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Search indexed NASA NTRS and DOE OSTI research on propulsion, heat transfer, battery materials and energy systems. Follow report and document links to the original sources.

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At least 181 records · Page 10

Using computational singular perturbation as a diagnostic tool in ODE and DAE systems: a case study in heterogeneous catalysis

We have extended the computational singular perturbation (CSP) method to differential algebraic equation (DAE) systems and demonstrated its application in a heterogeneous-catalysis problem. The extended method obtains the CSP basis vectors for DAEs from a reduced Jacobian matrix that takes the algebraic constraints into account. Here we use a canonical problem in heterogeneous catalysis, the transient continuous stirred tank reactor (T-CSTR), for illustration. The T-CSTR problem is modelled fundamentally as an ordinary differential equation (ODE) system, but it can be transformed to a DAE system if one approximates typically fast surface processes using algebraic constraints for the surface species. We demonstrate the application of CSP analysis for both ODE and DAE constructions of a T-CSTR problem, illustrating the dynamical response of the system in each case. We also highlight the utility of the analysis in commenting on the quality of any particular DAE approximation built using the quasi-steady state approximation (QSSA), relative to the ODE reference case.

97 MATHEMATICS AND COMPUTING↗

El valor de los metadatos para las estaciones de recuperación de recursos del agua

Spanish: Los metadatos hacen referencia a información descriptiva (como ubicación del sensor, unidad de medida, rango de medida, fecha de calibración, fecha de limpieza, si ocurrió algún evento como episodio de lluvia/fallo operativo/vertido tóxico . . .) que es esencial para convertir los grandes volúmenes de datos que se recogen actualmente en las instalaciones de tratamiento de agua y que están sin procesar en información y recursos útiles. Con el avance de la digitalización en el sector del agua, es fundamental evitar los cementerios de datos y, por otro lado, utilizar los datos almacenados para resolver problemas actuales y futuros. Este artículo se centra en el papel crucial que tienen los metadatos para responder a desafíos futuros y posiblemente impredecibles. El objetivo de este documento es presentar el ‘reto de los metadatos’ y destacar la necesidad de tener en cuenta los metadatos cuando se recoge información como parte de las buenas prácticas de digitalización. English: Metadata refers to descriptive information (such as sensor location, measurement unit, measurement range, calibration date, cleaning date, if any event occurred such as rain event/operating failure/toxic spill, . . .) essential to convert large volumes of raw data that are currently collected at water treatment facilities into useful information and resources. With the advance of digitalization in the water sector, it is fundamental to avoid data graveyards and, on the other hand, using collected data to address current and future problems. This paper focuses on the crucial role that metadata has in responding to future and possibly unpredictable challenges. The aim of this document is to present the ‘metadata challenge’ and to highlight the need to consider metadata when collecting information as part of good digitalization practices.

54 ENVIRONMENTAL SCIENCES↗

EVAP: A two-photon imaging tool to study conformational changes in endogenous Kv2 channels in live tissues

A primary goal of molecular physiology is to understand how conformational changes of proteins affect the function of cells, tissues, and organisms. Here, we describe an imaging method for measuring the conformational changes of the voltage sensors of endogenous ion channel proteins within live tissue, without genetic modification. We synthesized GxTX-594, a variant of the peptidyl tarantula toxin guangxitoxin-1E, conjugated to a fluorophore optimal for two-photon excitation imaging through light-scattering tissue. We term this tool EVAP (Endogenous Voltage-sensor Activity Probe). GxTX-594 targets the voltage sensors of Kv2 proteins, which form potassium channels and plasma membrane–endoplasmic reticulum junctions. GxTX-594 dynamically labels Kv2 proteins on cell surfaces in response to voltage stimulation. To interpret dynamic changes in fluorescence intensity, we developed a statistical thermodynamic model that relates the conformational changes of Kv2 voltage sensors to degree of labeling. We used two-photon excitation imaging of rat brain slices to image Kv2 proteins in neurons. We found puncta of GxTX-594 on hippocampal CA1 neurons that responded to voltage stimulation and retain a voltage response roughly similar to heterologously expressed Kv2.1 protein. Our findings show that EVAP imaging methods enable the identification of conformational changes of endogenous Kv2 voltage sensors in tissue.

59 BASIC BIOLOGICAL SCIENCES↗

Two datasets are better than one: method of double moments for 3D reconstruction in cryo-EM

Cryo-electron microscopy is a powerful imaging technique for reconstructing three-dimensional molecular structures from noisy tomographic projection images of randomly oriented particles. We introduce a new data fusion framework, termed the method of double moments, which reconstructs molecular structures from two instances of the second-order moment of projection images obtained under distinct orientation distributions: one uniform, the other non-uniform and unknown. We prove that these moments generically uniquely determine the underlying structure, up to a global rotation and reflection, and we develop a convex-relaxation-based algorithm that achieves accurate recovery using only second-order statistics. Our results demonstrate the advantage of collecting and modeling multiple datasets under different experimental conditions, illustrating that leveraging dataset diversity can substantially enhance reconstruction quality in computational imaging tasks.

Kam’s method↗

Multiply-excited states and their contribution to opacity in CO 2 laser-driven tin-plasma conditions

A recent study (2020 Nat. Commun. 11 2334) has found that transitions between multiply-excited configurations in open 4d-subshell tin ions are the dominant contributors to intense EUV emission from dense, Nd:YAG-driven (laser wavelength λ = 1.064 μm) tin plasmas. In the present study, we employ the Los Alamos Atomic code to investigate the spectral contribution from these transitions under industrially-relevant, CO 2 laser-driven (λ = 10.6 μm) tin plasma conditions. First, we employ Busquet's ionisation temperature method to match the average charge state < Z > of a non-local-thermodynamic equilibrium (non-LTE) plasma with an LTE one. This is done by varying the temperature of the LTE calculations until a so-called ionisation temperature T Z is established. Importantly, this approach generates LTE-computed configuration populations in excellent agreement with the non-LTE populations. A corollary of this observation is that the non-LTE populations are well-described by Boltzmann-type exponential distributions having effective temperatures T eff ≈ T Z . In the second part of this work, we perform extensive level-resolved LTE opacity calculations at T Z . It is found that 66% of the opacity in the industrially-relevant 2% bandwidth centred at 13.5 nm arises from transitions between multiply-excited states. These results reinforce the need for the consideration of complex, multiply-excited states in modelling the radiative properties of laser-driven plasma sources of EUV light.

74 ATOMIC AND MOLECULAR PHYSICS↗

Boosting engine performance with Bose–Einstein condensation

Abstract At low-temperatures a gas of bosons will undergo a phase transition into a quantum state of matter known as a Bose–Einstein condensate (BEC), in which a large fraction of the particles will occupy the ground state simultaneously. Here we explore the performance of an endoreversible Otto cycle operating with a harmonically confined Bose gas as the working medium. We analyze the engine operation in three regimes, with the working medium in the BEC phase, in the gas phase, and driven across the BEC transition during each cycle. We find that the unique properties of the BEC phase allow for enhanced engine performance, including increased power output and higher efficiency at maximum power.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗

Vectorization techniques for probability distribution functions using VecCore

Probability distribution functions (PDFs) are very used in modeling random processes and physics simulations. Improving the performance of algorithms that generate many random numbers under complex PDFs is often a very challenging task when methods as direct functions are not available. In this work we present general strategies on how to vectorize some PDFs using VecCore library. We show the results for the Exponential, Gaussian, discrete Poisson and Gamma probability distributions.

Chaparro Amaro, Oscar R.↗

Skipper-CCD sensors for the Oscura experiment: requirements and preliminary tests

Oscura is a proposed multi-kg skipper-CCD experiment designed for a dark matter (DM) direct detection search that will reach unprecedented sensitivity to sub-GeV DM-electron interactions with its 10 kg detector array. Oscura is planning to operate at SNOLAB with 2070 m overburden, and aims to reach a background goal of less than one event in each electron bin in the 2–10 electron ionization-signal region for the full 30 kg-year exposure, with a radiation background rate of 0.01 dru.[1 dru (differential rate unit) corresponds to 1 event/kg/day/keV.] In order to achieve this goal, Oscura must address each potential source of background events, including instrumental backgrounds. In this work, we discuss the main instrumental background sources and the strategy to control them, establishing a set of constraints on the sensors' performance parameters. We present results from the tests of the first fabricated Oscura prototype sensors, evaluate their performance in the context of the established constraints and estimate the Oscura instrumental background based on these results.

46 INSTRUMENTATION RELATED TO NUCLEAR SCIENCE AND ↗

Disentangling cation effects on ion mobility and structure in ionic liquid electrolytes

Ionic liquids (ILs) are low-temperature molten salts, where ion transport is primarily governed by ion–ion interactions. Yet, the impact of organic IL cations on critical electrolyte properties such as ion dissociation and overall transport behavior in lithium-salt-doped ILs remains poorly understood. Moreover, despite their critical role in designing IL-based electrolytes for energy storage applications, ion–ion interactions and ion-specific transport under an applied electrical potential are seldom quantified, largely due to the unique experimental and computational challenges involved. Herein, we compare transport properties obtained using 1 H, 7 Li, and 19 F pulsed-field gradient nuclear magnetic resonance (NMR) and electrophoretic NMR (eNMR) with those measured by electrochemical impedance spectroscopy. Non-equilibrium molecular dynamics (MD) simulations and eNMR confirm the presence of negatively charged [Li(TFSI) n ] (1−n) aggregates that migrate towards the positive electrode, resulting in negative lithium transference numbers. Equilibrium MD simulations reveal a vehicular Li ion transport mechanism facilitated by long-lived aggregates with Li + cations strongly bound to multiple TFSI − anions. Finally, we observe an inverse relationship between the apparent charge of the TFSI − anion in the neat IL, which is dictated by the IL cation, and Li + transport in the salt-doped systems. This highlights the opportunity to tune electrolyte performance by tailoring cation chemistry.

Li-ion batteries↗

Heat exposure and maternal stress: evidence from the GRAPHS pregnancy cohort in Ghana

Heat exposure has been linked to psychosocial stress, an established antecedent of perinatal depression; however, evidence on heat-related stress during pregnancy in sub-Saharan Africa remains limited. We analyzed psychosocial stress scores and covariate data from the Ghana Randomized Air Pollution and Health Study, linking daily maximum and minimum shaded wet bulb globe temperature (WBGT) metrics to participants’ stress scores derived from the Crisis in Family Systems-Revised Life Events Questionnaire. We evaluated associations using ordinal logistic regression of pregnancy-average and trimester-average exposures and distributed lag non-linear models (DLNMs) to assess time-varying associations across gestation. Higher average maximum WBGT exposure across pregnancy was associated with increased odds of higher psychosocial stress; each 1 °C increase in maximum WBGT was associated with 64% higher odds of belonging to a higher stress category (OR = 1.64; 95% CI = 1.17–2.31; p = 0.0040). In trimester-average models, higher first-trimester maximum WBGT was also associated with higher stress (OR = 1.44; 95% CI = 1.15–1.81; p = 0.0014). DLNMs suggested that relatively cooler daily maximum WBGT values (25th percentile) were associated with decreased odds of stress in early pregnancy, whereas extreme daily maximum WBGT values (99th percentile) showed a pattern consistent with increased odds of stress in mid-to-late gestation. These findings highlight gestational windows in which heat exposure may influence stress, emphasizing the need for further research into underlying mechanisms and effective interventions to protect maternal mental health in heat-vulnerable settings.

White, Lewis [Columbia University] (ORCID:00090005↗

TranSyT , an innovative framework for identifying transport systems

The importance and rate of development of genome-scale metabolic models have been growing for the last few years, increasing the demand for software solutions that automate several steps of this process. However, since TRIAGE’s release, software development for the automatic integration of transport reactions into models has stalled. Here, in this paper, we present the Transport Systems Tracker (TranSyT). Unlike other transport systems annotation software, TranSyT does not rely on manual curation to expand its internal database, which is derived from highly curated records retrieved from the Transporters Classification Database and complemented with information from other data sources. TranSyT compiles information regarding transporter families and proteins, and derives reactions into its internal database, making it available for rapid annotation of complete genomes. All transport reactions have GPR associations and can be exported with identifiers from four different metabolite databases. TranSyT is currently available as a plugin for merlin v4.0 and an app for KBase.

59 BASIC BIOLOGICAL SCIENCES↗

Zero-truncated Poisson regression for sparse multiway count data corrupted by false zeros

Abstract We propose a novel statistical inference methodology for multiway count data that is corrupted by false zeros that are indistinguishable from true zero counts. Our approach consists of zero-truncating the Poisson distribution to neglect all zero values. This simple truncated approach dispenses with the need to distinguish between true and false zero counts and reduces the amount of data to be processed. Inference is accomplished via tensor completion that imposes low-rank tensor structure on the Poisson parameter space. Our main result shows that an $N$-way rank-$R$ parametric tensor $\boldsymbol{\mathscr{M}}\in (0,\infty )^{I\times \cdots \times I}$ generating Poisson observations can be accurately estimated by zero-truncated Poisson regression from approximately $IR^2\log _2^2(I)$ non-zero counts under the nonnegative canonical polyadic decomposition. Our result also quantifies the error made by zero-truncating the Poisson distribution when the parameter is uniformly bounded from below. Therefore, under a low-rank multiparameter model, we propose an implementable approach guaranteed to achieve accurate regression in under-determined scenarios with substantial corruption by false zeros. Several numerical experiments are presented to explore the theoretical results.

97 MATHEMATICS AND COMPUTING↗

Atmospheric methane consumption in arid ecosystems acts as a reverse chimney and is accelerated by plant-methanotroph biomes

Drylands cover one-third of the Earth’s surface and are one of the largest terrestrial sinks for methane. Understanding the structure–function interplay between members of arid biomes can provide critical insights into mechanisms of resilience toward anthropogenic and climate-change-driven environmental stressors—water scarcity, heatwaves, and increased atmospheric greenhouse gases. This study integrates in situ measurements with culture-independent and enrichment-based investigations of methane-consuming microbiomes inhabiting soil in the Anza-Borrego Desert, a model arid ecosystem in Southern California, United States. The atmospheric methane consumption ranged between 2.26 and 12.73 μmol m 2 h −1 , peaking during the daytime at vegetated sites. Metagenomic studies revealed similar soil-microbiome compositions at vegetated and unvegetated sites, with Methylocaldum being the major methanotrophic clade. Eighty-four metagenome-assembled genomes were recovered, six represented by methanotrophic bacteria (three Methylocaldum , two Methylobacter , and uncultivated Methylococcaceae ). The prevalence of copper-containing methane monooxygenases in metagenomic datasets suggests a diverse potential for methane oxidation in canonical methanotrophs and uncultivated Gammaproteobacteria. Five pure cultures of methanotrophic bacteria were obtained, including four Methylocaldum . Genomic analysis of Methylocaldum isolates and metagenome-assembled genomes revealed the presence of multiple stand-alone methane monooxygenase subunit C paralogs, which may have functions beyond methane oxidation. Furthermore, these methanotrophs have genetic signatures typically linked to symbiotic interactions with plants, including tryptophan synthesis and indole-3-acetic acid production. Based on in situ fluxes and soil microbiome compositions, we propose the existence of arid-soil reverse chimneys, an empowered methane sink represented by yet-to-be-defined cooperation between desert vegetation and methane-consuming microbiomes.

59 BASIC BIOLOGICAL SCIENCES↗

Cherenkov Telescope Array sensitivity to the putative millisecond pulsar population responsible for the Galactic Centre excess

ABSTRACT The leading explanation of the Fermi Galactic Centre γ-ray excess is the extended emission from an unresolved population of millisecond pulsars (MSPs) in the Galactic bulge. Such a population would, along with the prompt γ-rays, also inject large quantities of electrons/positrons (e±) into the interstellar medium. These e± could potentially inverse-Compton (IC) scatter ambient photons into γ-rays that fall within the sensitivity range of the upcoming Cherenkov Telescope Array (CTA). In this article, we examine the detection potential of CTA to this signature by making a realistic estimation of the systematic uncertainties on the Galactic diffuse emission model at TeV-scale γ-ray energies. We forecast that, in the event that e± injection spectra are harder than E−2, CTA has the potential to robustly discover the IC signature of a putative Galactic bulge MSP population sufficient to explain the Galactic Centre excess for e± injection efficiencies in the range of ≈2.9–74.1 per cent, or higher, depending on the level of mismodelling of the Galactic diffuse emission components. On the other hand, for spectra softer than E−2.5, a reliable CTA detection would require an unphysically large e± injection efficiency of ${\gtrsim} 158{{\ \rm per\ cent}}$. However, even this pessimistic conclusion may be avoided in the plausible event that MSP observational and/or modelling uncertainties can be reduced. We further find that, in the event that an IC signal were detected, CTA can successfully discriminate between an MSP and a dark matter origin for the radiating e±.

79 ASTRONOMY AND ASTROPHYSICS↗

Evidence for a high-energy tail in the gamma-ray spectra of globular clusters

Millisecond pulsars are very likely the main source of gamma-ray emission from globular clusters. However, the relative contributions of two separate emission processes – curvature radiation from millisecond pulsar magnetospheres versus inverse Compton emission from relativistic pairs launched into the globular cluster environment by millisecond pulsars – have long been unclear. To address this, we search for evidence of inverse Compton emission in 8-yr Fermi–LAT data from the directions of 157 Milky Way globular clusters. We find a mildly statistically significant (3.8σ) correlation between the measured globular cluster gamma-ray luminosities and their photon field energy densities. However, this may also be explained by a hidden correlation between the photon field densities and the stellar encounter rates of globular clusters. Analysed in toto, we demonstrate that the gamma-ray emission of globular clusters can be resolved spectrally into two components: (i) an exponentially cut-off power law and (ii) a pure power law. The latter component – which we uncover at a significance of 8.2σ – has a power index of 2.79 ± 0.25. It is most naturally interpreted as inverse Compton emission by cosmic-ray electrons and positrons injected by millisecond pulsars. Here, we find the luminosity of this power-law component is comparable to, or slightly smaller than, the luminosity of the curved component, suggesting the fraction of millisecond pulsar spin-down luminosity into relativistic leptons is similar to the fraction of the spin-down luminosity into prompt magnetospheric radiation.

79 ASTRONOMY AND ASTROPHYSICS↗

The Andromeda gamma-ray excess: background systematics of the millisecond pulsars and dark matter interpretations

ABSTRACT Since the discovery of an excess in gamma rays in the direction of M31, its cause has been unclear. Published interpretations focus on dark matter or stellar related origins. Studies of a similar excess in the Milky Way centre motivate a correlation of the spatial morphology of the signal with the distribution of stellar mass in M31. However, a robust determination of the best theory for the observed excess emission is challenging due to uncertainties in the astrophysical gamma-ray foreground model. We perform a spectro-morphological analysis of the M31 gamma-ray excess using state-of-the-art templates for the distribution of stellar mass in M31 and novel astrophysical foreground models for its sky region. We construct maps for the old stellar populations of M31 based on data from the PAndAS survey and carefully remove the foreground stars. We also produce improved astrophysical foreground models via novel image inpainting techniques based on machine learning methods. Our stellar maps, mimicking the location of a population of millisecond pulsars in the bulge of M31, reach a 5.4σ significance, making them as strongly favoured as the simple phenomenological models usually considered in the literature, e.g. disc-like templates. This detection is robust to generous variations of the astrophysical foreground model. Once the stellar templates are included in the astrophysical model, we show that the dark matter annihilation interpretation of the signal is unwarranted. We demonstrate that about one million unresolved millisecond pulsars naturally explain the observed gamma-ray luminosity per stellar mass, energy spectrum, and stellar bulge-to-disc flux ratio.

79 ASTRONOMY AND ASTROPHYSICS↗