DOE OSTI · 2203457
KBase Narrative - Supplemental Data for "Mixed waste contamination selects for a mobile genetic element population enriched in multiple heavy metal resistance genes"
Abstract
Here we provide the complete set of circular elements produced by SCAPP from metagenomic data that may represent mobile genetic elements (MGEs). For the publication, these sequences were de-replicated within the high [U] and low [U] sample sets. Additionally, 98 of the circular elements were removed for downstream analysis due to high suspicion of being (1) chloroplast or mitochondrial sequences or (2) erroneously circularized long repeat regions. The complete list of circular elements used for the analysis along with metadata can be found in Tables S5 and S6.
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Goff, Jennifer, Lui, Lauren, Nielsen, Torben, Poole, Farris, Smith, Heidi, Walker, Kathleen, Hazen, Terry, Fields, Matthew, Arkin, Adam, Adams, Michael. 2023-10-25. KBase Narrative - Supplemental Data for "Mixed waste contamination selects for a mobile genetic element population enriched in multiple heavy metal resistance genes". https://doi.org/10.25982/160429.7%2F2203457
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