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DOE OSTI · 2506755

Side-Chain and Ring-Size Effects on Permeability in Artificial Water Channels

Abstract

Artificial water channels (AWCs) have emerged as a promising framework for stable water permeation, with water transport rates comparable to aquaporins (3.4–40.3 × 10 8 H 2 O/channel/s). In this study, we probe the influence of ring-size and side-chain length on the water permeability observed within a class of AWCs termed ligand-appended pillar[n]arenes (LAPs) that have an adjustable ring-size (m) and side-chain length (n). Through all-atom molecular dynamics simulations, we calculate the permeability of these channels using the collective diffusion model and find their permeabilities. We characterize the mechanistic influence of pillar[n]arene ring-size and side-chain length on the channel water permeability by analyzing the characteristics of the internal permeating water-wire and the surrounding channel structure. We observe that water permeability decreases as a function of increasing ring-size due to increases in hydrophilic contacts between the permeating water-wire and the oxygen groups on the channel wall. Further, we observe an increase in water permeability as a function of side-chain length due to increased partitioning of the channel terminal groups into the hydrophilic blocks of the surrounding bilayer. For the LAP6 channel, with increase in side-chain length, the distance between terminal groups increases and leads to an increase in pore size, thereby enhancing water permeability. In the case of LAP5, as side-chain length increases, the channel displays a compensatory effect between tilt and bend angle due to the flexible side-chains. Such flexibility leads to higher terminal group partitioning in the hydrophilic blocks of the bilayer and extends the permeating water-wire. Furthermore, this increase in water-wire length and hydrophilic block access overcomes the nonmonotonic pore size trend in pillar[5]arene channels.

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BibTeXRIS

Duncan, Tyler J. [University of Texas at Austin, TX (United States); University of Texas at Austin], Behera, Harekrushna [University of Texas at Austin, TX (United States)] (ORCID:0000000285975186), Meng, Michael F. [University of Texas at Austin, TX (United States)], Zhang, Zidan [University of Texas at Austin, TX (United States)] (ORCID:0000000269098742), Marioni, Nico [University of Texas at Austin, TX (United States)] (ORCID:0009000123073064), Tadesse, Meron [University of Texas at Austin, TX (United States)], Kumar, Manish [University of Texas at Austin, TX (United States)] (ORCID:0000000155453793), Ganesan, Venkat [University of Texas at Austin, TX (United States)] (ORCID:0000000338995843). 2025-01-02. Side-Chain and Ring-Size Effects on Permeability in Artificial Water Channels. https://doi.org/10.1021/acs.jpcb.4c05244

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36 MATERIALS SCIENCE↗