Robust nonequilibrium pathways to microcompartment assembly

Abstract

Significance The structure of the carboxysome resembles a viral capsid, but, unlike many viruses, the monomers of its shell do not appear to fit together in a uniquely preferred way. As a result, the size and shape of this bacterial microcompartment must be determined by the dynamics of its self-assembly process. Using theory and simulation of a model system, we show that the mechanism of assembling such a structure can proceed through nonequilibrium dynamics that are both reliable and controllable. We identify experimentally tunable parameters that modulate the shape and size of the assembled structure, advancing strategies to repurpose natural microcompartments and to create synthetic mimics.