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DOE OSTI · 2473114

Auto-MuRCiS: a streamlined software package for analysis of multiplex, randomized CRISPR interference sequencing data

Myers, Kevin S.·Place, Michael·Gasch, Audrey P.·Noguera, Daniel R.·Donohue, Timothy J.
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Abstract

Multiplex, randomized CRISPR interference sequencing (MuRCiS) allows for the simultaneous identification of multiple gene knockouts that together influence microbial processes. Here, we report on an updated analysis tool called Auto-MuRCiS that utilizes Docker to make the analysis of these data rapid and more user-friendly.

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59 BASIC BIOLOGICAL SCIENCES97 MATHEMATICS AND COMPUTINGCRISPRicomputationdockerpipelinepython

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Myers, Kevin S., Place, Michael, Gasch, Audrey P., Noguera, Daniel R., Donohue, Timothy J.. 2024-07-31. Auto-MuRCiS: a streamlined software package for analysis of multiplex, randomized CRISPR interference sequencing data. https://doi.org/10.1128/mra.00356-24

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