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DOE OSTI2021

Milestone M6 Report: Reducing Excess Data Movement Part 1

This is the second in a sequence of three Hardware Evaluation milestones that provide insight into the following questions: What are the sources of excess data movement across all levels of the memory hierarchy, going out to the network fabric? What can be done at various levels of the hardware/software hierarchy to reduce excess data movement? How does reduced data movement track application performance? The results of this study can be used to suggest where the DOE supercomputing facilities, working with their hardware vendors, can optimize aspects of the system to reduce excess data movement. Quantitative analysis will also benefit systems software and applications to optimize caching and data layout strategies. Another potential avenue is to answer cost-benefit questions, such as those involving memory capacity versus latency and bandwidth. This milestone focuses on techniques to reduce data movement, quantitatively evaluates the efficacy of the techniques in accomplishing that goal, and measures how performance tracks data movement reduction. We study a small collection of benchmarks and proxy mini-apps that run on pre-exascale GPUs and on the Accelsim GPU simulator. Our approach has two thrusts: to measure advanced data movement reduction directives and techniques on the newest available GPUs, and to evaluate our benchmark set on simulated GPUs configured with architectural refinements to reduce data movement.

97 MATHEMATICS AND COMPUTING↗

NASA NTRS1976

An optimal structural design algorithm using optimality criteria

An algorithm for optimal design is given which incorporates several of the desirable features of both mathematical programming and optimality criteria, while avoiding some of the undesirable features. The algorithm proceeds by approaching the optimal solution through the solutions of an associated set of constrained optimal design problems. The solutions of the constrained problems are recognized at each stage through the application of optimality criteria based on energy concepts. Two examples are described in which the optimal member size and layout of a truss is predicted, given the joint locations and loads.

Taylor, J. E.↗

NASA NTRS2022

Embedding Climate Change in Urban Planning and Urban Design in New York City

Confronting the challenges of a rapidly urbanizing world threatened by climate change requires expanding the traditional influence and capabilities of urban planning and urban design, integrating climate science, natural systems and compact urban form to configure dynamic, desirable and healthy communities. Cost-effective planning and design measures that help mitigate emissions while bringing adaptive benefits should be prioritized. The chapter draws from the publication Climate Change and Cities (Cambridge University Press 2018) by the Urban Climate Change Research Network (UCCRN). The two-phase New York City case study by the Urban Design Climate Lab at the New York Institute of Technology and a team of international urban design climate experts illustrates how this emerging expertise can be replicated and implemented worldwide. Its focus on configuring people-centered public spaces that enhance energy efficiency and improve public health draws from four urban climate factors: improving efficiency of urban systems, both in energy and transportation; optimizing the form and layout of urban districts to enhance ventilation; promoting appropriate building materials with high reflectivity; and increasing green and blue urban infrastructure. The chapter highlights a set of tools and methods to measure success.

Resiliency↗

DOE OSTI2014

RADAR: Runtime Asymmetric Data-access Driven Scientific Data Replication

Efficient I/O on large-scale spatiotemporal scientific data requires scrutiny of both the logical layout of the data (e.g., row-major vs. column-major) and the physical layout (e.g., distribution on parallel filesystems). For increasingly complex datasets, hand optimization is a difficult matter prone to error and not scalable to the increasing heterogeneity of analysis workloads. Given these factors, we present a partial data replication system called RADAR. We capture datatype- and collective-aware I/O access patterns (indicating logical access) via MPI-IO tracing and use a combination of coarse-grained and fine-grained performance modeling to evaluate and select optimized physical data distributions for the task at hand. Unlike conventional methods, we store all replica data and metadata, along with the original untouched data, under a single file container using the object abstraction in parallel filesystems. Our system results in manyfold improvements in some commonly used subvolume decomposition access patterns.Moreover, the modeling approach can determine whether such optimizations should be undertaken in the first place.

access pattern↗

NASA NTRS1987

Time optimal paths and acceleration lines of robotic manipulators

The concept of acceleration lines and their correlation with time-optimal paths of robotic manipulators is presented. The acceleration lines represent the directions of maximum tip acceleration from a point in the manipulator work-space, starting at a zero velocity. These lines can suggest the number and shapes of time-optimal paths for a class of manipulators. It is shown that nonsingular time-optimal paths are tangent to one of the acceleration lines near the end-points. A procedure for obtaining near-optimal paths, utilizing the acceleration lines, is developed. These paths are obtained by connecting the end-points with B splines tangent to the acceleration lines. The near-minimum paths are shown to yield better traveling times than the straight-line path between the same end-points. The near-minimum paths can be used as initial conditions in existing optimization methods to speed-up convergence and computation time. This method can be used for online robot path planning and for interactive designs of robotic-cell layouts. Examples of time-optimal paths of a two-link manipulator, obtained by other optimization procedures and their acceleration lines, are shown.

Shiller, Zvi↗

NASA NTRS2015

Under-Track CFD-Based Shape Optimization for a Low-Boom Demonstrator Concept

The detailed outer mold line shaping of a Mach 1.6, demonstrator-sized low-boom concept is presented. Cruise trim is incorporated a priori as part of the shaping objective, using an equivalent-area-based approach. Design work is performed using a gradient-driven optimization framework that incorporates a three-dimensional, nonlinear flow solver, a parametric geometry modeler, and sensitivities derived using the adjoint method. The shaping effort is focused on reducing the under-track sonic boom level using an inverse design approach, while simultaneously satisfying the trim requirement. Conceptual-level geometric constraints are incorporated in the optimization process, including the internal layout of fuel tanks, landing gear, engine, and crew station. Details of the model parameterization and design process are documented for both flow-through and powered states, and the performance of these optimized vehicles presented in terms of inviscid L/D, trim state, pressures in the near-field and at the ground, and predicted sonic boom loudness.

Wintzer, Mathias↗

DOE OSTI2020

Liquid-Cooled Heat Sink Optimization for Thermal Imbalance Mitigation in Wide-Bandgap Power Modules

Power semiconductor die layout in substrates used in power modules is generally optimized for minimum electrical parasitics (e.g., stray inductance) by considering the minimum spacing between dies for thermal decoupling. The layout assumes sufficient heat spreading and transfer from dies to the cooling structure. For module designs using a direct substrate cooling method, the base plate is removed, leading to a steady-state thermal asymmetry in the power module due to insufficient heat spreading/transfer. This causes significant temperature differences among the devices. Such unintentional thermal asymmetries can lead to undesirable asymmetries in power conversion among semiconductor devices, which impact reliability. This article proposes a thermal imbalance mitigation method that uses evolutionary optimized liquid-cooled heat sinks to improve the thermal loading among devices.

Sahu, Raj↗

DOE OSTI2018

NUMA-Aware Thread Scheduling for Big Data Transfers over Terabits Network Infrastructure

The evergrowing trend of big data has led scientists to share and transfer the simulation and analytical data across the geodistributed research and computing facilities. However, the existing data transfer frameworks used for data sharing lack the capability to adopt the attributes of the underlying parallel file systems (PFS). LADS (Layout-Aware Data Scheduling) is an end-to-end data transfer tool optimized for terabit network using a layout-aware data scheduling via PFS. However, it does not consider the NUMA (Nonuniform Memory Access) architecture. In this paper, we propose a NUMA-aware thread and resource scheduling for optimized data transfer in terabit network. First, we propose distributed RMA buffers to reduce memory controller contention in CPU sockets and then schedule the threads based on CPU socket and NUMA nodes inside CPU socket to reduce memory access latency. We design and implement the proposed resource and thread scheduling in the existing LADS framework. Experimental results showed from 21.7% to 44% improvement with memory-level optimizations in the LADS framework as compared to the baseline without any optimization.

97 MATHEMATICS AND COMPUTING↗

NASA NTRS1971

Design, development, fabrication and delivery of register and multiplexer units

Two complementary MOS monolithic chip types were developed, which contain a register and multiplexer unit to be used in the central processing unit of a digital computer. The partition of the logic into a chip size consistent with the characteristics of the packages is discussed. The logic was implemented by specially configured circuitry designed to layout, as well as to optimize, performance by taking advantage of the properties of CMOS logic. Of several approaches considered for generating LSI CMOS arrays, the CMOS standard cell array design technique was selected. These design automation techniques were used to generate the chip layout, art work and working master plates, followed by the fabrication and testing of the two chip types. Sixty functional LSI arrays were delivered.

Feller, A.↗

DOE OSTI2023

High-performance strategies for the recent MRSF-TDDFT in GAMESS

Multiple ERI (Electron Repulsion Integral) tensor contractions (METC) with several matrices are ubiquitous in quantum chemistry. In response theories, the contraction operation, rather than ERI computations, can be the major bottleneck, as its computational demands are proportional to the multiplicatively combined contributions of the number of excited states and the kernel pre-factors. Here, this paper presents several high-performance strategies for METC. Optimal approaches involve either the data layout reformations of interim density and Fock matrices, the introduction of intermediate ERI quartet buffer, and loop-reordering optimization for a higher cache hit rate. The combined strategies remarkably improve the performance of the MRSF (mixed reference spin flip)-TDDFT (time-dependent density functional theory) by nearly 300%. The results of this study are not limited to the MRSF-TDDFT method and can be applied to other METC scenarios.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

NASA NTRS1980

Vehicle systems design optimization study

The optimum vehicle configuration and component locations are determined for an electric drive vehicle based on using the basic structure of a current production subcompact vehicle. The optimization of an electric vehicle layout requires a weight distribution in the range of 53/47 to 62/38 in order to assure dynamic handling characteristics comparable to current internal combustion engine vehicles. Necessary modification of the base vehicle can be accomplished without major modification of the structure or running gear. As long as batteries are as heavy and require as much space as they currently do, they must be divided into two packages, one at front under the hood and a second at the rear under the cargo area, in order to achieve the desired weight distribution. The weight distribution criteria requires the placement of batteries at the front of the vehicle even when the central tunnel is used for the location of some batteries. The optimum layout has a front motor and front wheel drive. This configuration provides the optimum vehicle dynamic handling characteristics and the maximum passenger and cargo space for a given size vehicle.

Gilmour, J. L.↗

NASA NTRS1993

Layout and cabling considerations for a large communications antenna array

Layout considerations for a large deep space communications antenna array are discussed. A fractal geometry for the antenna layout is described that provides optimal packing of antenna elements, efficient cable routing, and logical division of the array into identical sub-arrays.

Logan, R. T., Jr.↗

DOE OSTI2016

Communication Characterization and Optimization of Applications Using Topology-Aware Task Mapping on Large Supercomputers

On large supercomputers, the job scheduling systems may assign a non-contiguous node allocation for user applications depending on available resources. With parallel applications using MPI (Message Passing Interface), the default process ordering does not take into account the actual physical node layout available to the application. This contributes to non-locality in terms of physical network topology and impacts communication performance of the application. In order to mitigate such performance penalties, this work describes techniques to identify suitable task mapping that takes the layout of the allocated nodes as well as the application's communication behavior into account. During the first phase of this research, we instrumented and collected performance data to characterize communication behavior of critical US DOE (United States - Department of Energy) applications using an augmented version of the mpiP tool. Subsequently, we developed several reordering methods (spectral bisection, neighbor join tree etc.) to combine node layout and application communication data for optimized task placement. We developed a tool called mpiAproxy to facilitate detailed evaluation of the various reordering algorithms without requiring full application executions. This work presents a comprehensive performance evaluation (14,000 experiments) of the various task mapping techniques in lowering communication costs on Titan, the leadership class supercomputer at Oak Ridge National Laboratory.

97 MATHEMATICS AND COMPUTING↗

DOE OSTI2016

Communication Characterization and Optimization of Applications Using Topology-Aware Task Mapping on Large Supercomputers

Sreepathi, Sarat↗

DOE OSTI2017

Exploring performance and energy tradeoffs for irregular applications: A case study on the Tilera many-core architecture

High performance, parallel applications with irregular data accesses are becoming a critical workload class for modern systems. In particular, the execution of such workloads on emerging many-core systems is expected to be a significant component of applications in data mining, machine learning, scientific computing and graph analytics. However, power and energy constraints limit the capabilities of individual cores, memory hierarchy and on-chip interconnect of such systems, thus leading to architectural and software trade-os that must be understood in the context of the intended application’s behavior. Irregular applications are notoriously hard to optimize given their data-dependent access patterns, lack of structured locality and complex data structures and code patterns. We have ported two irregular applications, graph community detection using the Louvain method (Grappolo) and high-performance conjugate gradient (HPCCG), to the Tilera many-core system and have conducted a detailed study of platform-independent and platform-specific optimizations that improve their performance as well as reduce their overall energy consumption. To conduct this study, we employ an auto-tuning based approach that explores the optimization design space along three dimensions - memory layout schemes, GCC compiler flag choices and OpenMP loop scheduling options. We leverage MIT’s OpenTuner auto-tuning framework to explore and recommend energy optimal choices for different combinations of parameters. We then conduct an in-depth architectural characterization to understand the memory behavior of the selected workloads. Finally, we perform a correlation study to demonstrate the interplay between the hardware behavior and application characteristics. Using auto-tuning, we demonstrate whole-node energy savings and performance improvements of up to 49:6% and 60% relative to a baseline instantiation, and up to 31% and 45:4% relative to manually optimized variants.

auto tuning↗

DOE OSTI2019

Design and Characterization of High Thermal Conductivity Pipes from Roll-to- Roll Processed Hybrid Copper-Polymer Strips for Waste Heat Recovery

Metal based heat exchangers targeting low temperature (<150°C) waste heat recovery (WHR) face high maintenance and material costs [1] that result in long payback periods (>1 year). Low-cost polymer pipes suffer from poor thermal conductivity (~0.2 W/m.K), and thus a low overall heat transfer coefficient. Previous reports demonstrated thermal conductivity enhancement in polymers through systematic molecular alignment [2, 3, 4], or by metal micro-particle inclusions [5]. However, these approaches suffer from scalability issues for WHR heat exchangers in terms of cost [1, 3], and thermomechanical considerations [6, 7]. In this work, we propose hybrid metal-polymer strips that are strategically designed to enhance thermal conductivity by cladding copper around polymer strips. The polymer strips with copper-clad edges are wound helically to form the pipes for a heat exchanger. Through numerical simulations, we optimize the copper-polymer strip layouts to achieve high wall thermal conductivity (k > 1 W/m.K) and also have low volume fraction of copper (<70%) for the composite pipes. In copper-polymer composite heat exchangers, the bottlenecks for heat transfer are the thermal interfacial resistances of copper-copper and copper-polymer joints. We experimentally measured interfacial resistances to be ~1x10 -5 K.m 2 /W and ~4x10 -5 K.m 2 /W for copper-copper and copper-polymer joints, respectively. Using the measured interfacial resistances, we further optimized the design of the hybrid pipes to find high thermal conductivity (> 1 W/m.K) designs. We predict up to ~20 % enhancement in overall heat transfer relative to an all polymer (k = 0.2 W/m.K) heat exchanger system. Using a cohesive zone modelling (CZM) for predicting delamination at the weld joints, we find that our hybrid pipes can have operating internal pressures > 200 psi. The optimized designs of hybrid metal-polymer pipes provide a scalable and cost- effective means for harvesting waste heat from low temperature sources. Thekdi, A., and Nimbalkar, S. Oak Ridge National Lab (2014). Shen, Sheng, et al. Nature nanotechnology 5.4 (2010). Xu, Yanfei, et al. Science advances 4.3 (2018). Smith et al. ACS nano, 9(2), (2015). Sofian, N.M., et al., Journal of Thermoplastic Composite Materials (2001). Aymonier et al. Chemistry of Materials, 15(25), (2003). Tavman, I.H., Journal of Applied Polymer Science, 62(12), (1996).

C Rajagopal, Manjunath↗

NASA NTRS2018

Distributed-Flap Layout Trade Study on a Highly Flexible Common Research Model

The results of a layout trade study of a full-span, trailing-edge flap system for the NASACommon Research Model (CRM) are presented. Previously developed analysis and design tools areused to determine the potential performance benefits of several flap layouts on a highlyflexible version of the aircraft wing. The wing is first re-twisted for optimal aerodynamicperformance at the design cruise condition while addressing aeroelastic effects. Several flaplayouts are then installed on the new baseline wing. The deflection of each segment on allflap layouts is then optimized for aerodynamic performance at an overspeed flight conditionto ascertain the effectiveness of each flap system. The results indicate that employing two-segmentflaps greatly improves overspeed performance as compared to using no or justsingle-segment flaps. The study also showed that additional segments offer only incrementalimprovements in performance. The results also show that using only four spanwise flaps canproduce meaningful performance gains. Overall, the trade study results suggest a simpledistributed flap system (four spanwise flaps with two segments each) can reduce the drag ofthe Common Research Model by 13 counts at a Mach number that is 3.5 percent higher than thedesign cruise point.

Common Research Model (CRM)↗

DOE OSTI2025

Web-Based Tools for Data-Informed Remedy Optimization: Software Theory and User Guide

This report documents the development and application of two web-based decision-support tools for pump-and-treat (P&T) groundwater remediation systems: PTOLEMY (Pump-and-Treat Optimized Location Evaluation to Maximize Yields) and OPTIMA (Optimization for Pump-and-Treat Implementation, Management, & Assessment). These tools enhance remedy design and management by leveraging advanced computational methods – specifically deep learning and multi-objective optimization – within a user-friendly platform. By integrating data-driven models with established hydrogeological knowledge, PTOLEMY and OPTIMA enable more efficient evaluation of well placement and operational strategies, helping site managers balance multiple remediation objectives under complex conditions. Both tools are implemented as modules within the SOCRATES (Suite Of Comprehensive Rapid Analysis Tools for Environmental Sites) web platform, which provides data access, visualization, and analytics to support remedy optimization across sites in the U.S. Department of Energy Office of Environmental Management complex. PTOLEMY is a rapid screening module designed to identify promising locations for new extraction wells. It employs a multi-channel three-dimensional convolutional neural network (MC3D-CNN) trained on high-fidelity simulation data to predict the relative performance (in terms of contaminant mass recovery) of potential well sites. Through an interactive web interface, PTOLEMY visualizes the probability of high performance across a site, highlighting areas where an extraction well is likely to yield above-threshold contaminant removal over a multi-year period. PTOLEMY’s map-based displays and exportable results support transparent communication of screening analyses. By focusing attention on the most favorable candidate locations, the tool augments traditional engineering judgment and physics-based modeling, providing a data informed basis for subsequent detailed evaluations. OPTIMA is a multi objective optimization module designed to find wellfield layouts and operating schedules that meet various cleanup goals. It quickly evaluates thousands of candidate setups – combinations of well locations, timing, and rates – and returns a small set of best trade-off options for comparison. At its core, OPTIMA uses a U-Net-based surrogate model – a deep-learning emulator of a groundwater flow and transport simulator – to dramatically accelerate scenario evaluations. Coupling this fast surrogate with the NSGA-II (Non-dominated Sorting Genetic Algorithm II) evolutionary algorithm, OPTIMA explores a wide decision space of well locations and schedules to identify Pareto-optimal solutions that trade off key objectives (e.g., minimizing cleanup time, maximizing contaminant mass removal, and minimizing plume extent). The tool outputs a family of optimal configurations and visualizes their trade-offs (Pareto frontiers of cleanup metrics and maps of optimized well placements). Site managers can use these results to understand the range of viable strategies and to select candidate designs for more detailed verification. OPTIMA is currently under active development and not yet fully released; this guide provides early documentation to support planning and gather user feedback.

54 ENVIRONMENTAL SCIENCES↗