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Jackson County Community Solar Modeling Results [Slides]

Jackson County, via the U.S. Department of Energy's Communities LEAP (Local Energy Action Program) requested support on the topic of Community Solar in their area. NREL completed a technical and financial modeling exercise to determine the potential for developing community solar in the region. The analysis performed determined that the current policy and economic environment, in large part due to Illinois's Solar For All program, is advantageous to the deployment and growth of community solar in Illinois. Across all 6 scenarios modeled, including current minimum and maximum financial incentives, the economics yielded positive net present values for both the project owner and its subscribers. The analysis shown in this presentation is only one of the first steps in deploying community solar and suggests Jackson County should pursue next steps. Such actions could include refining project economics, partnering with local utilities, policy makers, and developers to identify potential projects and outreach opportunities, and educating and engaging community members.

14 SOLAR ENERGY↗

Neutrino masses and magnetic moments of electron and muon in the Zee Model

We explore parameter space in the Zee Model to resolve the long-standing tension of the electron and muon anomalous magnetic moment (AMM). The model comprises a second Higgs doublet and a charged singlet at electroweak scale and generates Majorana neutrino masses at one-loop level; the neutral partner of the SU(2) L doublet contributes to the AMM of electron and muon via one loop and two-loop corrections. We propose two minimal flavor structures that can explain these anomalies while fitting the neutrino oscillation data. We find that the neutral Higgs resides in the mass range of roughly 10–300 GeV or 1–30 GeV, depending on the flavor structures. The model is consistent with constraints from colliders, electroweak precision data, and lepton flavor violation. To be comprehensive, we examine the constraints from the electric dipole moment (EDM) and find a region of parameter space that gives a sizable contribution to muon EDM while simultaneously giving corrections to muon AMM. In addition to the light scalar, the two charged scalars with masses as low as 100 GeV can induce nonstandard neutrino interactions ε ee as large as 8%, potentially hinting at new physics. We also investigate the projected capability of future lepton colliders to probe the currently allowed parameter space consistent with both electron and muon AMMs via direct searches in the ℓ + ℓ – → ℓ + ℓ – (H→ℓ + ℓ – )channel.

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗

Assessing the Current State of U.S. Energy Equity Regulation and Legislation (2024 Update) [Slides]

Lawrence Berkeley National Laboratory (LBNL) partnered with E9 Insight (E9) to update the 2022 database of executive, legislative, and regulatory actions focusing on energy equity and directed at electricity and natural gas utilities. The resulting database contains 307 energy equity actions, which consist of documents (e.g., bills, dockets, and executive orders) identified through keyword searches associated with energy equity. Based on our review, almost half of states (32 + DC) were taking some sort of action on energy equity (i.e., executive order, PUC activity, agency plan, or executive bill). In the report, we explored temporal trends to track state actions over time across regions, outcomes, equity tenets, and objectives. We also explored what drivers led to what outcomes. Drivers were organized into legislative, regulatory, executive, and stakeholder-driven.

29 ENERGY PLANNING, POLICY, AND ECONOMY↗

Wyoming CarbonSAFE Phase III: Site Characterization and Permitting Commercial-Scale Carbon Storage Complex Feasibility Study at Dry Fork Station, Wyoming

This report presents the findings of the technical and non-technical site characterization and permitting activities (“Phase III”) conducted under the Wyoming CarbonSAFE: Accelerating CCUS Commercialization and Deployment at Dry Fork Power Station (DFS) and the Wyoming Integrated Test Center project (“Wyoming CarbonSAFE”). Wyoming CarbonSAFE is part of the U.S. Department of Energy’s (DOE) National Energy Technology Laboratory (NETL) Carbon Storage Assurance Facility Enterprise (“CarbonSAFE”) Initiative. The results of Phase III demonstrate that the Wyoming CarbonSAFE project - referred to as the Northern Powder River Basin Carbon Sequestration Hub (NPRB-CSH) - meets the technical, regulatory, and commercial feasibility requirements necessary to advance toward commercial development and construction. The activities completed under this project Phase make the NPRB-CSH one of the region’s most commercially ready carbon storage sites. Completion of this Phase included the finalization of all site surface and subsurface characterization activities, completion and testing of two Class VI standard wells, 10 draft Class VI permits-to construct to address the future needs of a storage complex, finalized NEPA assessments, transportation and capture FEED studies, and a full commercialization strategy with economic modeling, operation and site closure strategies. The NPRB-CSH meets all requirements to progress to a CarbonSAFE Phase IV program or advance to full commercial operations under the development of a business partner.

01 COAL, LIGNITE, AND PEAT↗

Combined search for electroweak production of winos, binos, higgsinos, and sleptons in proton-proton collisions at s = 13 TeV

A combination of the results of several searches for the electroweak production of the supersymmetric partners of standard model bosons, and of charged leptons, is presented. All searches use proton-proton collision data at s = 13 TeV recorded with the CMS detector at the LHC in 2016–2018. The analyzed data correspond to an integrated luminosity of up to 137 fb − 1 . The results are interpreted in terms of simplified models of supersymmetry. Two new interpretations are added with this combination: a model spectrum with the bino as the lightest supersymmetric particle together with mass-degenerate Higgsinos decaying to the bino and a standard model boson, and the compressed-spectrum region of a previously studied model of slepton pair production. Improved analysis techniques are employed to optimize sensitivity for the compressed spectra in the wino and slepton pair production models. The results are consistent with expectations from the standard model. The combination provides a more comprehensive coverage of the model parameter space than the individual searches, extending the exclusion by up to 125 GeV, and also targets some of the intermediate gaps in the mass coverage. © 2024 CERN, for the CMS Collaboration 2024 CERN

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗

RDPP: Accelerating Diversity in DOE Climate Science and Resilience Research (Final Report)

The scope of the project was set out to accelerate the inclusion of diversity into the Department of Energy (DOE) Earth and Environmental Systems Sciences Division (EESSD) relevant climate science and resilience research to inclusively advance solutions. The Project Objectives were to usher in equitable use-inspired climate-related research with underrepresented Minorities of which this project helped fund 7 HU graduate students work with the DOE (three of which will graduate in Spring 2025). The two key aims underpinning that core goal were AIM1: developing partnerships (18 organized engaged, see partners list) and AIM2: Developing capabilities (3 visits to DOE facilities, 5 DOE partners visits to HU, increased visiting faculty participation in BNL-DOE lab, secured 5 grants together totaling 1.2 million in funds for HU). The project objectives were highly successful as they were designed to ambitiously pull together DOE lab researchers with the long-standing and successful transdisciplinary climate science research programs of the PI and local DC groups. The major outcomes of this RDPP program will be in the new fundamentally inclusive partnerships with DOE and HU tasked to understand the urban-rural impacts due to climate change in the US, Eastern South Atlantic (ESA) Region, related to energy issues driven by heat stress and the water cycle. Overall, this project contributes to the DOE and science community vision for catalyze connections for project-ready underrepresented minorities (URMs) at a prominent HBCU to DOE projects supported by the Biological and Environmental research (BER) Program; particularly, the Earth and Environmental Systems Sciences Division (EESSD).

54 ENVIRONMENTAL SCIENCES↗

2022 Component Innovation Awardee: Pecos Wind Power

Distributed wind energy systems supply electricity for nearby homes and businesses, often in remote and rural regions. Systems capable of capturing energy in areas with low wind speeds make it possible to deploy these clean energy systems in many geographic locations. Pecos Wind Power's 85-kilowatt (kW) horizontal-axis PW85 wind turbine shows potential to reduce the levelized cost of energy by approximately 55% when compared to typical small wind systems while achieving utility-scale capacity factors of more than 40% in areas with lower wind speeds. To maximize cost competitiveness, the Pecos Wind Power turbine needs a blade optimized for low wind speeds. Through its 2022 Competitiveness Improvement Project (CIP) award, Pecos Wind Power and partner Wetzel Wind Energy Services will model, optimize, fabricate, and validate a 14.5-meter wind turbine blade made specifically for these applications. Three prior CIP awards supported Pecos Wind Power's initial development of the PW85 turbine.

CIP↗

Integrated Hydrogen Energy Storage System (IHESS) for Power Generation (Final Report)

GTI Energy partnered with Praxair Inc., a subsidiary of Linde PLC (Praxair), the Center for Electromechanics at the University of Texas at Austin (CEM), Entergy Corporation (Entergy), Quanta Services (Quanta) and Mitsubishi Heavy Industries (MHI) to perform a feasibility study that determines the economic and technical feasibility of low-carbon hydrogen energy storage integrated with a site-specific fossil fuel asset to decarbonize electricity production using the Integrated Hydrogen Energy Storage System (IHESS). The proposed IHESS concept is novel, as it sought to leverage the existing natural gas infrastructure, hydrogen production and pipelines, existing underground hydrogen storage system and power plants in the Gulf Coast region to reduce carbon emissions and generate lowcarbon electricity. This study has shown that IHESS has a promising commercial outlook as the concept leverages existing natural gas infrastructure assets and hydrogen production and storage that are unique to the Texas gulf coast region. A key hurdle with hydrogen supply and transportation has been capital investment. By storing hydrogen in underground storage and delivering it as a fuel source during peak demand using the existing infrastructure minimizes the capital investment. Regional petrochemical producers who are actively seeking opportunities to reduce costs and lower emissions should find the IHESS concept very appealing.

03 NATURAL GAS↗

Ameloblastin binding to biomimetic models of cell membranes – A continuum of intrinsic disorder

A 37-residue amino acid sequence corresponding to the segment encoded by exon-5 of murine ameloblastin (Ambn), AB2 (Y67-Q103), has been implicated with membrane association, ameloblastin self-assembly, and amelogenin-binding. Here, our aim was to characterize, at the residue level, the structural behavior of AB2 bound to chemical mimics of biological membranes using NMR spectroscopy. To better define the structure of AB2 using NMR-based methods, recombinant 13 C- and 15 N-labelled AB2 (*AB2) was prepared and data collected free in solution and with deuterated dodecylphosphocholine (dPC) micelles, deuterated bicelles, and both small and large unilamellar vesicles. Amide chemical shift and intensity perturbations observed in 1 H- 15 N HSQC spectra of *AB2 in the presence of bicelles and dPC micelles suggest that a region of *AB2, S6-E36 (murine Ambn S68 – E98), associates with the membrane biomimetics. A CSI-3 analysis of the NMR chemical shift assignments for *AB2 free in solution and bound to dPC micelles indicated the peptide remains disordered except for the adoption of a short, 12-residue α-helix, F10-G21 (murine Ambn F72-G83). In dPC micelles, the NOE NMR data was void of patterns characteristic of long-lived helical structure indicating this helix was transient in nature. A continuum of intrinsic disorder in the membrane-bound state may be responsible for ameloblastin’s ability to dynamically interact with multiple partners at the same site during amelogenesis.

59 BASIC BIOLOGICAL SCIENCES↗

Resilient water infrastructure partnerships in institutionally complex systems face challenging supply and financial risk tradeoffs

Abstract As regions around the world invest billions in new infrastructure to overcome increasing water scarcity, better guidance is needed to facilitate cooperative planning and investment in institutionally complex and interconnected water supply systems. This work combines detailed water resource system ensemble modeling with multiobjective intelligent search to explore infrastructure investment partnership design in the context of ongoing canal rehabilitation and groundwater banking in California. Here we demonstrate that severe tradeoffs can emerge between conflicting goals related to water supply deliveries, partnership size, and the underlying financial risks associated with cooperative infrastructure investments. We show how hydroclimatic variability and institutional complexity can create significant uncertainty in realized water supply benefits and heterogeneity in partners’ financial risks that threaten infrastructure investment partnership viability. We demonstrate how multiobjective intelligent search can design partnerships with substantially higher water supply benefits and a fraction of the financial risk compared to status quo planning processes. This work has important implications globally for efforts to use cooperative infrastructure investments to enhance the climate resilience and financial stability of water supply systems.

Science & Technology - Other Topics↗

INGENIOUS Thermal Conductivity Measurement Source Categorization

Thermal conductivity (TC) data taken for different wells at a specified drill depth. This is an abridged version of the complete SMU heat flow database, downloaded from the SMU node of the NGDS at the beginning of INGENIOUS (approximately April 2021), and filtered to the INGENIOUS study area. This National Geothermal Data System (NGDS) project aggregates geothermal data collected and curated by the SMU Geothermal Laboratory and its partner organizations. All columns in this database are the same as the SMU database, except for 2 additions associated with this project. Repeated columns are for data correlation purposes. Column descriptions and data types are the same as previous iterations of the SMU database. The new values that are the addition are two new columns developed as part of the INGENIOUS project: INGENIOUS TC Value | INGENIOUS notes INGENIOUS notes are individual notes that were written for specific data points during the analysis process. There are not always notes associated with each input value. INGENIOUS TC Value includes 4 values: 1. Assumed Measured These are values that are assumed to be measured thermal conductivity values, either within a specific well or within the same study region. Many of these have either a published reference, a reported standard deviation, or a unique thermal conductivity value. 2. Data release - assumed measured These are values in the SMU database that are from proprietary data that were added to the SMU database and are labeled as data release for their reference. These values were searched for in person at the SMU Geothermal Laboratory as well as virtual examination of data available on the NGDS. For many of these, there are reported thermal conductivity values associated with the heat flow data in the database, but no specific table or reference to measurements in the original data release files. 3. Known measured These are values that have a reported measurement, either as an original file in the SMU data files on the NGDS or a reported table in a publication. In the rare circumstances, Maria Richards or David Blackwell confirmed measurement. Confirmation of measurement would be written in the INGENIOUS notes column. 4. Unmeasured Unmeasured values are those that are known to be unmeasured, either estimated from another report or no information given. In the SMU database, there are wells that have a heat flow but no thermal conductivity. These are categorized as unmeasured. There are also heat flow values that are stated to have estimated or generalized average thermal conductivity values for the region and rock type. Because these are known to be unmeasured, they are categorized as such. 5. Blank Blank values are either A quality or X quality. These quality values are stated in the INGENIOUS notes. These values were not going to change associated with the heat flow analysis, so these were not examined.

15 GEOTHERMAL ENERGY↗

Structure of pre-miR-31 reveals an active role in Dicer–TRBP complex processing

As an essential posttranscriptional regulator of gene expression, microRNA (miRNA) levels must be strictly maintained. The biogenesis of many miRNAs is mediated by trans-acting protein partners through a variety of mechanisms, including remodeling of the RNA structure. miR-31 functions as an oncogene in numerous cancers, and interestingly, its biogenesis is not known to be regulated by protein-binding partners. Therefore, the intrinsic structural properties of the precursor element of miR-31 (pre-miR-31) can provide a mechanism by which its biogenesis is regulated. We determined the solution structure of pre-miR-31 to investigate the role of distinct structural elements in regulating processing by the Dicer–TRBP complex. We found that the presence or absence of mismatches within the helical stem does not strongly influence Dicer–TRBP processing of the pre-miRNAs. However, both the apical loop size and structure at the Dicing site are key elements for discrimination by the Dicer–TRBP complex. Interestingly, our NMR-derived structure reveals the presence of a triplet of base pairs that link the Dicer cleavage site and the apical loop. Mutational analysis in this region suggests that the stability of the junction region strongly influences processing by the Dicer–TRBP complex. Our results enrich our understanding of the active role that RNA structure plays in regulating miRNA biogenesis, which has direct implications for the control of gene expression.

59 BASIC BIOLOGICAL SCIENCES↗

Potential Availability of Alternative Fuel to Supply Maritime Activities in Pacific Northwest Ports

The international shipping sector represented 3% of global greenhouse gas emissions in 2023 (Office of Energy Efficiency & Renewable Energy 2024). International shipping has been classified as a difficult-to-decarbonize industry (IRENA 2024). In an effort to drive decarbonization, the U.S. Department of Energy has partnered with Mission Innovation to co-lead the Zero-Emission Shipping Mission, which launched in 2021(Office of Energy Efficiency & Renewable Energy 2021). In addition, the U.S. Department of State partnered with Norway to launch the Green Shipping Challenge in 2022 (Office of the Spokesperson 2022b). As part of the ZESM and Green Shipping Challenge, the United States is collaborating with the Republic of Korea (ROK) to develop a green shipping corridor (U.S. Mission Korea 2023). The United States and ROK have conducted a pre-feasibility study as the first step in developing a green shipping corridor between the countries. The ports included in the study are Seattle, Tacoma, and Everette in the U.S. Pacific Northwest (PNW) and Busan, Ulsan, and Masan in ROK. The National Renewable Energy Laboratory's role in the study was to analyze the availability and technical potential of alternative marine fuels in proximity to U.S. PNW ports. The findings show most of the existing alternative fuel capacity within the region is from renewable diesel, biodiesel, and sustainable aviation fuel facilities. The largest growth in fuel capacity in the region by 2030 is projected to be in renewable diesel and hydrogen. The overall technical readiness of non-drop-in alternative fuel production and conversion technologies is more developed than alternative-fueled ships and associated fueling infrastructure. However, much of the fuel capacity in the region is comprised of drop-in fuels, making it technically possible to use existing infrastructure for transporting and bunkering to the existing fleet. Data to inform regional alternative fuel quantity estimations were collected from an extensive review of databases, reports, announcements, and other publicly available resources. A maturity index and sector competition factor were applied to announced fuel projects to determine the quantity of alternative fuel available to the marine sector in the region by 2030. Demand data were collected from fuel bunkering logs covering the PNW seaports (State of Washington 2021). Both supply and demand data were converted to very-low sulfur fuel oil gallon equivalents (VLSFO-GE) for better comparison. Qualitative data were gathered through interviews with stakeholders, project developers, and industry experts. Total alternative fuel capacity available to the marine sector in the region is estimated to be 824 million VLSFO-GE per year by 2030. This is sufficient to cover the requirements of a green shipping corridor between the United States and ROK. The findings from this report are being used to inform detailed feasibility studies for several U.S. PNW -ROK green shipping corridors. Updates from the U.S. PNW - ROK feasibility studies will continue to be published on Mission Innovation's green corridor tracking website (Zero Emission Shipping Mission, n.d.). In addition, this report has helped to inform further work on shipping decarbonization in the U.S. PNW, including the Pacific Northwest to Alaska Green Corridor focused on cruise vessels.

32 ENERGY CONSERVATION, CONSUMPTION, AND UTILIZATI↗

Equity Considerations in Siting Consolidated Interim Storage Facilities for Commercial Spent Nuclear Fuel

Questions of equity and fairness are often raised by representatives from State, Tribal and local governments and members of the public when resolving conflicts over siting of nuclear facilities. However, the two terms are not synonymous: equity can be quantified while fairness is much more subjective. The Department of Energy's (DOE) December 2021 Request for Information sought input on how to site federal facilities for the temporary, consolidated storage of spent nuclear fuel (SNF) using a consent-based approach. It is anticipated that just such questions about equity and fairness associated with the potential emergence of more than one host site may be raised by the twelve groups of university, nonprofit and private sector partners (Consortia) working to support community engagement, inclusively involve stakeholders, build relationships, and develop innovative forms of mutual learning and public capacity to participate in the consent-based siting process for a federal consolidated interim storage facility during the current Planning & Capacity Building stage of the consent-based siting process. In terms of DOE's Integrated Waste Management System (IWMS), sociopolitical equity concepts are a factor in all aspects of IWMS development and operations and will be particularly applicable should two or more host sites become a possibility, either by the emergence of multiple volunteer hosts or by pursuit as a IWMS program strategy. This paper summarizes recent analyses that explore how four equity metrics - number of states, division of the projected SNF total by the year 2083, current population and land area - might be perceived by host communities, states and regions if two, three or four sites for hosting federal consolidated interim storage facilities were to be contemporaneously realized. Existing institutional arrangements, including Nuclear Regulatory Commission regions, Federal Energy Regulatory Commission regions and Low-Level Radioactive Waste Disposal Compacts, were selected to create hypothetically merged two, three and four-region scenarios to calculate how the four metrics balance out. Projected SNF burden was prioritized with regional contiguity of the consolidated regions a requirement for a functional scenario. The intent was not to promote or suggest any construct as a program objective; the configurations are geopolitical abstractions only to explore potential perceptions of equity. Understanding the possible issues of equity that could arise may benefit program efforts toward achieving a cooperative federalism wherein both the federal and multiple State governments share the goal of manifesting more than one federal consolidated interim storage facility. The main finding is that it is not possible to optimize for all four metrics simultaneously. The analyses demonstrate that trying to create a sense of equity by backfitting a solution to a random population and land distribution will always contain a degree of artificiality.

12 MANAGEMENT OF RADIOACTIVE AND NON-RADIOACTIVE W↗

Elucidating the corrosion mechanism of Ni-based superalloys in the presence of uranium-containing chloride molten salt

The United States Department of Energy (DOE) is committed to the advancement of nuclear reactor technology through initiatives such as the Advanced Reactor Development Program (ARDP), in an effort to diversify the United States energy portfolio towards more sustainable energy options. The ARDP includes demonstration by industry partners of molten chloride fast reactors (MCFRs). Construction of MCFRs requires qualified nuclear structural materials. Unfortunately, there are no current materials that are fully qualified by the Nuclear Regulatory Commission for the construction of molten salt reactors, including MCFRs. Adapting current structural material qualifications requires expansion of our current knowledgebase on the property-performance relationships regarding corrosion performance. In this investigation, we assess microstructural changes in a Ni-based superalloy after exposure to a UCl3¬-containing chloride salt eutectic mixture through a correlated multi-modal approach combining several advanced characterization techniques, including scanning electron microscopy/focused ion beam (SEM/FIB) and transmission electron microscopy (TEM). SEM/FIB analysis will illustrate changes in elemental composition, microstructure, and isotopic information acquired from energy x-ray dispersive spectroscopy (EDS), electron backscatter diffraction (EBSD), and secondary ion mass spectroscopy (SIMS), respectively. This information will then aid in identifying localized regions to elucidate the corrosion mechanism with TEM through a combination of electron diffraction, electron energy loss spectroscopy (EELS), and additional EDS. The findings from this investigation will further expand our assessment of the corrosion performance of structural materials in molten salt chloride systems, aiding to developing fully qualified materials for construction of MCFRs.

36 MATERIALS SCIENCE↗

Collaborative Research: Louis Stokes Regional Center of Excellence: Louis Stokes Midwest Regional Center of Excellence (LSMRCE) for Broadening Participation in STEM

The Louis Stokes Midwest Regional Center of Excellence (LSMRCE) for Broadening Participation in STEM, a partnership of Chicago State University (CSU), aimed to increase the number of underrepresented minority (URM) students graduating with science, technology, engineering, and math (STEM) degrees and matriculating into graduate STEM programs. As a member institution of the LSMRCE, Fermi Research Alliance, LLC, (Fermilab) looked to support its continued mission of increasing URM student participation in its Summer Internship in Science and Technology (SIST) internship program. The program provided URMs with access to research skills development, mentoring and professionalization activities via paid, summer research internships at Fermilab. Students received instruction and mentoring while gaining exposure to a global laboratory workforce and community with diverse academic and professional expertise. In addition, students established professional relationships and networked with senior researchers, early career scientists, technical professionals, post-docs and other undergraduate interns to help forge collaboration, innovation and mentoring opportunities at Fermilab and LSMRCE partner institutions

99 GENERAL AND MISCELLANEOUS↗

Low-Income Energy Affordability Data - LEAD Tool - 2022 Update

The Low-Income Energy Affordability Data (LEAD) Tool was created by the Better Building's Clean Energy for Low Income Communities Accelerator (CELICA) to help state and local partners understand housing and energy characteristics for the low- and moderate-income (LMI) communities they serve. The LEAD Tool provides estimated LMI household energy data based on income, energy expenditures, fuel type, housing type, and geography, which stakeholders can use to make data-driven decisions when planning for their energy goals. From the LEAD Tool website, users can also create and download customized heat-maps and charts for various geographies, housing, energy characteristics, and population demographics and educational attainment. Datasets are available for 50 states plus Puerto Rico and Washington D.C., along with their cities, counties, and census tracts, as well as tribal areas. The file below, "01. Description of Files," provides a list of all files included in this dataset. A description of the abbreviations and units used in the LEAD Tool data can be found in the file below titled "02. Data Dictionary 2022". A list of geographic regions used in the LEAD Tool can be found in files 04-11. The Low-Income Energy Affordability Data comes primarily from the 2022 U.S. Census American Community Survey 5-Year Public Use Microdata Samples and is calibrated to 2022 U.S. Energy Information Administration electric utility (Survey Form-861) and natural gas utility (Survey Form-176) data. The methodology for the LEAD Tool can viewed below (3. Methodology Document). For more information, and to access the interactive LEAD Tool platform, please visit the "10. LEAD Tool Platform" resource link below. For more information on the Better Building's Clean Energy for Low Income Communities Accelerator (CELICA), please visit the "11. CELICA Website" resource below.

AMI↗

Structural basis of DNA binding by the WhiB-like transcription factor WhiB3 in Mycobacterium tuberculosis

Mycobacterium tuberculosis (Mtb) WhiB3 is an iron–sulfur cluster-containing transcription factor belonging to a subclass of the WhiB-Like (Wbl) family that is widely distributed in the phylum Actinobacteria. WhiB3 plays a crucial role in the survival and pathogenesis of Mtb. It binds to the conserved region 4 of the principal sigma factor (σ A 4 ) in the RNA polymerase holoenzyme to regulate gene expression like other known Wbl proteins in Mtb. However, the structural basis of how WhiB3 coordinates with σ A 4 to bind DNA and regulate transcription is unclear. Here we determined crystal structures of the WhiB3:σ A 4 complex without and with DNA at 1.5 Å and 2.45 Å, respectively, to elucidate how WhiB3 interacts with DNA to regulate gene expression. These structures reveal that the WhiB3:σ A 4 complex shares a molecular interface similar to other structurally characterized Wbl proteins and also possesses a subclass-specific Arg-rich DNA-binding motif. We demonstrate that this newly defined Arg-rich motif is required for WhiB3 binding to DNA in vitro and transcriptional regulation in Mycobacterium smegmatis. Together, our study provides empirical evidence of how WhiB3 regulates gene expression in Mtb by partnering with σ A 4 and engaging with DNA via the subclass-specific structural motif, distinct from the modes of DNA interaction by WhiB1 and WhiB7.

59 BASIC BIOLOGICAL SCIENCES↗