SEARCH · Search NASA

Results for “analyzable function”

Search indexed NASA NTRS and DOE OSTI research on propulsion, heat transfer, battery materials and energy systems. Follow report and document links to the original sources.

SourceResearch connectionFrom yearThrough year

Quote a phrase for an exact phrase match. Source license links do not imply unrestricted reuse.

At least 181 records · Page 10

All sources NASA NTRS DOE OSTI

DOE OSTI2018

Axially Symmetric Energy Analyzer Based on the Electrostatic Decapole-Cylindrical Field

A new electron-optical scheme of an axially symmetric mirror energy analyzer based on the electrostatic decapole-cylindrical field is presented. A trajectory analysis of electron motion is performed. Design features of the proposed energy analyzer scheme are described. Second-order focusing regimes for two configurations are numerically calculated: (1) a ring source and its image located in the region of the inner cylinder and (2) a point source located at a great distance from the energy analyzer on the symmetry axis. It is shown that on the basis of the decapole-cylindrical field, a long-focal-length mirror energy analyzer with “axis–ring” type focusing can be built. Instrumental functions for two regimes of the energy analyzer are given; energy resolution and luminosity of the device are estimated.

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗

DOE OSTI2023

Towards Quantum-Chemical Level Calculations of SARS-CoV-2 Spike Protein Variants of Concern by First Principles Density Functional Theory

The spike protein (S-protein) is a crucial part of the severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2), with its many domains responsible for binding, fusion, and host cell entry. In this review we use the density functional theory (DFT) calculations to analyze the atomic-scale interactions and investigate the consequences of mutations in S-protein domains. We specifically describe the key amino acids and functions of each domain, which are essential for structural stability as well as recognition and fusion processes with the host cell; in addition, we speculate on how mutations affect these properties. Such unprecedented large-scale ab initio calculations, with up to 5000 atoms in the system, are based on the novel concept of amino acid–amino acid-bond pair unit (AABPU) that allows for an alternative description of proteins, providing valuable information on partial charge, interatomic bonding and hydrogen bond (HB) formation. In general, our results show that the S-protein mutations for different variants foster an increased positive partial charge, alter the interatomic interactions, and disrupt the HB networks. We conclude by outlining a roadmap for future computational research of biomolecular virus-related systems.

60 APPLIED LIFE SCIENCES↗

DOE OSTI2019

Twist-2 pseudoscalar and vector meson distribution amplitudes in light-front quark model with exponential-type confining potential

We study the twist-2 distribution amplitudes (DAs) and the decay constants of pseudoscalar light ( π , K ) and heavy ( D , D s , B , B s ) mesons as well as the longitudinally and transversely polarized vector light ( ρ , K * ) and heavy ( D * , D s * , B * , B s * ) mesons in the light-front quark model with the Coulomb plus exponential-type confining potential V exp = a + b e α r in addition to the hyperfine interaction. We first compute the mass spectra of ground state pseudoscalar and vector light and heavy mesons and fix the model parameters necessary for the analysis, applying the variational principle with the trial wave function up to the first three lowest order harmonic oscillator (HO) wave functions $Φ(x,k_{\bot}) = Σ^{3}_{n=1} c_nΦ_{nS}$. We then obtain the numerical results for the corresponding decay constants of light and heavy mesons. We estimate the DAs, analyze their variation as a function of momentum fraction and compute the first six ξ -moments of the B and D mesons as well. We compare our results with the available experimental data as well as with the other theoretical model predictions.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗

DOE OSTI2023

Degeneracy in Intercalated Pb Phases under Buffer-Layer Graphene on SiC(0001) and Diffuse Moiré Spots in Surface Diffraction

First-principles density functional theory (DFT) is used to analyze the stability of Pb intercalated phases under buffer layer graphene on SiC(0001) as a function of the supercell size, Pb coverage, and degree of Pb ordering. By comparing the chemical potentials of such two-dimensional Pb structures, here we find that there is a family of structurally distinct thermodynamically preferred Pb subsurface configurations with minute stability differences. These differences are comparable to the thermal energies at about 450 °C, where the Pb intercalated phases are grown. High-resolution surface-diffraction experiments using Spot Profile Analysis Low-Energy Electron Diffraction (SPA-LEED) confirm this high degree of degeneracy of the Pb intercalated phases from broad, low-intensity moiré spots observed exclusively from intercalated Pb. The low intensity of the moiré spots implies the coexistence of structurally different subsurface Pb phases.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

DOE OSTI2023

High throughput calculations for a dataset of bilayer materials

Bilayer materials made of 2D monolayers are emerging as new systems creating diverse opportunities for basic research and applications in optoelectronics, thermoelectrics, and topological science among others. Herein, we present a computational bilayer materials dataset containing 760 structures with their structural, electronic, and transport properties. Different stacking patterns of each bilayer have been framed by analyzing their monolayer symmetries. Density functional theory calculations including van der Waals interactions are carried out for each stacking pattern to evaluate the corresponding ground states, which are correctly identified for experimentally synthesized transition metal dichalcogenides, graphene, boron nitride, and silicene. Binding energies and interlayer charge transfer are evaluated to analyze the interlayer coupling strength. Our dataset can be used for materials screening and data-assisted modeling for desired thermoelectric or optoelectronic applications.

36 MATERIALS SCIENCE↗

DOE OSTI2023

Investigating the vertical distribution of the disk as a function of radial action

As heating processes can broaden the distributions of radial actions and the vertical distributions of the Galactic disks, we investigate the vertical distribution of the Galactic disks as a function of radial action based on Apache Point Observatory Galactic Evolution Experiment (APOGEE) and Gaia data in order to deepen our understanding of the formation and heating history of the Galactic disks. The vertical distributions of the thin and thick Galactic disks defined in the chemical plane were fitted with a simple exponential function with a free parameter of scale height in different radial action ranges. Therefore, we were able to analyze the scale height as a function of radial action for different disk populations. We find that the distributions of radial action for both the thin and thick disks can be approximately described by pseudo-isothermal distributions, which give a statistical measurement for the temperature of the disk as indicated by the mean radial action of the star sample. Estimations of the scale heights in different radial action ranges for these pseudo-isothermal distributions of the disks seem to show fixed relationships between radial action J R and scale height h. We describe these relationships with a two-parameter function of h = √(J R /a)+b, where a and b are free parameters. When testing with a three-parameter function of h = α √(J R /a)+b, we find that this two-parameter function describes the thin disk well, but we note the function should be used with care for the thick disk. When comparing the best-fit relationships between the inner and outer disk for both of the thin and thick disks, we find that the relationships are nearly the same for the thin disks but are different for the thick disks. The inner thick disk shows a nearly flattened relationship, while the outer thick disk presents a gradually increasing relationship. This work highlights an alternative way to unveil the heating history of the disks by investigating the relationship between scale height and radial action, as these relationships encode the formation and heating history of the Galactic disks.

79 ASTRONOMY AND ASTROPHYSICS↗

DOE OSTI2024

Green's function methods for multiphysics simulations (Final Report)

Green's functions are important tools for analyzing mathematical properties of partial differential equations (PDEs), and for numerically solving PDEs, especially when equations for the same operator but with multiple right hand sides need to be solved simultaneously. This proposal aims at developing efficient and accurate numerical methods for computing Green's functions, which can be used to tackle a challenging question in multiphysics simulation of DOE-mission science problems: how to couple quantum physics with classical physics. The key mathematical difficulty is properly formulate a "boundary condition" for the region described by quantum physics, and conventional approaches often model such boundary conditions in an empirical way. The proposed Green's function methods use the Dirichlet-to-Neumann map to formulate a boundary condition that is non-empirical and can couple the quantum and classical regions in an in principle exact way. The key ingredient of the new methods is to construct the Dirichlet-to-Neumann map in an efficient, accurate and versatile manner. The new methods have provably low complexity and are ideally suited for massively parallel and emerging many-core computational systems.

97 MATHEMATICS AND COMPUTING↗

DOE OSTI2022

Topology of the $O(3)$ non-linear sigma model under the gradient flow

The $O(3)$ non-linear sigma model (NLSM) is a prototypical field theory for QCD and ferromagnetism, featuring topological qualities. Though the topological susceptibility should vanish in physical theories, lattice simulations of the NLSM find that the topological susceptibility diverges in the continuum limit. We introduce a $\theta$-term and analyze the topological charge as a function of $\theta$ under the gradient flow. Our results show that divergence persists in the presence of the flow, even at non-zero $\theta$.

Thomas, Stuart↗

DOE OSTI2024

Forensic Analysis of SOHO Router Binaries

Small Office/Home Office (SOHO) routers are used by millions of consumers across the United States, and are commensurately vulnerable. Forensic analysis of SOHO router firmware helps to understand and mitigate those vulnerabilities. This poster focused particularly on analysis of BusyBox executables, a software suite that provides several Unix utilities in a single file. Three main tools were used to analyze the binaries. BinWalk was used to extract the files, but also to build entropy graphs, extract Linux kernel images, and identify CPU architectures; WiiBin processed the binaries to find endianness, architecture, the percent compressed/encrypted, and compiler data; and @DisCo, a machine learning tool used to determine function similarity in disassembled binaries, analyzed similarities and determined versions of extracted BusyBox files from each router. These tools found that venders from all five routers utilized the same version of the BusyBox software across different firmware updates, demonstrating the importance of constant firmware scrutiny to protect against security vulnerabilities.

24 POWER TRANSMISSION AND DISTRIBUTION↗

DOE OSTI2021

Taxonomic and Functional Diversity of Aquatic Macroinvertebrate Assemblages and Water Quality in Rivers of the Dry Tropics of Costa Rica

One of Costa Rica’s driest areas is the province of Guanacaste, in the Pacific Northwest, with almost no rain during the dry season from November to April. Due to this marked seasonality, the area is covered by dry tropical deciduous forest, considered the most threatened and least known tropical ecosystem in this area. This study analyzes and characterizes the assemblages of aquatic macroinvertebrates in water bodies within the Tempisque basin. Biological water quality was measured using the BMWP′-CR index. Macroinvertebrate assemblages were analyzed using abundance, richness, and functional feeding group approaches (FFG). Partial least square (PLS) analyses were performed, and the relationships between environmental factors and macroinvertebrate assemblages are also discussed. Macroinvertebrate assemblages were dominated numerically by mayflies, caddisflies, flies, and beetles. The BWMP′-CR index showed varying biological water quality, ranging from “very bad” to “excellent,” depending on rainfall and site management. Results suggest that tropical Mesoamerican rivers contradict the “river continuum concept” because predators and scrapers displace shredders in numbers. On the other hand, the study area shows a notable high richness of the Coleoptera genera. The class Rhynchocoela (Nemertea) is reported for the first time in Central America. The results indicate that the dry forest river ecosystem shows staggering biodiversity despite the surrounding agricultural land use, probably because of their older origin concerning tropical rain forests in Central America.

54 ENVIRONMENTAL SCIENCES↗

DOE OSTI2019

Precision Local Positioning System

The primary goal of the project is to lay the groundwork for a new system design, meaning that at the end of this project’s effort, a traditional LLNL project could begin. For this goal to be met, the overarching needs of potential sponsors and stakeholders must be analyzed and understood, and a clear statement of work should be able to be drafted from the finding in this report. More specifically, the results from this project should immediately feed into the drafting of requirements, an implementation plan, and a budget plan for a future project. In order to accomplish this goal, the team set a broad framework for work to be completed. First, conduct current market research and select reference technologies to decompose. From the decompositions, analyze shortcomings, possible pain-points and form metrics and architectural decisions. Next, analyze the potential market area by interviewing/researching stakeholders and understanding their needs. As an additional project goal, attempt to capture as large a market area and scope as reasonably possible by incorporating more than the traditional LLNL sponsors. From the information gathered, study stakeholder salience and understand the relationships between stakeholders, mission areas, mission critical functions, and system metrics. Further analyze the relationships to focus on critical system aspects and to group stakeholders and mission together in order to reduce system complexity while maintaining wide marketability. Finally, begin brainstorming concepts from the established architectural decision and use the found metrics to create tradespaces to down select the most viable architectures. This document presents the team’s findings as it progressed through the project’s strategy.

42 ENGINEERING↗

DOE OSTI2024

Quantum Drude oscillators coupled with Coulomb potential as an efficient model for bonded and non-covalent interactions in atomic dimers

The quantum Drude oscillator (QDO) model has been widely used as an efficient surrogate to describe the electric response properties of matter as well as long-range interactions in molecules and materials. Most commonly, QDOs are coupled within the dipole approximation so that the Hamiltonian can be exactly diagonalized, which forms the basis for the many-body dispersion method [Phys. Rev. Lett. 108, 236402 (2012)]. The dipole coupling is efficient and allows us to study non-covalent many-body effects in systems with thousands of atoms. However, there are two limitations: (i) the need to regularize the interaction at short distances with empirical damping functions and (ii) the lack of multipolar effects in the coupling potential. In this work, we convincingly address both limitations of the dipole-coupled QDO model by presenting a numerically exact solution of the Coulomb-coupled QDO model by means of quantum Monte Carlo methods. We calculate the potential-energy surfaces of homogeneous QDO dimers, analyzing their properties as a function of the three tunable parameters: frequency, reduced mass, and charge. We study the coupled-QDO model behavior at short distances and show how to parameterize this model to enable an effective description of chemical bonds, such as the covalent bond in the H2 molecule.

Chemistry↗

DOE OSTI2019

Multidimensional sum-up rounding for integer programming in optimal experimental design

Here we present a numerical method for approximating the solution of convex integer programs stemming from optimal experimental design. The statistical setup consists of a Bayesian framework for linear inverse problems for which the direct relationship is described by a discretized integral equation. Specifically, we aim to find the optimal sensor placement from a set of candidate locations where data are collected with measurement error. The convex objective function is a measure of the uncertainty, described here by the trace or log-determinant of the posterior covariance matrix, for the discretized linear inverse problem solution. The resulting convex integer program is relaxed, producing a lower bound. An upper bound is obtained by extending the sum-up rounding approach to multiple dimensions. For this extension, we analyze its accuracy as a function of the discretization mesh size for a rectangular domain. We show asymptotic optimality of the integer solution defining the upper bound for different experimental design criteria (A- and D-optimal), by proving the convergence to zero of the gap between the upper and lower bounds as the mesh size goes to zero. The technique is illustrated on a two-dimensional gravity surveying problem for both A-optimal and D-optimal sensor placement where our designs yield better results compared with a thresholding rounding approach.

97 MATHEMATICS AND COMPUTING↗

DOE OSTI2023

Biochemical and genetic studies define the functions of methylthiotransferases in methanogenic and methanotrophic archaea

Methylthiotransferases (MTTases) are radical S-adenosylmethionine (SAM) enzymes that catalyze the addition of a methylthio (-SCH 3 ) group to an unreactive carbon center. These enzymes are responsible for the production of 2-methylthioadenosine (ms 2 A) derivatives found at position A37 of select tRNAs in all domains of life. Additionally, some bacteria contain the RimO MTTase that catalyzes the methylthiolation of the S12 ribosomal protein. Although the functions of MTTases in bacteria and eukaryotes have been established via detailed genetic and biochemical studies, MTTases from the archaeal domain of life are understudied and the substrate specificity determinants of MTTases remain unclear. Here, we report the in vitro enzymatic activities of an MTTase (C4B56_06395) from a thermophilic Ca. Methanophagales anaerobic methanotroph (ANME) as well as the MTTase from a hyperthermophilic methanogen – MJ0867 from Methanocaldococcus jannaschii. Both enzymes catalyze the methylthiolation of N 6 -threonylcarbamoyladenosine (t 6 A) and N 6 -hydroxynorvalylcarbamoyladenosine (hn 6 A) residues to produce 2-methylthio-N 6 -threonylcarbamoyladenosine (ms 2 t 6 A) and 2-methylthio-N 6 -hydroxynorvalylcarbamoyladenosine (ms 2 hn 6 A), respectively. To further assess the function of archaeal MTTases, we analyzed select tRNA modifications in a model methanogen – Methanosarcina acetivorans – and generated a deletion of the MTTase-encoding gene (MA1153). We found that M. acetivorans produces ms 2 hn 6 A in exponential phase of growth, but does not produce ms 2 t 6 A in detectable amounts. Upon deletion of MA1153, the ms 2 A modification was absent, thus confirming the function of MtaB-family MTTases in generating ms 2 hn 6 A modified nucleosides in select tRNAs.

59 BASIC BIOLOGICAL SCIENCES↗

DOE OSTI2019

Online monitoring of solutions within microfluidic chips: simultaneous Raman and UV-Vis absorption spectroscopies

Microfluidics is an appealing analytical tool in the global effort to close the nuclear fuel cycle. Using a microfluidic chip permits analysis of greatly reduced sample volumes compared to what is necessary for traditional analytical methods. There is a commensurate reduction in disposal volume and cost. Development of spectroscopic methods practicable on the microscale are necessary to take advantage of the microchip configuration. This study uses simultaneously applied UV-vis and micro-Raman spectroscopies adapted to function on the microscale to analyze in situ both the Nd3+ (UV-vis active) and HNO3 (Raman active) concentrations in the same sample. An adjustable translation platform was designed to hold the micro-Raman probe above and perpendicular to the chip face, and the UV-vis probe in the plane of the chip. These complimentary spectral techniques when processed through multivariate PLS (Partial Least Squares) models gave an accurate picture of the widely varying solution concentrations as a function of time for each solution component. Solution matrix effects can drastically alter analyte signatures as measured by both UV-vis absorbance and Raman spectroscopy. PLS methods successfully modeled these spectral changes and accurately measured concentrations of components of interest within the microfluidic chip.

on-line monitoring, microfluidics, Raman, UV-vis↗

DOE OSTI2019

ReaxFF molecular dynamics simulations on the structure and dynamics of electrolyte water systems at ambient temperature

Here, ReaxFF molecular dynamics simulations have been performed to study the effect of cations Li + , Na+ and K + and anion Cl - on the structural and dynamical properties of water, using the force field recently developed by Fedkin and co-workers. The structural relationship of ion and water has been analyzed from the radial distribution function and angular distribution. Comparisons of ReaxFF angle variation of ions and water within the first solvation shell were made and found to be in good agreement with literature. The disruption of hydrogen bond network of water by ions is elucidated by ion-water residence times, water-water hydrogen bond dynamics and reorientational dynamics. ReaxFF diffusion coefficient and residence times of electrolyte water system were compared with ab initio and non-reactive potentials to analyze the difference in dynamics. We gained insight into the ion interaction with water and how it can accelerate or decelerate water dynamics. ReaxFF outlines the formation and dissolution of metal hydroxides and metal chlorides over the course of simulation to explain the diffusion dynamics of water in salt solutions, allowing us to elucidate the impact of concentration on the self-diffusivity of water and ions in solutions, and to reveal that this effect always decreases the mobility and is not at all ion-specific. The obtained findings have opened new opportunities to extend the ReaxFF methodology towards systems involving electrolytes.

42 ENGINEERING↗

DOE OSTI2023

Orbital dependent complications for close vs well-separated electrons in diradicals

We investigate two limits in open-shell diradical systems: O3, in which the interesting orbitals are in close proximity to one another, and (C21H13)2, where there is a significant spatial separation between the two orbitals. In accord with earlier calculations, we find that standard density-functional approximations do not predict the open-shell character for the former case but uniformly predict the open-shell character for the latter case. We trace the qualitatively incorrect behavior in O3 predicted by these standard density functional approximations to self-interaction error and use the Fermi–Löwdin-orbital-self-interaction-corrected formalism to determine accurate triplet, closed-shell singlet, and open-shell broken-spin-symmetry electronic configurations. Analysis of the resulting many-electron overlap matrices allows us to unambiguously show that the broken-spin-symmetry configurations do not participate in the representation of the Ms = 0 triplet states and allows us to reliably extract the singlet–triplet splitting in O3 by analyzing the energy as a function of Fermi-orbital-descriptor permutations. The results of these analyses predict the percentage of open-shell character in O3, which agrees well with conventional wavefunction-based methods. While these techniques are expected to be required in cases near the Coulson–Fischer point, we find that they will be less necessary in diradical systems with well-separated electrons, such as (C21H13)2. Results based on energies from self-interaction-corrected generalized gradient, local density, and Hartree–Fock approximations and experimental results are in generally good agreement for O3. These results help form the basis for deriving extended Heisenberg-like Hamiltonians that are needed for descriptions of molecular magnets when there are competing low-energy electronic configurations.

Chemistry↗

DOE OSTI2023

Identifying the secondary electron cutoff in ultraviolet photoemission spectra for work function measurements of non-ideal surfaces

Abstract Absolute values of work functions can be determined in ultraviolet photoemission spectroscopy (UPS) by measuring the minimum kinetic energy of secondary electrons generated by a known photon energy. However, some samples can produce spectra that are difficult to interpret due to additional intensity below the true secondary electron cutoff. Disordered absorbates on elemental metals add small intensity below the onset for the transition metal surfaces studied, which can be attributed to energy losses after photoelectrons are generated. In contrast, spectra from WO 3−x films can produce multiple onsets with comparable intensity which do not fit this model. False onsets (in the context of work function measurements) can be minimized by optimizing experimental detection parameters including limiting analyzer acceptance angles and pass energy. True work functions can be identified by examining the onsets as the sample bias is varied.

75 CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND↗