DOE OSTI · code-149391
pnnl-predictive-phenomics/csc040-gem
Abstract
Genome-Scale Metabolic Model Continuous Validation with Memote for CarbStor Community Member Rhodococcus These repositories contain the continuous validation environment for an organism-specific genome-scale metabolic model (GEM) using Memote. Memote is a software tool that provides a suite of tests to ensure the quality and consistency of metabolic models. By integrating Memote into a continuous integration (CI) workflow, we can automatically validate updates to the GEM, ensuring that model modifications improve or maintain the model's integrity.
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McNaughton, Andrew [@PNNL], Zucker, Jeremy [Pacific Northwest National Laboratory], Pino, James, Torres, Victor E., George, August [Pacific Northwest National Laboratory (PNNL), Richland, WA (United States)], Mahserejian, Shant [Pacific Northwest National Laboratory (PNNL), Richland, WA (United States)], Petyuk, Vladislav [Pacific Northwest National Laboratory (PNNL), Richland, WA (United States)], Anthony, Winston [Pacific Northwest National Laboratory (PNNL), Richland, WA (United States)], McClure, Ryan [Pacific Northwest National Laboratory (PNNL), Richland, WA (United States)]. 2024-12-23. pnnl-predictive-phenomics/csc040-gem. https://doi.org/10.11578/dc.20241223.4
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