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Diesel Passenger Vehicle Shares Influenced Covid-19 Changes in Urban Nitrogen Dioxide Pollution

Diesel-powered vehicles emit several times more nitrogen oxides than comparable gasoline-powered vehicles, leading to ambient nitrogen dioxide (NO2) pollution and adverse health impacts. The COVID-19 pandemic and ensuing changes in emissions provide a natural experiment to test whether NO2 reductions have been starker in regions of Europe with larger diesel passenger vehicle shares. Here we use a semi-empirical approach that combines in-situ NO2 observations from urban areas and an atmospheric composition model within a machine learning algorithm to estimate business-as-usual NO2 during the first wave of the COVID-19 pandemic in 2020. These estimates account for the moderating influences of meteorology, chemistry, and traffic. Comparing the observed NO2 concentrations against business-as-usual estimates indicates that diesel passenger vehicle shares played a major role in the magnitude of NO2 reductions. European cities with the five largest shares of diesel passenger vehicles experienced NO2 reductions ∼ 2.5 times larger than cities with the five smallest diesel shares. Extending our methods to a cohort of non-European cities reveals that NO2 reductions in these cities were generally smaller than reductions in European cities, which was expected given their small diesel shares. We identify potential factors such as the deterioration of engine controls associated with older diesel vehicles to explain spread in the relationship between cities’ shares of diesel vehicles and changes in NO2 during the pandemic. Our results provide a glimpse of potential NO2 reductions that could accompany future deliberate efforts to phase out or remove passenger vehicles from cities.

Nitrogen Dioxide↗

Quantifying urban, industrial, and background changes in NO2 during the COVID-19 lockdown period based on TROPOMI satellite observations

The COVID-19 lockdown had a large impact on anthropogenic emissions of air pollutants and particularly on nitrogen dioxide (NO 2 ). While the overall NO 2 decline over some large cities is well-established, understanding the details remains a challenge since multiple source categories contribute. In this study, a new method of isolation of three components (background NO 2 , NO 2 from urban sources, and NO 2 from industrial point sources) is applied to estimate the impact of the COVID-19 lockdown on each of them. The approach is based on fitting satellite data by a statistical model with empirical plume dispersion functions driven by a meteorological reanalysis. Population density and surface elevation data as well as coordinates of industrial sources were used in the analysis. The tropospheric NO 2 vertical column density (VCD) values measured by the Tropospheric Monitoring Instrument (TROPOMI) on board the Sentinel-5 Precursor over 261 urban areas for the period from 16 March to 15 June 2020 were compared with the average VCD values for the same period in 2018 and 2019. While the background NO 2 component remained almost unchanged, the urban NO 2 component declined by −18 % to −28 % over most regions. India, South America, and a part of Europe (particularly, Italy, France, and Spain) demonstrated a −40 % to −50 % urban emission decline. In contrast, the decline over urban areas in China, where the lockdown was over during the analysed period, was, on average, only -4.4± 8 %. Emissions from large industrial sources in the analysed urban areas varied greatly from region to region from -4.8 ± 6 % for China to -40 ± 10 % for India. Estimated changes in urban emissions are correlated with changes in Google mobility data (the correlation coefficient is 0.62) confirming that changes in traffic were one of the key elements in the decline in urban NO2 emissions. No correlation was found between changes in background NO2 and Google mobility data. On the global scale, the background and urban components were remarkably stable in 2018, 2019, and 2021, with averages of all analysed areas all being within ±2.5 % and suggesting that there were no substantial drifts or shifts in TROPOMI data. The 2020 data are clearly an outlier: in 2020, the mean background component for all analysed areas (without China) was -6.0 % ± 1.2 % and the mean urban component was -26.7 ± 2.6 % or 20σ below the baseline level from the other years.

COVID-19↗

Covid-19 Impact Monitoring for Climate Environment (Greenhouse Gases)

To track atmospheric CO2 changes resulting from the lockdowns, observations collected by the NASA Orbiting Carbon Observatory-2 (OCO-2) satellite and Japan’s Greenhouse gases Observing SATellite (GOSAT) in 2020 were compared to results collected in previous years. The OCO-2 results were used to search for changes on regional scales over the globe. Targeted observations from GOSAT were used to track changes in large urban areas, such as Beijing and Tokyo. Both types of observations yielded key insights into the CO2 changes accompanying the economic disruptions caused by the COVID-19 lockdowns. ESA, NASA and JAXA developed the dashboard jointly to monitor the climate impacts of COVID-19.

greenhouse gases↗

Revised estimates of NO 2 reductions during the COVID-19 lockdowns using updated TROPOMI NO 2 retrievals and model simulations

The TROPOspheric Monitoring Instrument (TROPOMI) observed unprecedented declines in NO 2 vertical column densities (VCD) over the world's most densely populated cities during the 2020 COVID-19 lockdowns. These favorable changes in NO 2 air quality were correlated with sharp reductions in traffic volume and economic activity during the lockdowns. In this comprehensive global study, we provide revised estimates of the declines in anthropogenic emissions for 36 megacities using a novel methodology for disentangling the anthropogenic emissions from the meteorological transport and natural variability. We further quantify the uncertainty associated with changes in the a priori profile shape information during the lockdowns due to reduced emissions. Satellite NO 2 retrieval techniques calculate an air mass factor that requires a priori NO 2 profile shape information representative of the local atmosphere. This information, which is typically obtained from a chemical transport model (CTM), was not available for the early studies. This study also accounts for the satellite sampling errors resulting from the selective sampling of non-cloudy scenes during the study period. For our analysis, we used CTM simulations that were generated with and without COVID-impacted emissions. We perform retrievals of tropospheric NO 2 columns with the NASA NO 2 algorithm, and then use observed and simulated data to disentangle the meteorological transport from the contribution due anthropogenic emissions. We found that the meteorological transport was most significant source of variability ranging between −35% and 22% of the change total tropospheric VCD. We also find that not accounting for changes in the a priori NO 2 profile shape information during the lockdowns resulted in systematic retrieval errors that were up to 12% of the estimated decline, and the elimination of cloud contaminated scenes resulted in sampling errors that in general ranged between varied ±15%.

NO2↗

Quantifying Movement Motivations, Demand, and Inflow-Outflow Dynamics in Four Cities (New York, Chicago, Austin, and San Diego) During COVID-19: Preprint

COVID-19 has impacted human activities ranging from food delivery habits to major moving and travel decisions. It’s clear that multiple pandemic-related factors have influenced millions of relocation decisions by Americans (e.g. health risk, financial pressures, more space, employment). There are positive economic and social outcomes of this influence (e.g. remote work and education) enabling more affordable living and opportunity. This paper addresses COVID-19 impacts on mobility, especially the mobility that involves permanent relocation from place to place. Survey design and data analysis with U-Haul targeted customers in Austin, New York, San Diego, and Chicago to understand mobility, new moving dynamics, and motivations.

ADVANCED PROPULSION SYSTEMS↗

A prospective study on myocardial injury after BNT162b2 mRNA COVID ‐19 fourth dose vaccination in healthy persons

Aims To prospectively evaluate the incidence of myocardial injury after the administration of the fourth dose BNT162b2 mRNA vaccine (Pfizer‐BioNTech) against COVID‐19. Methods and results Health care workers who received the BNT162b2 vaccine during the fourth dose campaign had blood samples collected for high‐sensitivity cardiac troponin (hs‐cTn) during vaccine administration and 2–4 days afterward. Vaccine‐related myocardial injury was defined as hs‐cTn elevation above the 99th percentile upper reference limit and >50% increase from baseline measurement. Participants with evidence of myocardial injury underwent assessment for possible myocarditis. Of 324 participants, 192 (59.2%) were female and the mean age was 51.8 ± 15.0 years. Twenty‐one (6.5%) participants had prior COVID‐19 infection, the mean number of prior vaccine doses was 2.9 ± 0.4, and the median time from the last dose was 147 (142–157) days. Reported vaccine‐related adverse reactions included local pain at injection site in 57 (17.59%), fatigue in 39 (12.04%), myalgia in 32 (9.88%), sore throat in 21 (6.48%), headache in 18 (5.5%), fever ≥38°C in 16 (4.94%), chest pain in 12 (3.7%), palpitations in 7 (2.16%), and shortness of breath in one (0.3%) participant. Vaccine‐related myocardial injury was demonstrated in two (0.62%) participants, one had mild symptoms and one was asymptomatic; both had a normal electrocardiogram and echocardiography. Conclusion In a prospective investigation, an increase in serum troponin levels was documented among 0.62% of healthy health care workers receiving the fourth dose BNT162b2 vaccine. The two cases had mild or no symptoms and no clinical sequela. Clinical Trial Registration: ClinicalTrials.gov Identifier: NCT05308680.

Levi, Nir↗

Viral Dynamic Models During COVID‐19: Are We Ready for the Next Pandemic?

Mathematical models have been used for about 30 years to improve our understanding of virus-host interaction, in particular during chronic infections. During the COVID-19 pandemic, these models have been used to provide insights into the natural history of acute SARS-CoV-2 infection, optimize antiviral treatment strategies, understand factors associated with transmission, and optimize surveillance systems. The impact of modeling has been accelerated by the availability of unprecedented multidimensional immune data from animal and human systems, which enhanced partnerships between experimentalists and theorists and led to exciting new modeling and statistical developments. In this mini review, we examine the lessons learned from the COVID-19 pandemic and discuss the main insights provided by mathematical models of viral dynamics at the different stages of the outbreak. Although we focus on respiratory infection, we also consider the new areas for development in anticipation of future acute infections from new or reemerging pathogens.

59 BASIC BIOLOGICAL SCIENCES↗

Evolution of Intent and Social Influence Networks and Their Significance in Detecting COVID-19 Disinformation Actors on Social Media

Online disinformation actors are those individuals or bots who disseminate false or misleading information over social media, with the intent to sway public opinion in the information domain towards harmful social outcomes. Quantification of the degree to which users post or respond intentionally versus under social influence, remains a challenge, as individuals or organizations operating the profile are foreshadowed by their online persona. However, social influence has been shown to be measurable in the paradigm of information theory. In this paper, we introduce an information theoretic measure to quantify social media user intent, and then investigate the corroboration of intent with evolution of the social network and detection of disinformation actors related to COVID-19 discussions on Twitter. Our measurement of user intent utilizes an existing time series analysis technique for estimation of social influence using transfer entropy among the considered users. We have analyzed 4.7 million tweets originating from several countries of interest, during a 5 month period when the arrival of the first dose of COVID vaccinations were announced. Our key findings include evidence that: (i) a significant correspondence between intent and social influence; (ii) ranking over users by intent and social influence is unstable over time with evidence of shifts in the hierarchical structure; and (iii) both user intent and social influence are important when distinguishing disinformation actors from non-disinformation actors.

Gunaratne, Chathika↗

COVID-19 dynamics across the US: A deep learning study of human mobility and social behavior

This paper presents a deep learning framework for epidemiology system identification from noisy and sparse observations with quantified uncertainty. The proposed approach employs an ensemble of deep neural networks to infer the time-dependent reproduction number of an infectious disease by formulating a tensor-based multi-step loss function that allows us to efficiently calibrate the model on multiple observed trajectories. The method is applied to a mobility and social behavior-based SEIR model of COVID-19 spread. The model is trained on Google and Unacast mobility data spanning a period of 66 days, and is able to yield accurate future forecasts of COVID-19 spread in 203 US counties within a time-window of 15 days. Interestingly, a sensitivity analysis that assesses the importance of different mobility and social behavior parameters reveals that attendance of close places, including workplaces, residential, and retail and recreational locations, has the largest impact on the effective reproduction number. Furthermore, the model enables us to rapidly probe and quantify the effects of government interventions, such as lock-down and re-opening strategies. Taken together, the proposed framework provides a robust workflow for data-driven epidemiology model discovery under uncertainty and produces probabilistic forecasts for the evolution of a pandemic that can judiciously provide information for policy and decision making. All codes and data accompanying this manuscript are available at https://github.com/PredictiveIntelligenceLab/DeepCOVID19.

60 APPLIED LIFE SCIENCES↗

Systematic Screening of COVID-19 Disease Based on Chest CT and RT-PCR for Cancer Patients Undergoing Radiation Therapy in a Coronavirus French Hotspot

Patients with cancer are presumed to be more vulnerable to COVID-19. We evaluated a screening strategy combining chest computed tomography (CT) and reverse-transcription polymerase chain reaction (RT-PCR) for patients treated with radiation therapy at our cancer center located in a COVID-19 French hotspot during the first wave of the pandemic.

62 RADIOLOGY AND NUCLEAR MEDICINE↗

Large Deviations Anomaly Detection (LAD) for collection of multivariate time series data: Applications to COVID-19 data

Time series anomaly detection is frequently used to identify extreme behaviors within a single time series. Identifying extreme trends in relation to a collection of other time series, on the other hand, is frequently of significant interest, such as in public health policy, social justice, and pandemic propagation. Using concepts from large deviations theory , we propose an algorithm that can scale to large collections of time series data. This paper expands on the LAD algorithm presented in Guggilam et al. (2022). The proposed algorithm is an online anomaly detection method for identifying anomalies in a collection of multivariate time series that takes advantage of the algorithm’s ability to scale to high-dimensional data. We show how the proposed Large Deviations Anomaly Detection (LAD) algorithm can be used to identify regions with anomalous trends in COVID-19 cases, deaths, biweekly growth rates, vaccinations, and fatality rates. Several of the observed anomalous trends are associated with regions that have demonstrated poor response to the COVID pandemic.

97 MATHEMATICS AND COMPUTING↗

Identification of a pharmacological approach to reduce ACE2 expression and development of an in vitro COVID-19 viral entry model

Because of rapid emergence and circulation of the SARS-CoV-2 variants, especially Omicron which shows increased transmissibility and resistant to antibodies, there is an urgent need to develop novel therapeutic drugs to treat COVID-19. In this study we developed an in vitro cellular model to explore the regulation of ACE2 expression and its correlation with ACE2-mediated viral entry. We examined ACE2 expression in a variety of human cell lines, some of which are commonly used to study SARS-CoV-2. Using the developed model, we identified a number of inhibitors which reduced ACE2 protein expression. The greatest reduction of ACE2 expression was observed when CK869, an inhibitor of the actin-related protein 2/3 (ARP2/3) complex, was combined with 5-(N-ethyl-N-isopropyl)-amiloride (EIPA), an inhibitor of sodium-hydrogen exchangers (NHEs), after treatment for 24 h. Using pseudotyped lentivirus expressing the SARS-CoV-2 full-length spike protein, we found that ACE2-dependent viral entry was inhibited in CK869 + EIPA-treated Calu-3 and MDA-MB-468 cells. This study provides an in vitro model that can be used for the screening of novel therapeutic candidates that may be warranted for further pre-clinical and clinical studies on COVID-19 countermeasures.

59 BASIC BIOLOGICAL SCIENCES↗

SARS-CoV-2 RNA in Wastewater Settled Solids Is Associated with COVID-19 Cases in a Large Urban Sewershed

Wastewater-based epidemiology may be useful for informing public health response to viral diseases like COVID-19 caused by SARS-CoV-2. Here, we quantified SARS-CoV-2 RNA in wastewater influent and primary settled solids in two wastewater treatment plants to inform the preanalytical and analytical approaches and to assess whether influent or solids harbored more viral targets. The primary settled solids samples resulted in higher SARS-CoV-2 detection frequencies than the corresponding influent samples. Likewise, SARS-CoV-2 RNA was more readily detected in solids using one-step digital droplet (dd)RT-PCR than with two-step RT-QPCR and two-step ddRT-PCR, likely owing to reduced inhibition with the one-step ddRT-PCR assay. We subsequently analyzed a longitudinal time series of 89 settled solids samples from a single plant for SARS-CoV-2 RNA as well as coronavirus recovery (bovine coronavirus) and fecal strength (pepper mild mottle virus) controls. SARS-CoV-2 RNA targets N1 and N2 concentrations correlated positively and significantly with COVID-19 clinically confirmed case counts in the sewershed. Together, the results demonstrate that measuring SARS-CoV-2 RNA concentrations in settled solids may be a more sensitive approach than measuring SARS-CoV-2 in influent.

54 ENVIRONMENTAL SCIENCES↗

The Climate Response to Emissions Reductions Due to COVID-19: Initial Results From CovidMIP

Many nations responded to the COVID-19 pandemic by restricting travel and other activities during 2020, resulting in temporarily reduced emissions of CO 2 , other greenhouse gases and ozone and aerosol precursors. We perform a coordinated Intercomparison, CovidMIP, of Earth System model simulations to assess the impact on climate of these emissions reductions. Eleven models performed multiple initial-condition ensembles to produce over 280 simulations spanning both initial condition and model structural uncertainty. We find model consensus on reduced aerosol amounts (particularly over East Asia) and associated increases in surface shortwave radiation levels. However, any impact on near-surface temperature or rainfall during 2020-2024 is extremely small and is not detectable in this initial analysis. Regional analyses on a finer scale, and closer attention to extremes (especially linked to changes in atmospheric composition and air quality) are required to test the impact of COVID-19-related emission reductions on near-term climate.

54 ENVIRONMENTAL SCIENCES↗

Shaping the Future of Science: COVID‐19 Highlighting the Importance of GeoHealth

Abstract From the heated debates over the airborne transmission of the novel coronavirus to the abrupt Earth system changes caused by the sudden lockdowns, the dire circumstances resulting from the coronavirus disease 2019 (COVID‐19) pandemic have brought the field of GeoHealth to the forefront of visibility in science and policy. The pandemic has inadvertently provided an opportunity to study how human response has impacted the Earth system, how the Earth system may impact the pandemic, and the capacity of GeoHealth to inform real‐time policy. The lessons learned throughout our responses to the COVID‐19 pandemic are shaping the future of GeoHealth.

60 APPLIED LIFE SCIENCES↗

Abrupt emissions reductions during COVID-19 contributed to record summer rainfall in China

Record rainfall and severe flooding struck eastern China in the summer of 2020. The extreme summer rainfall occurred during the COVID-19 pandemic, which started in China in early 2020 and spread rapidly across the globe. By disrupting human activities, substantial reductions in anthropogenic emissions of greenhouse gases and aerosols might have affected regional precipitation in many ways. Here, we investigate such connections and show that the abrupt emissions reductions during the pandemic strengthened the summer atmospheric convection over eastern China, resulting in a positive sea level pressure anomaly over northwestern Pacific Ocean. The latter enhanced moisture convergence to eastern China and further intensified rainfall in that region. Modeling experiments show that the reduction in aerosols had a stronger impact on precipitation than the decrease of greenhouse gases did. We conclude that through abrupt emissions reductions, the COVID-19 pandemic contributed importantly to the 2020 extreme summer rainfall in eastern China.

54 ENVIRONMENTAL SCIENCES↗