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Search indexed NASA NTRS and DOE OSTI research on propulsion, heat transfer, battery materials and energy systems. Follow report and document links to the original sources.

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At least 181 records · Page 10
All sourcesNASA NTRSDOE OSTI
DOE OSTI2017

Benchmarking and Evaluating Unified Memory for OpenMP GPU Offloading

Here, the latest OpenMP standard offers automatic device offloading capabilities which facilitate GPU programming. Despite this, there remain many challenges. One of these is the unified memory feature introduced in recent GPUs. GPUs in current and future HPC systems have enhanced support for unified memory space. In such systems, CPU and GPU can access each other's memory transparently, that is, the data movement is managed automatically by the underlying system software and hardware. Memory over subscription is also possible in these systems. However, there is a significant lack of knowledge about how this mechanism will perform, and how programmers should use it. We have modified several benchmarks codes, in the Rodinia benchmark suite, to study the behavior of OpenMP accelerator extensions and have used them to explore the impact of unified memory in an OpenMP context. We moreover modified the open source LLVM compiler to allow OpenMP programs to exploit unified memory. The results of our evaluation reveal that, while the performance of unified memory is comparable with that of normal GPU offloading for benchmarks with little data reuse, it suffers from significant overhead when GPU memory is over subcribed for benchmarks with large amount of data reuse. Based on these results, we provide several guidelines for programmers to achieve better performance with unified memory.

97 MATHEMATICS AND COMPUTING↗
DOE OSTI2013

Quick Start User’s Guide for the PATH/AWARE Decision Support System

The Prioritization Analysis Tool for All-Hazards/Analyzer for Wide Area Restoration Effectiveness (PATH/AWARE) software system, developed by Sandia National Laboratories, is a comprehensive decision support tool designed to analyze situational awareness, as well as response and recovery actions, following a wide-area release of chemical, biological or radiological materials. The system provides capability to prioritize critical infrastructure assets and services for restoration. It also provides a capability to assess resource needs (e.g., number of sampling teams, laboratory capacity, decontamination units, etc.), timelines for consequence management activities, and costs. PATH/AWARE is a very comprehensive tool set with a considerable amount of database information managed through a Microsoft SQL (Structured Query Language) database engine, a Geographical Information System (GIS) engine that provides comprehensive mapping capabilities, as well as comprehensive decision logic to carry out the functional aspects of the tool set. This document covers the basic installation and operation of the PATH/AWARE tool in order to give the user enough information to start using the tool. A companion user's manual is under development with greater specificity of the PATH/AWARE functionality.

Knowlton, Robert G.↗
DOE OSTI2018

Recurrent Neural Network Attention Mechanisms for Interpretable System Log Anomaly Detection

Deep learning has recently demonstrated state-of-the art performance on key tasks related to the maintenance of computer systems, such as intrusion detection, denial of service attack detection, hardware and software system failures, and malware detection. In these contexts, model interpretability is vital for administrator and analyst to trust and act on the automated analysis of machine learning models. Deep learning methods have been criticized as black box oracles which allow limited insight into decision factors. In this work we seek to "bridge the gap'' between the impressive performance of deep learning models and the need for interpretable model introspection. To this end we present recurrent neural network (RNN) language models augmented with attention for anomaly detection in system logs. Our methods are generally applicable to any computer system and logging source. By incorporating attention variants into our RNN language models we create opportunities for model introspection and analysis without sacrificing state-of-the art performance. We demonstrate model performance and illustrate model interpretability on an intrusion detection task using the Los Alamos National Laboratory (LANL) cyber security dataset, reporting upward of 0.99 area under the receiver operator characteristic curve despite being trained only on a single day's worth of data.

Anomaly detection, Attention, Recurrent Neural Net↗
DOE OSTI2019

Scaling the Summit: Deploying the World's Fastest Supercomputer

Summit, the latest flagship supercomputer deployed at Oak Ridge Leadership Computing Facility (OLCF), became the number one system in the Top500 list in June 2018 and remains in the top spot in the most recent edition of the list. An extensive acceptance test plan was developed to evaluate the unique features introduced in the Summit architecture and system software stack. The acceptance test also includes tests to ensure that the system is reliable, stable, and performant.

Melesse Vergara, Veronica↗
DOE OSTI2020

Advanced Tri-lab Software Environment (ATSE)

The Advanced Tri-lab Software Environment (ATSE) is an effort to build an open, modular, extensible, community-engaged, and vendor-adaptable software ecosystem that enables the prototyping of new technologies for improving the ASC computing environment. The initial target for ATSE is to accelerate the maturity of the Arm ecosystem for supporting ASC computing and the high-performance computing community more broadly. ATSE provides an integrated and optimized software stack that includes: 1) Application development environment and libraries including compilers, math libraries, tools, MPI, and OpenMP, 2) Low-level system software including optimized Linux, network stack, file systems, containers, and virtual machines, 3) Job scheduling and management including workload manager, application launcher, and user tools, and 4) System administration and management tools supporting booting, monitoring, and operating system image management. SAND2020-12377 M Sandia National Laboratories is a multimission laboratory managed and operated by National Technology & Engineering Solutions of Sandia, LLC, a wholly owned subsidiary of Honeywell International Inc., for the U.S. Department of Energy’s National Nuclear Security Administration under contract DE-NA0003525.

Younge, Andrew J.↗
DOE OSTI2012

Enabling event tracing at leadership-class scale through I/O forwarding middleware. In: HPDC '12 Proceedings of the 21st international symposium on High-Performance Parallel and Distributed Computing

Event tracing is an important tool for understanding the performance of parallel applications. As concurrency increases in leadership-class computing systems, the quantity of performance log data can overload the parallel file system, perturbing the application being observed. In this work we present a solution for event tracing at leadership scales. We enhance the I/O forwarding system software to aggregate and reorganize log data prior to writing to the storage system, significantly reducing the burden on the underlying file system for this type of traffic. Furthermore, we augment the I/O forwarding system with a write buffering capability to limit the impact of artificial perturbations from log data accesses on traced applications. To validate the approach, we modify the Vampir tracing toolset to take advantage of this new capability and show that the approach increases the maximum traced application size by a factor of 5x to more than 200,000 processes.

Ilsche, Thomas↗
DOE OSTI2012

Enabling Event Tracing at Leadership-Class Scale through I/O Forwarding Middleware

Event tracing is an important tool for understanding the performance of parallel applications. As concurrency increases in leadership-class computing systems, the quantity of performance log data can overload the parallel file system, perturbing the application being observed. In this work we present a solution for event tracing at leadership scales. We enhance the I/O forwarding system software to aggregate and reorganize log data prior to writing to the storage system, significantly reducing the burden on the underlying file system for this type of traffic. Furthermore, we augment the I/O forwarding system with a write buffering capability to limit the impact of artificial perturbations from log data accesses on traced applications. To validate the approach, we modify the Vampir tracing tool to take advantage of this new capability and show that the approach increases the maximum traced application size by a factor of 5x to more than 200,000 processors.

Ilsche, Thomas↗
DOE OSTI2014

A Runtime Verification Framework for Control System Simulation

n a standard workflow for the validation of a control system, the control system is implemented as an extension to a simulator. Such simulators are complex software systems, and engineers may unknowingly violate constraints a simulator places on extensions. As such, errors may be introduced in the implementation of either the control system or the simulator leading to invalid simulation results. This paper presents a novel runtime verification approach for verifying control system implementations within simulators. The major contribution of the approach is the two-tier specification process. In the first tier, engineers model constraints using a domain-specific language tailored to modeling a controller’s response to changes in its input. The language is high-level and effectively hides the implementation details of the simulator, allowing engineers to specify design-level constraints independent of low-level simulator interfaces. In the second tier, simulator developers provide mapping rules for mapping design-level constraints to the implementation of the simulator. Using the rules, an automated tool transforms the design-level specifications into simulator-specific runtime verification specifications and generates monitoring code which is injected into the implementation of the simulator. During simulation, these monitors observe the input and output variables of the control system and report changes to the verifier. The verifier checks whether these changes follow the constraints of the control system. We describe application of this approach to the verification of the constraints of an HVAC control system implemented with the power grid simulator GridLAB-D.

control system↗
DOE OSTI2018

APS Data Management System

As the capabilities of modern X-ray detectors and acquisition technologies increase, so do the data rates and volumes produced at synchrotron beamlines. This brings into focus a number of challenges related to managing data at such facilities, including data transfer, near real-time data processing, automated processing pipelines, data storage, handling metadata and remote user access to data. The Advanced Photon Source Data Management System software is designed to help beamlines deal with these issues. Finally, this paper presents the system architecture and describes its components and functionality; the system's current usage is discussed, examples of its use have been provided and future development plans are outlined.

97 MATHEMATICS AND COMPUTING↗
DOE OSTI2016

Application Characterization at Scale: Lessons learned from developing a distributed Open Community Runtime system for High Performance Computing

Since 2012, the U.S. Department of Energy’s X-Stack program has been developing solutions including runtime systems, programming models, languages, compilers, and tools for the Exascale system software to address crucial performance and power requirements. Fine grain programming models and runtime systems show a great potential to efficiently utilize the underlying hardware. Thus, they are essential to many X-Stack efforts. An abundant amount of small tasks can better utilize the vast parallelism available on current and future machines. Moreover, finer tasks can recover faster and adapt better, due to a decrease in state and control. Nevertheless, current applications have been written to exploit old paradigms (such as Communicating Sequential Processor and Bulk Synchronous Parallel processing). To fully utilize the advantages of these new systems, applications need to be adapted to these new paradigms. As part of the applications’ porting process, in-depth characterization studies, focused on both application characteristics and runtime features, need to take place to fully understand the application performance bottlenecks and how to resolve them. This paper presents a characterization study for a novel high performance runtime system, called the Open Community Runtime, using key HPC kernels as its vehicle. This study has the following contributions: one of the first high performance, fine grain, distributed memory runtime system implementing the OCR standard (version 0.99a); and a characterization study of key HPC kernels in terms of runtime primitives running on both intra and inter node environments. Running on a general purpose cluster, we have found up to 1635x relative speed-up for a parallel tiled Cholesky Kernels on 128 nodes with 16 cores each and a 1864x relative speed-up for a parallel tiled Smith-Waterman kernel on 128 nodes with 30 cores.

Application characterization↗
DOE OSTI2013

Coordinated Fault Tolerance for High-Performance Computing

Our work to meet our goal of end-to-end fault tolerance has focused on two areas: (1) improving fault tolerance in various software currently available and widely used throughout the HEC domain and (2) using fault information exchange and coordination to achieve holistic, systemwide fault tolerance and understanding how to design and implement interfaces for integrating fault tolerance features for multiple layers of the software stack—from the application, math libraries, and programming language runtime to other common system software such as jobs schedulers, resource managers, and monitoring tools.

97 MATHEMATICS AND COMPUTING↗
DOE OSTI2015

Ultra-secure RF Tags for Safeguards and Security - SBIR Phase II Final Report

This is the Final Report for the DOE Phase II SBIR project “Ultra-secure RF Tags for Safeguards and Security.” The topics covered herein include technical progress made, progress against the planned milestones and deliverables, project outcomes (results, collaborations, intellectual property, etc.), and a discussion on future expectations of deployment and impacts of the results of this work. In brief, all planned work for the project was successfully completed, on or ahead of schedule and on budget. The major accomplishment was the successful development of a very advanced passive ultra-secure RFID tag system with combined security features unmatched by any commercially available ones. These tags have high-level dynamic encrypted authentication, a novel tamper-proofing mechanism, system software including graphical user interfaces and networking, and integration with a fiber-optic seal mechanism. This is all accomplished passively (with no battery) by incorporating sophisticated hardware in the tag which harvests the energy from the RFID readers that are interrogating the tag. Based on initial feedback (and deployments) at DOE’s Lawrence Livermore National Laboratory (LLNL), it is anticipated these tags and their offspring will meet DOE and international community needs for highly secure RFID systems. Beyond the accomplishment of those original objectives for the ultra-secure RF tags, major new spin-off thrusts from the original work were identified and successfully pursued with the cognizance of the DOE sponsor office. In particular, new classes of less sophisticated RFID tags were developed whose lineage derives from the core R&D thrusts of this SBIR. These RF “tag variants” have some, but not necessarily all, of the advanced characteristics described above and can therefore be less expensive and meet far wider markets. With customer pull from the DOE and its national laboratories, new RFID tags and systems (including custom readers and software) for government needs in asset management and tracking were developed. These were tested at a national laboratory and other government facilities, and resulted in immediate procurement actions by the government and deployment of these new systems. Thus, commercialization of the results of this Phase II DOE SBIR was already underway before the end of the SBIR itself. More importantly, operations involving asset management at selected DoE and government sites are already being impacted favorably and could have much broader impacts in the near future.

42 ENGINEERING↗
DOE OSTI2012

Exascale Operating Systems and Runtime Software Report

Here U.S. Department of Energy (DOE) workshops and reports have identified four key exascale challenges: dramatically improving power efficiency; improving resilience in the presence of increasing faults; enabling efficient data movement across deepening memory hierarchies and new storage technologies; and managing dramatically increased parallelism, especially at the node level. Software solutions that address these challenges must also improve programmability, expanding the community of computational scientists who can use leadership-class platforms. To address these challenges, DOE must develop new techniques, novel designs, and advanced software architectures for next-generation exascale software infrastructure. In this report, we discuss challenges and approaches to exascale operating system and runtime (OS/R) software. The Exascale Operating Systems and Runtime (OS/R) Software Technical Council canvassed hardware architects, application programmers, parallel tool developers, DOE high-performance computing (HPC) facilities, and the vendors that sell and support integrated platforms. After considering the collective requirements of these constituents and examining the future research challenges and current software gaps, the council recommends that DOE invest in targeted advanced computer science research and in specific coordinating activities to enable the effective and successful development of anticipated exascale systems.

97 MATHEMATICS AND COMPUTING↗
DOE OSTI2020

Data from: "Soil moisture mediates alpine life form and community productivity responses to warming"

This dataset contains values that were used to support conclusions drawn in the publication “Soil moisture mediates alpine life form and community productivity responses to warming”, originally published in 2016 by Winkler et al. All data were collected in the alpine site of the Alpine Treeline Warming Experiment (ATWE), located on Niwot Ridge, in the Front Range of the Colorado Rocky Mountains, USA. The file types in this archive include comma-separated-values (.csv) files, and two types of geospatial files: .kml and shapefiles (.shp). The csv files can be opened by R, Microsoft Excel, or any simple text editor software. The geospatial files can be opened by Google Earth/Google Maps, and the ESRI shapefiles can be opened by geographic information systems softwares that can read shapefiles, including ESRI’s ArcGIS Desktop suite, and QGIS.Climate warming is expected to alter primary production and community composition in alpine systems around the globe. Whether production will increase in response to warming in the absence of additional precipitation remains underexplored. We experimentally warmed an alpine plant community on Niwot Ridge, Colorado to test whether warming increases or decreases productivity of multiple plant life form groups and the entire plant community. We also provided supplemental water to a subset of plots to alleviate potential drying effects of warming. We predicted alpine community above-ground productivity would increase in response to warming only when combined with supplemental water to limit soil drying. We also predicted plant life form groups would vary in their responses and would like buffer changes in community productivity.

54 ENVIRONMENTAL SCIENCES↗
DOE OSTI2017

Application Modernization at LLNL and the Sierra Center of Excellence

We repport that in 2014, Lawrence Livermore National Laboratory began acquisition of Sierra, a pre-exascale system from IBM and Nvidia. It marks a significant shift in direction for LLNL by introducing the concept of heterogeneous computing via GPUs. LLNL’s mission requires application teams to prepare for this paradigm shift. Thus, the Sierra procurement required a proposed Center of Excellence that would align the expertise of the chosen vendors with laboratory personnel that represent the application developers, system software, and tool providers in a concentrated effort to prepare the laboratory’s codes in advance of the system transitioning to production in 2018. Finally, this article presents LLNL’s overall application strategy, with a focus on how LLNL is collaborating with IBM and Nvidia to ensure a successful transition of its mission-oriented applications into the exascale era.

97 MATHEMATICS AND COMPUTING↗
DOE OSTI2021

Enabling Scalable and Extensible Memory-mapped Datastores in Userspace

Exascale workloads are expected to incorporate data-intensive processing in close coordination with traditional physics simulations. These emerging scientific, data-analytics and machine learning applications need to access a wide variety of datastores in flat files and structured databases. Programmer productivity is greatly enhanced by mapping datastores into the application process's virtual memory space to provide a unified “in-memory” interface. Currently, memory mapping is provided by system software primarily designed for generality and reliability. However, scalability at high concurrency is a formidable challenge on exascale systems. Also, there is a need for extensibility to support new datastores potentially requiring HPC data transfer services. In this article, we present UMap , a scalable and extensible userspace service for memory-mapping datastores. Furthermore, through decoupled queue management, concurrency aware adaptation, and dynamic load balancing, UMap enables application performance to scale even at high concurrency. We evaluate UMap in data-intensive applications, including sorting, graph traversal, database operations, and metagenomic analytics. Our results show that UMap as a userspace service outperforms an optimized kernel-based service across a wide range of intra-node concurrency by 1.22-1.9 × . We performed two case studies to demonstrate UMap 's extensibility. First, a new datastore residing in remote memory is incorporated into UMap as an application-specific plugin. Second, we present a persistent memory allocator Metall built atop UMap for unified storage/memory.

97 MATHEMATICS AND COMPUTING↗
DOE OSTI2024

IoT-Based Comfort Control and Fault Diagnostics System for Energy-Efficient Homes

This project studies an Internet of Things (IoT)-based comfort control and fault diagnostics system (referred as iComfort in this report) for energy-efficient homes. The system delivers an occupant-comfort-oriented thermal environment adaptive to fault scenarios and achieves HVAC energy savings in a cost-effective and straightforward way. This smart iComfort home system consists of the following key features. 1) Cost-effectiveness and scalability of the entire hardware and software system: The system includes low-cost temperature, humidity, and airflow sensors, and a Raspberry Pi-based local hub that interfaces with the cloud and IoT-enabled devices. The cost is low, not only for sensors, but also the costs associated with sensor installation, system setup and commissioning, data communication and storage, and data analytics (e.g., the development of automated fault detection and diagnosis (AFDD), as well as adaptive control strategies that are both computationally efficient and practical to implement). 2) Energy performance and user satisfaction: The system delivers user satisfaction and energy savings. This includes a) ease of use, b) optimal occupant thermal comfort, and c) accurate system feedback (e.g., low false alarm of AFDD strategies). 3) Favorable demonstrated prototype performance: The prototype tested at the Pacific Northwest National Laboratory (PNNL) Lab Homes demonstrates the accuracy of fault detections and diagnoses and shows thermal comfort improvement and energy savings through adaptive and optimal HVAC operations.

32 ENERGY CONSERVATION, CONSUMPTION, AND UTILIZATI↗
DOE OSTI2025

Code Coverage Status of the ARC Code RCT

The Argonne Reactor Code (ARC) software system supports users in their fast reactor design goals by providing neutronic, thermal-hydraulic, and structural analysis capabilities. REBUS plays a pivotal role in the ARC system as the primary fuel cycle analysis capability for fast reactor problems. Over its 60 year history, ARC software usage with REBUS has been applied to numerous fast and thermal spectrum reactor analysis projects with good to excellent comparison against experiments. The RCT code is a later addition and uses the REBUS restart files to define its input. The RCT code was built to provide pin depletion details on EBR-II models and thus many features of RCT were specifically tailored to the needs of EBR-II models. Additional approximations were invoked which are likely only valid for the EBR-II reactor and the particular fuel management that was done for it. The purpose of the present work is to identify a set of test problems for RCT and assess the code coverage for those test problems. The goal is to document what parts of the existing RCT code are touched by the set of test problems and which are not. Because no detailed verification work has been done on RCT, the existing regression testing suite was chosen for the code coverage assessment. The code coverage analysis of RCT was performed with the Code Coverage Tool of the Intel Fortran compiler which requires modifications to the compilation of RCT. The detailed coverage tables are given for each part of RCT. As will be discussed and shown, some parts of the RCT capability that are known to be used by the EBR-II analysis work are not tested by the regression testing suite. These aspects should be resolved before major source code changes are taken for the RCT software. Because REBUS and DIF3D are not subroutines of RCT, the coverage changes in both of those codes is not altered by RCT. The same is true for all of the modules of DIF3D that are used by RCT such as SYSLIB and SEGLIB.

22 GENERAL STUDIES OF NUCLEAR REACTORS↗