Search NASA⌕ Search

SEARCH · Search NASA

Results for “Soil functions”

Search indexed NASA NTRS and DOE OSTI research on propulsion, heat transfer, battery materials and energy systems. Follow report and document links to the original sources.

Quote a phrase for an exact phrase match. Source license links do not imply unrestricted reuse.

At least 181 records · Page 10

Comparison of surface fluxes and conductances at two contrasting sites within the FIFE area

Surface flux measurements from two contrasting sites within the FIFE study area are analyzed. The seasonal variation of midday latent heat fluxes and surface conductances at the two sites was found to be very similar even though the ratio of their average total leaf area indices was greater than two to one. Concurrent measurements made at another six flat sites within the FIFE area confirmed the independence of latent heat flux with respect to leaf area index. The surface conductance stress function related to specific humidity deficit was the same for the two sites, whereas the solar radiation stress function showed a difference of 30 percent at a solar radiation input of 300 W/sq m and the soil moisture stress function showed a difference of 16 percent when half the extractable soil moisture had been taken up. However, when the stress functions were combined to determine the surface conductance, these differences virtually canceled out.

Stewart, J. B.↗

Eco-evolutionary strategies for relieving carbon limitation under salt stress differ across microbial clades

With the continuous expansion of saline soils under climate change, understanding the eco-evolutionary tradeoff between the microbial mitigation of carbon limitation and the maintenance of functional traits in saline soils represents a significant knowledge gap in predicting future soil health and ecological function. Through shotgun metagenomic sequencing of coastal soils along a salinity gradient, we show contrasting eco-evolutionary directions of soil bacteria and archaea that manifest in changes to genome size and the functional potential of the soil microbiome. In salt environments with high carbon requirements, bacteria exhibit reduced genome sizes associated with a depletion of metabolic genes, while archaea display larger genomes and enrichment of salt-resistance, metabolic, and carbon-acquisition genes. This suggests that bacteria conserve energy through genome streamlining when facing salt stress, while archaea invest in carbon-acquisition pathways to broaden their resource usage. These findings suggest divergent directions in eco-evolutionary adaptations to soil saline stress amongst microbial clades and serve as a foundation for understanding the response of soil microbiomes to escalating climate change.

54 ENVIRONMENTAL SCIENCES↗

Maximum entropy modeling to identify physical drivers of shallow snowpack heterogeneity using unpiloted aerial system (UAS) lidar

Understanding the spatial variability of the snowpack is valuable for hydrologists and ecologists seeking to predict hydrological processes in a cold region. Snow distribution is a function of interactions among static variables, such as terrain, vegetation, and soil properties, and dynamic meteorological variables, such as solar radiation, wind speed and direction, and soil moisture. However, identifying the dominant physical drivers responsible for spatial patterns of the snowpack, particularly for ephemeral, shallow snowpacks, has been challenging due to the lack of the high-resolution snowpack and physical variables with high vertical accuracy as well as inherent limitations in traditional approaches. This study uses an Unpiloted Aerial System (UAS) lidar-based snow depth and static variables (1-m spatial resolution) to analyze field-scale spatial structures of snow depth and apply the Maximum Entropy (MaxEnt) model to identify primary controls over open terrain and forests at the University of New Hampshire Thompson Farm Research Observatory, New Hampshire, United States. We found that, among nine topographic and soil variables, plant functional type and terrain roughness contribute up to 80% and 76% of relative importance in the MaxEnt framework to predict locations of deeper or shallower snowpacks, respectively, across a mixed temperate forested and field landscape. Soil variables, such as organic matter and saturated hydraulic conductivity, were also important controls (up to 70% and 81%) on snow depth spatial variations for both open and forested landscapes suggesting spatial variations in soil variables under snow can control thermal transfer among soil, snowpack, and surface-atmosphere. This work contributes to improving land surface and snow models by informing parameterization of the sub-grid scale snow depths, down-scaling remotely sensed snow products, and understanding field scale snow states.

Eunsang Cho↗

Enhancing climate-smart crop performance in arid agrivoltaics systems: effects of photovoltaic shading and soil amendments on tepary bean growth, yield, and associated soil microbiome

As climate change expands the world’s arid and semiarid regions, sustainable systems that integrate food and energy production are becoming increasingly critical. Agrivoltaics—co-locating crops with photovoltaic (PV) panels—offers a dual land-use strategy that mitigates environmental stress by shading crops, conserving soil moisture, and enhancing PV efficiency. While climate-smart crops like the tepary bean ( Phaseolus acutifolius ) are well adapted to heat and drought, little is known about how these crops and their associated soil microbiomes respond to the unique microclimates created by PV shading. This study evaluated tepary bean performance and plant–microbial interactions under PV-shade vs. no shade across three soil amendment treatments at two experimental sites. We assessed plant traits including germination, phenology, biomass, height, as well as yield and bean morphology, alongside shifts in soil microbial composition and functional potential. Plants grown under PV-shade were generally taller, with extended reproductive periods and higher yields: 42% of shaded plants produced beans compared to only 8% under full sun. Shaded plants also produced rounder, higher-quality beans, whereas non-shaded plants yielded flatter, less developed beans. Microbial community composition was more strongly influenced by amendment and site conditions than by shading alone. Key microbial taxa (e.g., Glomeromycetes, Desulfobacterota ) and predicted functions (e.g., denitrification, nitrogen-respiration, sulfate reduction) were associated with differences in plant performance. Finally, combining agrivoltaic systems with targeted soil amendments can enhance crop yield and soil microbial functionality—offering a promising strategy for sustainable agriculture in arid landscapes.

14 SOLAR ENERGY↗

Influence of living grass Roots and endophytic fungal hyphae on soil hydraulic properties

Soil hydraulic properties are often estimated based on laboratory data or pedotransfer functions dependent on soil physical properties, which often do not consider potential impacts of soil roots or fungal hyphae. Here, we first review current knowledge of how these soil biotic components affect hydraulic properties, then we conducted laboratory experiments to specifically test if the presence of roots and mycorrhizal fungi had a significant effect on the hydraulic properties of two soils with contrasting textures: Flint sand and Hamblen silt loam. Soil cores were seeded with (Panicum virgatum) and grown in a greenhouse over three separate growth periods. The endophytic fungus Serendipita indica was injected as liquid inoculant into designated mycorrhizal cores. Saturated hydraulic conductivity (K sat ) measurements were made with a constant head permeameter, and soil water retention curves were obtained by the evaporation method, supplemented at the dry end for Hamblen silt loam with water activity meter data. Retention curve parameters were obtained by fitting the van Genuchten equation to the resulting measurements. Mean root volume ratios were higher in the mycorrhizal inoculated treatment than in the uninoculated treatment for both soils. For Flint sand, analysis of variance revealed that K sat was reduced by the presence of roots as compared to bare soil. This was likely due to roots clogging soil pores. Results also indicated the presence of roots changed the shape of the water retention curve for Flint sand by increasing water content at saturation and by reducing the slope of the curve. These changes suggested roots created additional porosity and broadened the pore-size distribution. The presence of mycorrhizal fungi accentuated the root effects. The influence of roots and mycorrhizal fungi on hydraulic properties was less obvious for the Hamblen silt loam, as none of the treatments differed from each other at p < 0.05. The results highlight the necessity to consider the impact of root and fungal structures on models of soil hydraulic properties.

59 BASIC BIOLOGICAL SCIENCES↗

Soil Moisture Project Evaluation Workshop

Approaches planned or being developed for measuring and modeling soil moisture parameters are discussed. Topics cover analysis of spatial variability of soil moisture as a function of terrain; the value of soil moisture information in developing stream flow data; energy/scene interactions; applications of satellite data; verifying soil water budget models; soil water profile/soil temperature profile models; soil moisture sensitivity analysis; combinations of the thermal model and microwave; determing planetary roughness and field roughness; how crust or a soil layer effects microwave return; truck radar; and truck/aircraft radar comparison.

Gilbert, R. H.↗

Resistance, Resilience, and Recovery of Dryland Soil Bacterial Communities Across Multiple Disturbances

Dryland ecosystems are sensitive to perturbations and generally slow to recover post disturbance. The microorganisms residing in dryland soils are especially important as they contribute to soil structure and nutrient cycling. Disturbance can have particularly strong effects on dryland soil structure and function, yet the natural resistance and recovery of the microbial components of dryland soils has not been well documented. In this study, the recovery of surface soil bacterial communities from multiple physical and environmental disturbances is assessed. Samples were collected from three field sites in the vicinity of Moab, UT, United States, 6 to 7 years after physical and climate disturbance manipulations had been terminated, allowing for the assessment of community recovery. Additionally, samples were collected in a transect that included three habitat patches: the canopy zone soils under the dominant shrubs, the interspace soils that are colonized by biological soil crusts, and edge soils at the plot borders. Field site and habitat patch were significant factors structuring the bacterial communities, illustrating that sites and habitats harbored unique soil microbiomes. Across the different sites and disturbance treatments, there was evidence of significant bacterial community recovery, as bacterial biomass and diversity were not significantly different than control plots. There was, however, a small number of 16S rRNA gene amplicon sequence variants that distinguished particular treatments, suggesting that legacy effects of the disturbances still remained. Taken together, these data suggest that dryland bacterial communities may possess a previously unappreciated potential to recover within years of the original disturbance.

59 BASIC BIOLOGICAL SCIENCES↗

Depth-dependent Metagenome-Assembled Genomes of Agricultural Soils under Managed Aquifer Recharge

Abstract Managed Aquifer Recharge (MAR) systems, which intentionally replenish groundwater aquifers with excess water, are critical for addressing water scarcity exacerbated by demographic shifts and climate variability. To date, little is known about the functional diversity of the soil microbiome at different soil depth inhabiting agricultural soils used for MAR. Knowing the functional diversity is pivotal in regulating nutrient cycling and maintaining soil health. Metagenomics, particularly Metagenome-Assembled Genomes (MAGs), provide a powerful tool to explore the diversity of uncultivated soil microbes, facilitating in-depth investigations into microbial functions. In a field experiment conducted in a California vineyard, we sequenced soil DNA before and after water application of MAR. Through this process, we assembled 146 medium and 14 high-quality MAGs, uncovering a wide array of archaeal and bacterial taxa across different soil depths. These findings advance our understanding of the microbial ecology and functional diversity of soils used for MAR, contributing to the development of more informed and sustainable land management strategies.

Science & Technology - Other Topics↗

Bacterial and fungal growth on fungal necromass and its diverse components: Shared profiles and divergent constraints revealed by high‐throughput phenotyping

1. While fungal necromass is increasingly recognized as a major source of persistent carbon (C) in soils, the relative functional roles of bacteria and fungi in decomposing necromass are not fully resolved, and the processes that select for necromass decomposer communities from the broader soil microbial community are an emerging area of interest. 2. In this study, we characterized the growth of 52 bacterial and 83 fungal strains isolated from necromass and soil on 22 C substrates, including different necromass phenotypes, fungal cell wall polymers, dimers and monomers. 3. We found that the isolation habitat of the strains used in this experiment (necromass vs. soil) had no effect on the substrates they were able to use. Isolates from both microbial domains were able to grow on different labile carbon substrates, polymers and necromass phenotypes. However, fungal growth was most limited by necromass melanin content, while bacterial growth was more limited by the abundance of cell wall polysaccharides. Additionally, overall differences in substrate use between bacteria and fungi were most pronounced on polymer substrates. 4. Collectively, our results suggest that there is substantial functional overlap in necromass substrate use across microbial domains, but some notable differences in bacterial and fungal utilization of cell wall polymers, which can function as a direct energy source or a means of accessing other compounds within necromass. Future studies assessing bacteria and fungi decomposing necromass together rather than in isolation will help to uncover potential physical and chemical interactions within and between these two domains during the decay of this important source of persistent soil C.

dead fungal biomass↗

Quantitative genetic-by-soil microbiome interactions in a perennial grass affect functional traits

Plants interact with diverse microbiomes that can impact plant growth and performance. Recent studies highlight the potential beneficial aspects of plant microbiomes, including the possibility that microbes facilitate the process of local adaptation in their host plants. Microbially mediated local adaptation in plants occurs when local host genotypes have higher fitness than foreign genotypes because of their affiliation with locally beneficial microbes. Here, plant adaptation results from genetic interactions of the host with locally beneficial microbes (e.g. host genotype-by-microbiome interactions). We used a recombinant inbred line (RIL) mapping population derived from upland and lowland ecotypes of the diploid C4 perennial bunch grass Panicum hallii to explore quantitative genetic responses to soil microbiomes focusing on functional root and shoot traits involved in ecotypic divergence. We show that the growth and development of ecotypes and their trait divergence depends on soil microbiomes. Moreover, we find that the genetic architecture is modified by soil microbiomes, revealing important plant genotype-by-microbiome interactions for quantitative traits. We detected a number of quantitative trait loci (QTL) that interact with the soil microbiome. Our results highlight the importance of microbial interactions in ecotypic divergence and trait genetic architecture in C4 perennial grasses.

59 BASIC BIOLOGICAL SCIENCES↗

Permafrost microbial communities and functional genes are structured by latitudinal and soil geochemical gradients

Permafrost underlies approximately one quarter of Northern Hemisphere terrestrial surfaces and contains 25–50% of the global soil carbon (C) pool. Permafrost soils and the C stocks within are vulnerable to ongoing and future projected climate warming. The biogeography of microbial communities inhabiting permafrost has not been examined beyond a small number of sites focused on local-scale variation. Permafrost is different from other soils. Perennially frozen conditions in permafrost dictate that microbial communities do not turn over quickly, thus possibly providing strong linkages to past environments. Thus, the factors structuring the composition and function of microbial communities may differ from patterns observed in other terrestrial environments. Here, we analyzed 133 permafrost metagenomes from North America, Europe, and Asia. Permafrost biodiversity and taxonomic distribution varied in relation to pH, latitude and soil depth. The distribution of genes differed by latitude, soil depth, age, and pH. Genes that were the most highly variable across all sites were associated with energy metabolism and C-assimilation. Specifically, methanogenesis, fermentation, nitrate reduction, and replenishment of citric acid cycle intermediates. This suggests that adaptations to energy acquisition and substrate availability are among some of the strongest selective pressures shaping permafrost microbial communities. The spatial variation in metabolic potential has primed communities for specific biogeochemical processes as soils thaw due to climate change, which could cause regional- to global- scale variation in C and nitrogen processing and greenhouse gas emissions.

59 BASIC BIOLOGICAL SCIENCES↗

Land management effects on wet aggregate stability and carbon content

Land management affects soil structure and many other soil properties and processes. Our objectives were to evaluate soil organic C (SOC), aggregate size distribution, aggregate-associated C, and soil structure as affected by long-term land management and slope. A chronosequence of 38 on-farm sites with low to high (5–18%) slopes was selected to evaluate 5–40 yr of management. The sites were classified as business as usual (BAU) cropland (BAU-Crop), BAU pasture (BAU-Past), newly established conservation reserve program (CRP) areas (CRP-New), and established CRP (CRP-Old). Soil samples were collected from the 0-to-5- and 5-to-15-cm depth increments and processed for soil property measurements including fractionation by wet sieving into five aggregate size classes (>2,000, 1,000–2,000, 500–1,000, 250–500, and 53–250 μm). Within the surface 5 cm, mean weight diameter (MWD) and geometric mean diameter (GMD) were used to characterize soil structural stability. The BAU-Past and CRP-Old sites had 79% more macroaggregates (>2,000, 1,000–2,000, and 500–1,000 μm), 123% higher MWD, 38% higher GMD, and 47% higher SOC than BAU-Crop or CRP-New sites. The 5-to-15-cm depth increment showed a similar but lower magnitude response. Aggregate-associated C was quantified using a constant soil mass that reflected aggregate size distribution to prevent overestimating C content. Lower-slope locations had more SOC, more macroaggregates, more C associated with macroaggregates, and higher GMD and MWD compared with high-slope locations across all management classifications and soil depths. The results support our hypothesis that the high-slop soils may benefits from specific management decisions than the lower-sloping soils as a function of landscape property. We recommend reestablishing grassland on sloping land that is susceptible to excessive soil erosion, although those practices will likely take a long time to restore soil structural stability and SOC content to precultivation levels.

54 ENVIRONMENTAL SCIENCES↗

Radiobrightness of diurnally heated, freezing soil

Freezing and thawing soils exhibit unique radiometric characteristics. To examine these characteristics, diurnal insolation is modeled as one-dimensional heating of a moist soil half-space during a typical fall at a northern Great Plains site. The one-dimensional heat flow equation is nonlinear because both the enthalpy (the change in internal energy with temperature at constant pressure) and the thermal conductivity of freezing soils are nonlinear functions of temperature. The problem is particularly difficult because phase boundaries propagate in time, and because soils, particularly clay-rich soils, freeze over a range of temperatures rather than at 0 C. Diurnal radiobrightness curves at 10.7, 18.0, and 37.0-GHz were computed for each month. The 37.0-GHz radiobrightness best tracks soil surface temperature; the 10.7-37.0-GHz spectral gradient of thawed soils is strongly positive; the spectral gradient of frozen soils is slightly negative; and the midnight-to-noon spectral gradient is shifted by approximately +0.1 K/GHz by diurnal changes in the surface temperature and the thermal gradient. These observations support the use of the scanning multichannel microwave radiometer 37.0-GHz radiobrightness and its 10.7-37.0-GHz spectral gradient as discriminants in a frozen soil classifier for high-latitude prairie.

England, Anthony W.↗

A Radiative Transfer Model for Microwave Emission from Soils

The radiative transfer equation for an absorbing medium is used to develop a model for microwave emission from soils. The model calculates the microwave emission intensity in terms of the brightness temperature as a function of the soil moisture and temperature. The consistency of the model is verified by a comparative study of the present model with other microwave emission models. The effect of surface roughness on the brightness temperature is studied by modifying the Fresnel reflection coefficient and by including the surface depolarization effect. The quantitative effect of the surface roughness is studied and it is demonstrated that the brightness temperatures observed for a natural agricultural terrain can be explained through the inclusion of the roughness effect. The surface roughness effect is further analyzed to obtain formulae which are useful in the analysis of the brightness temperatures, particularly, to obtain soil moisture information from the brightness. temperatures. The sensitivity of the brightness temperature to the soil temperature variations is studied both qualitatively and quantitatively. A simple formula is obtained to calculate the soil temperature dependence of the brightness temperature in terms of the surface and the deep soil temperatures. An algorithm to normalize the brightness temperatures so as to compare microwave observations under different soil temperature conditions is also discussed. A program listing of the model is given in the appendix.

Choudhury, B. J.↗

Modeling the bidirectional reflectance distribution function of mixed finite plant canopies and soil

An analytical model of the bidirectional reflectance for optically semi-infinite plant canopies has been extended to describe the reflectance of finite depth canopies contributions from the underlying soil. The model depends on 10 independent parameters describing vegetation and soil optical and structural properties. The model is inverted with a nonlinear minimization routine using directional reflectance data for lawn (leaf area index (LAI) is equal to 9.9), soybeans (LAI, 2.9) and simulated reflectance data (LAI, 1.0) from a numerical bidirectional reflectance distribution function (BRDF) model (Myneni et al., 1988). While the ten-parameter model results in relatively low rms differences for the BRDF, most of the retrieved parameters exhibit poor stability. The most stable parameter was the single-scattering albedo of the vegetation. Canopy albedo could be derived with an accuracy of less than 5% relative error in the visible and less than 1% in the near-infrared. Sensitivity were performed to determine which of the 10 parameters were most important and to assess the effects of Gaussian noise on the parameter retrievals. Out of the 10 parameters, three were identified which described most of the BRDF variability. At low LAI values the most influential parameters were the single-scattering albedos (both soil and vegetation) and LAI, while at higher LAI values (greater than 2.5) these shifted to the two scattering phase function parameters for vegetation and the single-scattering albedo of the vegetation. The three-parameter model, formed by fixing the seven least significant parameters, gave higher rms values but was less sensitive to noise in the BRDF than the full ten-parameter model. A full hemispherical reflectance data set for lawn was then interpolated to yield BRDF values corresponding to advanced very high resolution radiometer (AVHRR) scan geometries collected over a period of nine days. The resulting parameters and BRDFs are similar to those for the full sampling geometry, suggesting that the limited geometry of AVHRR measurements might be used to reliably retrieve BRDF and canopy albedo with this model.

Schluessel, G.↗

Radar for Measuring Soil Moisture Under Vegetation

A two-frequency, polarimetric, spaceborne synthetic-aperture radar (SAR) system has been proposed for measuring the moisture content of soil as a function of depth, even in the presence of overlying vegetation. These measurements are needed because data on soil moisture under vegetation canopies are not available now and are necessary for completing mathematical models of global energy and water balance with major implications for global variations in weather and climate.

Moghaddam, Mahta↗