, by comparing simulated results with measured data for critical experiments and operating PWRs. Uncertainties of the SCALE/Polaris–PARCS code procedure for PWR analysis were evaluated in the validation for the PWR key nuclear parameters such as critical boron concentrations, reactivity, control bank work, temperature coefficients, and pin and assembly power peaking factors.
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