Search NASA⌕ Search

SEARCH · Search NASA

Results for “Association study”

Search indexed NASA NTRS and DOE OSTI research on propulsion, heat transfer, battery materials and energy systems. Follow report and document links to the original sources.

Quote a phrase for an exact phrase match. Source license links do not imply unrestricted reuse.

At least 181 records · Page 10
All sourcesNASA NTRSDOE OSTI
DOE OSTI2022

The Latent Dirichlet Allocation model applied to airborne LiDAR data: A case study on mapping forest degradation associated with fragmentation and fire in the Amazon region

1. LiDAR data are being increasingly used to provide a detailed characterization of the vertical profile of forests. This characterization enables the generation of new insights on the influence of environmental drivers and anthropogenic disturbances on forest structure as well as on how forest structure influences important ecosystem functions and services. Unfortunately, extracting information from LiDAR data in a way that enables the spatial visualization of forest structure, as well as its temporal changes, is challenging due to the high dimensionality of these data. 2. In this study, we show how the Latent Dirichlet Allocation model applied to LiDAR data (LidarLDA) can be used to identify forest structural types and how the relative abundance of these forest types changes throughout the landscape. The code to fit this model is made available through the open-source r package LidarLDA in github. We illustrate the use of LidarLDA both with simulated data and data from a large-scale fire experiment in the Brazilian Amazon region. 3. Using simulated data, we demonstrate that LidarLDA accurately identifies the number of forest types as well as their spatial distribution and absorptance probabilities. For the empirical data, we found that LidarLDA detects both landscape-level patterns in forest structure as well as the strong interacting effect of fire and forest fragmentation on forest structure based on the experimental fire plots. More specifically, LidarLDA reveals that proximity to forest edge exacerbates the impact of fires, and that burned forests remain structurally different from unburned areas for at least 7 years, even when burned only once. Importantly, LidarLDA generates insights on the 3D structure of forest that cannot be obtained using more standard approaches that just focus on top-of-the-canopy information (e.g. canopy height models based on LiDAR data). 4. By enabling the mapping of forest structure and its temporal changes, we believe that LidarLDA will be of broad utility to the ecological research community.

54 ENVIRONMENTAL SCIENCES↗
DOE OSTI2024

A research program to measure the lifetime of spin polarized fuel

The use of spin polarized fuel could increase the deuterium-tritium (D-T) fusion cross section by a factor of 1.5 and, owing to alpha heating, increase the fusion power by an even larger factor. Issues associated with the use of polarized fuel in a reactor are identified. Theoretically, nuclei remain polarized in a hot fusion plasma. The similarity between the Lorentz force law and the Bloch equations suggests polarization can be preserved despite the rich electromagnetic spectrum present in a magnetic fusion device. The most important depolarization mechanisms can be tested in existing devices. The use of polarized deuterium and 3 He in an experiment avoids the complexities of handling tritium, while encompassing the same nuclear reaction spin-physics, making it a useful proxy to study issues associated with full D-T implementation. 3 He fuel with 65% polarization can be prepared by permeating optically-pumped 3 He into a shell pellet. Dynamically polarized 7 Li-D pellets can achieve 70% vector polarization for the deuterium. Cryogenically-frozen pellets can be injected into fusion facilities by special injectors that minimize depolarizing field gradients. Alternatively, polarized nuclei could be injected as a neutral beam. Once injected, the lifetime of the polarized fuel is monitored through measurements of escaping charged fusion products. Multiple experimental scenarios to measure the polarization lifetime in the DIII-D tokamak and other magnetic-confinement facilities are discussed, followed by outstanding issues that warrant further study.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗
DOE OSTI2024

Intrinsic Bonding and Reactivity of Actinide Clusters Poster

The effect of electronic structure on chemical bonding and reactivity is one of the most important questions in the field of chemistry. Insight into chemical bond formation involving elements that contain f electrons (i.e., the lanthanides and actinides) is critical for solving specific technical challenges, such as development of advanced nuclear fuel cycles and efficient rare earth separations, as well as a broader understanding of bonding across the entire periodic table. The primary technique for studying the fundamentals of lanthanide and actinide bonding is crystallization of metal-ligand compounds followed by structural determination with X-rays and comparison to theory with computational chemistry. While this procedure has yielded significant insights for a wide variety of elements, it is challenging to apply to the heavier trans-uranic actinides such as berkelium and californium because of limited material availability, significant radioactivity, and poorly understood chemical reactivity of these elements. We hypothesize that by forming actinide-ligand clusters in a mass spectrometer and probing their reactivity in the gas-phase, many of the challenges associated with studying the heavier trans-uranic elements can be circumvented. This project will develop a capability to address a wide range of actinide bonding and reactivity phenomena, increasing Idaho National Laboratory’s capability to address fundamental questions at the forefront of heavy element chemical and molecular science.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗
DOE OSTI2023

Genetics of varicose veins reveals polygenic architecture and genetic overlap with arterial and venous disease

Varicose veins represent a common cause of cardiovascular morbidity, with limited available medical therapies. Although varicose veins are heritable and epidemiologic studies have identified several candidate varicose vein risk factors, the molecular and genetic basis remains uncertain. Here we analyzed the contribution of common genetic variants to varicose veins using data from the Veterans Affairs Million Veteran Program and four other large biobanks. Among 49,765 individuals with varicose veins and 1,334,301 disease-free controls, we identified 139 risk loci. We identified genetic overlap between varicose veins, other vascular diseases and dozens of anthropometric factors. Using Mendelian randomization, we prioritized therapeutic targets via integration of proteomic and transcriptomic data. Finally, topological enrichment analyses confirmed the biologic roles of endothelial shear flow disruption, inflammation, vascular remodeling and angiogenesis. Further, these findings may facilitate future efforts to develop nonsurgical therapies for varicose veins.

59 BASIC BIOLOGICAL SCIENCES↗
DOE OSTI2023

Entanglement and topology in RG flows across dimensions: caps, bridges and corners

We quantitatively address the following question: for a QFT which is partially compactified, so as to realize an RG flow from a D-dimensional CFT in the UV to a d-dimensional CFT in the IR, how does the entanglement entropy of a small spherical region probing the UV physics evolve as the size of the region grows to increasingly probe IR physics? This entails a generalization of spherical regions to setups without full Lorentz symmetry, and we study the associated entanglement entropies holographically. We find a tight interplay between the topology and geometry of the compact space and the evolution of the entanglement entropy, with universal transitions from ‘cap’ through ‘bridge’ and ‘corner’ phases, whose features reflect the details of the compact space. As concrete examples we discuss twisted compactifications of 4d $\mathcal{N}$ = 4 SYM on T 2 , S 2 and hyperbolic Riemann surfaces.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗
DOE OSTI2021

Real-time gravitational replicas: formalism and a variational principle

This work is the first step in a two-part investigation of real-time replica wormholes. Here we study the associated real-time gravitational path integral and construct the variational principle that will define its saddle-points. We also describe the general structure of the resulting real-time replica wormhole saddles, setting the stage for construction of explicit examples. These saddles necessarily involve complex metrics, and thus are accessed by deforming the original real contour of integration. However, the construction of these saddles need not rely on analytic continuation, and our formulation can be used even in the presence of non-analytic boundary-sources. Furthermore, at least for replica- and CPT-symmetric saddles we show that the metrics may be taken to be real in regions spacelike separated from a so-called ‘splitting surface’. This feature is an important hallmark of unitarity in a field theory dual.

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗
DOE OSTI2020

The Higgs and leptophobic force at the LHC

The Higgs boson could provide the key to discover new physics at the Large Hadron Collider. We investigate novel decays of the Standard Model (SM) Higgs boson into leptophobic gauge bosons which can be light in agreement with all experimental constraints. We study the associated production of the SM Higgs and the leptophobic gauge boson that could be crucial to test the existence of a leptophobic force. Our results demonstrate that it is possible to have a simple gauge extension of the SM at the low scale, without assuming very small couplings and in agreement with all the experimental bounds that can be probed at the LHC.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗
DOE OSTI2024

CMPLE: Correlation Modeling to Decode Photosynthesis Using the Minorize–Maximize Algorithm

In plant genomic experiments, correlations among various biological traits (phenotypes) give new insights into how genetic diversity may have tuned biological processes to enhance fitness under diverse conditions. Consequently, knowing how the correlations are affected by genetic (G) and environmental (E) factors helps develop climate-resilient plants. However, the current literature lacks any method for assessing the effect of predictors on pairwise correlations among multiple phenotypes together with easily interpretable model parameters. To address this need, we propose to model pairwise correlations directly in terms of G and E and develop a computationally efficient inference procedure. Two major novelties in our methodology are (1) the use of a composite pairwise likelihood method to avoid the positive definiteness restriction on the correlation matrix and (2) the use of a novel Minorize–Maximize (MM) algorithm for the efficient estimation of a large number of parameters. The proposed method shows excellent numerical performance on synthetic datasets. Here, the analysis of the motivating data on cowpea reveals that the rates of solar energy storage by photosynthesis (the aggregate trait) are differentially affected by different genetic loci through two distinct processes: “photoinhibition” which results from photodamage caused by excess light, and “photoprotection” which protects plants from photodamage but also results in energy loss.

Correlation modeling↗
DOE OSTI2022

Distribution of Mn Oxidation States in Grassland Soils and Their Relationships with Soil Pores

Manganese (Mn) is known to be an active contributor to processing and cycling of soil organic carbon (C), yet the exact mechanisms behind its interactions with C are poorly understood. Plant diversity in terrestrial ecosystems drives feedback links between plant C inputs and soil pores, where the latter, in turn, impact the redox environment and Mn. This study examined associations between soil pores (>36 μm Ø) and Mn within intact soils from two grassland ecosystems, after their >6-year implementation in a replicated field experiment. In this work, we used μ-XRF imaging and XANES spectroscopy to explore spatial distribution patterns of Mn oxidation states, combined with X-ray computed microtomography and 2D zymography. A high plant diversity system (restored prairie) increased soil C and modified spatial distribution patterns of soil pores as compared to a single species system (monoculture switchgrass). In switchgrass, the abundance of oxidized and reduced Mn oxidation states varied with distance from pores consistently with anticipated O 2 diffusion, while in the soil from restored prairie, the spatial patterns suggested that biological activity played a greater role in influencing Mn distributions. Based on the findings, we propose a hypothesis that Mn transformations promote C gains in soils of high plant diversity grasslands.

54 ENVIRONMENTAL SCIENCES↗
DOE OSTI2023

Genomics discovery of giant fungal viruses from subsurface oceanic crustal fluids

Abstract The oceanic igneous crust is a vast reservoir for microbial life, dominated by diverse and active bacteria, archaea, and fungi. Archaeal and bacterial viruses were previously detected in oceanic crustal fluids at the Juan de Fuca Ridge (JdFR). Here we report the discovery of two eukaryotic Nucleocytoviricota genomes from the same crustal fluids by sorting and sequencing single virions. Both genomes have a tRNATyr gene with an intron (20 bps) at the canonical position between nucleotide 37 and 38, a common feature in eukaryotic and archaeal tRNA genes with short introns (<100 bps), and fungal genes acquired through horizontal gene transfer (HGT) events. The dominance of Ascomycota fungi as the main eukaryotes in crustal fluids and the evidence for HGT point to these fungi as the putative hosts, making these the first putative fungi-Nucleocytoviricota specific association. Our study suggests active host-viral dynamics for the only eukaryotic group found in the subsurface oceanic crust and raises important questions about the impact of viral infection on the productivity and biogeochemical cycling in this ecosystem.

Bhattacharjee, Ananda S.↗
DOE OSTI2024

Harmonic generation in a terawatt x-ray free-electron laser

Abstract Terawatt x-ray free-electron lasers (XFELs) represent the frontier in further development of x-ray sources and require high current densities with strong transverse focusing. In this paper, we investigate the implications/potentialities of TW XFELs on the generation of harmonics at still shorter wavelengths and higher photon energies. The simulations indicate that significant power levels are possible at high harmonics of the XFEL resonance and that these XFELs can be an important coherent source of hard x-rays through the gamma ray spectrum. For this purpose, we use the MINERVA simulation code which self-consistently includes harmonic generation. Both helical and planar undulators are discussed in which the fundamental is at 1.5 Å and study the associated harmonic generation. While tapered undulators are needed to reach TW powers at the fundamental, the taper does not enhance the harmonics because the taper must start before saturation of the fundamental, while the harmonics saturate before this point is reached. Nevertheless, the harmonics reach substantial powers. Simulations indicate that, for the parameters under consideration, peak powers of the order of 180 MW are possible at the fifth harmonic with a photon energy of about 41 keV and still high harmonics may also be generated at substantial powers. Such high harmonic powers are certain to enable a host of enhanced applications.

Physics↗
DOE OSTI2022

Simulation study of fast ion losses associated with the rotating n = 1 resonant magnetic perturbations in KSTAR

In this work we describe a simulation framework for testing the fast ion loss mechanism associated with the experimentally observed beam ion losses when an externally applied toroidally rotating perturbed magnetic field is used to control edge localized modes in the KSTAR tokamak. The simulations reproduce the key qualitative features of neutral beam injection (NBI) ion detection by a fast ion loss detector. The NBI ion losses in the simulation mainly occur for passing particles due to orbit stochastization, which is caused by orbit resonance with the 3D field perturbations. The relative toroidal angle of NBI ion deposition to the orbit island determines the radial path of the particles between confinement or loss. The fast ion loss quantity depends on the toroidal angle rotation of the 3D field with respect to the beam deposition position. The averaged transport of toroidal canonical angular momentum reveals that linear and nonlinear resonance of the NBI ions within the 3D field are the main factors determining fast ion transport and loss.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗
DOE OSTI2020

Commissioning plan for LCLS II 2 K cold box

Commissioning of the LCLS II cryogenic plant has been planned with respect to electrical and mechanical systems checkout, equipment cleanup, cool-down, and individual performance evaluation. This plant consists of warm and cold storage, helium compressors, 4.5 K and 2 K cold boxes, and all auxiliaries typical for helium refrigeration processes. The 2 K cold box, consisting of five cold compressors in series to produce the flow and pressures necessary for 2K operation, will be the last equipment installed and, along with an additional 10,000 L helium dewar, will allow the entire plant to be commissioned as a single entity. The pre-commissioning stages, commissioning plan for 2 K cold box without connecting to the LCLS II LINAC, additional test equipment needed to simulate the loads, all process studies and associated results are described herein.

36 MATERIALS SCIENCE↗
DOE OSTI2022

Stellar population analysis of MaNGA early-type galaxies: IMF dependence and systematic effects

We study systematics associated with estimating simple stellar population (SSP) parameters – age, metallicity [M/H], α-enhancement [α/Fe], and initial mass function (IMF) shape – and associated M * /L gradients, of elliptical slow rotators (E-SRs), fast rotators (E-FRs), and S0s from stacked spectra of galaxies in the MaNGA survey. These systematics arise from (i) how one normalizes the spectra when stacking; (ii) having to subtract emission before estimating absorption line strengths; (iii) the decision to fit the whole spectrum or just a few absorption lines; (iv) SSP model differences (e.g. isochrones, enrichment, IMF). The MILES+Padova SSP models, fit to the H β , 〈Fe〉, TiO 2SDSS , and [MgFe] Lick indices in the stacks, indicate that out to the half-light radius R e : (a) ages are younger and [α/Fe] values are lower in the central regions but the opposite is true of [M/H]; (b) the IMF is more bottom-heavy in the center, but is close to Kroupa beyond about R e /2; (c) this makes M * /L about 2 × larger in the central regions than beyond R e /2. While the models of Conroy et al. return similar [M/H] and [α/Fe] profiles, the age and (hence) M * /L profiles can differ significantly even for solar abundances and a Kroupa IMF; different responses to non-solar abundances and IMF parametrization further compound these differences. There are clear (model independent) differences between E-SRs, E-FRs, and S0s: younger ages and less enhanced [α/Fe] values suggest that E-FRs and S0s are not SSPs, but relaxing this assumption is unlikely to change their inferred M * /L gradients significantly.

79 ASTRONOMY AND ASTROPHYSICS↗
DOE OSTI2020

Dirty bosons on the Cayley tree: Bose-Einstein condensation versus ergodicity breaking

Building on large-scale quantum Monte Carlo simulations, we investigate the zero-temperature phase diagram of hard-core bosons in a random potential on site-centered Cayley trees with branching number K=2. In order to follow how the Bose-Einstein condensate (BEC) is affected by the disorder, we focus on both the zero-momentum density, probing the quantum coherence, and the one-body density matrix (1BDM) whose largest eigenvalue monitors the off-diagonal long-range order. We further study its associated eigenstate which brings useful information about the real-space properties of this leading eigenmode. Upon increasing randomness, we find that the system undergoes a quantum phase transition at finite disorder strength between a long-range ordered BEC state, fully ergodic at large scale, and a new disordered Bose glass regime showing conventional localization for the coherence fraction while the 1BDM displays a nontrivial algebraic vanishing BEC density together with a nonergodic occupation in real space. These peculiar properties can be analytically captured by a simple phenomenological description on the Cayley tree which provides a physical picture of the Bose glass regime.

36 MATERIALS SCIENCE↗
DOE OSTI2022

Use of diamond sensors for a high-flux, high-rate X-ray pass-through diagnostic

X-ray free-electron lasers (XFELs) deliver pulses of coherent X-rays on the femtosecond time scale, with potentially high repetition rates. While XFELs provide high peak intensities, both the intensity and the centroid of the beam fluctuate strongly on a pulse-to-pulse basis, motivating high-rate beam diagnostics that operate over a large dynamic range. The fast drift velocity, low X-ray absorption and high radiation tolerance properties of chemical vapour deposition diamonds make these crystals a promising candidate material for developing a fast (multi-GHz) pass-through diagnostic for the next generation of XFELs. A new approach to the design of a diamond sensor signal path is presented, along with associated characterization studies performed in the XPP endstation of the LINAC Coherent Light Source (LCLS) at SLAC. Qualitative charge collection profiles (collected charge versus time) are presented and compared with those from a commercially available detector. Quantitative results on the charge collection efficiency and signal collection times are presented over a range of approximately four orders of magnitude in the generated electron–hole plasma density.

73 NUCLEAR PHYSICS AND RADIATION PHYSICS↗