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DOE OSTI2019

The ray-tracing code Zgoubi - latest developments

The reader is referred to the ICFA-BD-NL No.43, and to a more recent status article in NIMA, regarding the technical details of the Zgoubi tracking engine and its accuracy, which make it "near-symplectic" - sufficiently so to model millions of turns in large hadron colliders, - and its potential for pushing particles in complex accelerator structures and accelerator optical elements or their field maps. Extended documentation can be found in the regular FFA workshops as well as in the SourceForge code development site where in particular many examples of beam lines, FFAs and other ring simulations are maintained. There is also a comprehensive user's guide. Further documentation, including an attempt to demonstrate 6D simulation in all possible types of particle accelerators, can be found in the "Computer Laboratory" Stony Brook University "PHY689" semester series.

43 PARTICLE ACCELERATORS↗

DOE OSTI2024

Polaris Studio

SF-24-040 Polaris-studio is the Python entry point/front end for using the Polaris transportation simulator. The package contains the code used to create new models from open and user-provided data, an extensive range of convenience tools for data preparation and result analysis and the ability of designing, launching and tracking studies combining multiple individual Polaris simulations from a Python terminal. The Polaris Studio software contains several modules for accomplishing the above tasks, including the PolarisLib - the Polaris object model, Polaris Manager - code for setting up and running Polaris studies, QPOLARIS - an add-on for the QGis software to allow model files to be created and edited, PolarisVis - a juptyer-based postprocessing library, and Polaris Tools - a useful collection of supplemental tools for interacting with Polaris files.

Auld, Joshua↗

DOE OSTI2024

DualSPHysics-INL

Funded by the DOE's Bioenergy Technology Office through the Feedstock-Conversion Interface Consortium, INL researchers developed this code to model biomass freestock flow in various handling equipment, such as hoppers and augers. Built on top of an existing open-source code DualSPHysics (https://dual.sphysics.org/) , the enrichment includes modification of the mass conservation equation that switching tracking density to void ratio, adding a hypoplastic constitutive law to better capture the flow physics of this type of material and implementing a novel boundary condition that can handle the dynamic contact between material and equipment. All implementation were realized via Nvidia CUDA, so GPU accelaration can be leveraged to signifiantly speed up the computational process.

Jin, Wencheng [Idaho National Laboratory (INL), Id↗

DOE OSTI2025

Measurement and Modeling of Electron Temperature in Laboratory Photoionized Plasmas Relevant to Astrophysics

The electron temperature of photoionized plasmas characterizes the thermalization of photoelectrons, impacts the charge-state distribution, emissivity, and opacity through atomic recombination processes, and is needed to perform detailed comparisons with theory predictions. We discuss temperature measurements in laboratory photoionized plasmas and a comparison with model calculations done with several theory approximations and codes. These include a radiation-hydrodynamics simulation and two nonequilibrium heating and ionization models that tracked the evolution of the internal energy of the electrons. Furthermore, for the same physics model and X-ray flux time history, calculations were performed assuming steady-state or time-dependent conditions. The time history of steady-state results correlates with that of the X-ray flux, while that of the time-dependent cases does not, and it is qualitatively and quantitatively different from the steady-state case. Steady-state results significantly overestimated temperature measurements, while time-dependent results produced better approximations, which suggests the importance of transient effects in the experiment and also the need for time-resolved measurements.

Laboratory astrophysics↗

DOE OSTI2020

Examination of Global Midlatitude Atmospheric River Lifecycles Using an Object-Oriented Methodology

Tracking atmospheric rivers (ARs) across their lifecycles is a field of recent interest with a multitude of emerging methodologies. The CONNected-objECT (CONNECT) algorithm is adapted for the tracking of global midlatitude AR lifecycles and associated precipitation by implementing a seeded region growing segmentation algorithm, creating the AR-CONNECT algorithm. To facilitate the permissiveness of the methodology, AR-CONNECT is without hard-coded geometric criteria yet is still shown to extract synoptic-scale elongated objects >99.99% of the time. One of the consequences of the methodology is the ability to occasionally track atmospheric water vapor anomalies before evolving into AR geometries, effectively tracking AR genesis further back than other studies. With the aid of subdaily satellite-derived rain data, we investigate the climatology, trends, and patterns of AR lifecycles from 1983–2016 and compare with other AR tracking studies. We find that AR frequency, genesis, and terminus locations are in generally good agreement with other AR tracking methodologies, though with key differences, and that AR frequencies in each hemisphere are determined by the number of AR hotspots. Furthermore, we uncover evidence that certain AR characteristics, such as frequency, areal extent, and duration, show evidence of increasing trends. Midlatitude precipitation uncovered by AR-CONNECT shows contributions up to 50% over land and 65% over the ocean. Trend analysis of AR precipitation shows an increase in precipitation associated with ARs propagated by the Southern Jet Stream and ARs that traverse over the Sahara Desert, among others, but is determined not to be a driver of changes in global precipitation.

54 ENVIRONMENTAL SCIENCES↗

DOE OSTI2024

Towards the Development of Molten Salt Reactor Multiphysics Modeling Capabilities: Depletion, Thermochemistry, Reactor Dynamics, and Species Tracking

This report documents the simulation and modeling work performed under the Nuclear Energy Advanced Modeling and Simulation (NEAMS) program, utilizing the tools and codes developed under the program. The focus in this Fiscal Year (FY) is on the depletion, thermochemistry, reactor dynamics, and species transport in MSRs. The fission products travelling in the entire primary loop is unique in MSRs. There are many physical/chemical mechanisms that can significantly affect the fission products concentration in the fuel salt, e.g., diffusion into gas bubbles, diffusion in the core moderators, deposition on the surface of structures/pipes, etc. The fission product concentration in the fuel salt can potentially affect the neutronics, system dynamics, chemical potentials, etc., so accurately predicting the fission products distribution in the primary loop is important. Under the main objective, different activities are pursued to assess the NEAMS tools applicability for a variety of areas on species transport, including the depletion analyses using Griffin (fission product source), the redox potential assessment at different depletion points, the assessment of xenon transport effect on the neutronics and reactor dynamics, a survey of correlations for calculating the mass transfer coefficient of different fission products, etc.

22 GENERAL STUDIES OF NUCLEAR REACTORS↗

DOE OSTI2025

ExaCA v2.0: A versatile, scalable, and performance portable cellular automata application for additive manufacturing solidification

The previously established ExaCA software for performance portable alloy grain structure simulation has been updated to better represent the solidification behavior during complex alloy processing conditions, such as those encountered during metal additive manufacturing (AM), and for improved performance and scalability. Here, an extension to the time–temperature history input data format and the core ExaCA algorithm to include an arbitrary number of melting and solidification events yielded improved prediction of texture for various melt pool geometries, expanding the range of AM-relevant conditions that can be accurately simulated. Improved heat transport process simulation coupling, including the creation of large raster datasets from single track time–temperature history data and in-memory coupling with the new, performance portable finite difference code Finch, were also demonstrated in example studies on the effect of multilayer AM microstructure predictions on hatch spacing and cell size, respectively. Additional new features are detailed and demonstrated, including the ability to perform simulations using various interfacial response function forms, execute simulations on state-of-the-art hardware, improved usability through post-processing versatility, and improved strong and weak scaling performance. The performance, physics, and versatility improvements demonstrated here will further enable large-scale studies on AM process–microstructure relationships that were not previously possible. Furthermore, the usability improvements and ability to run coupled AM process–microstructure simulations using the Finch-ExaCA workflow will facilitate broader use of this open-source software by the computational materials community.

36 MATERIALS SCIENCE↗

DOE OSTI2019

MAUS: the MICE analysis user software

The Muon Ionization Cooling Experiment (MICE) collaboration has developed the MICE Analysis User Software (MAUS) to simulate and analyze experimental data. It serves as the primary codebase for the experiment, providing for offline batch simulation and reconstruction as well as online data quality checks. The software provides both traditional particle-physics functionalities such as track reconstruction and particle identification, and accelerator physics functions, such as calculating transfer matrices and emittances. The code design is object orientated, but has a top-level structure based on the Map-Reduce model. This allows for parallelization to support live data reconstruction during data-taking operations. MAUS allows users to develop in either Python or C++ and provides APIs for both. Various software engineering practices from industry are also used to ensure correct and maintainable code, including style, unit and integration tests, continuous integration and load testing, code reviews, and distributed version control. The software framework and the simulation and reconstruction capabilities are described.

47 OTHER INSTRUMENTATION↗

DOE OSTI2024

ScholarGuard

The ScholarGuard framework aims to address the gap in archiving and preservation efforts for scholarly artifacts beyond traditional research papers, such as software source code, datasets, presentation slides, workflows, protocols, videos, and more. It introduces a prototype system designed to automatically track researchers' outputs across various scholarly productivity portals on the open web, including platforms like GitHub, Slideshare, Figshare, and Wikipedia. The system detects the availability of new scholarly artifacts and applies modern web archiving technology to create a durable archival record, including high-level metadata for each artifact. This metadata is displayed within the system, linking both to the live version and the archived version of the resource, ensuring long-term accessibility and preservation of diverse research outputs. The software serves as a critical tool for preserving the broader spectrum of scholarly contributions, facilitating visibility, searchability, and long-term access to research artifacts beyond the traditional scope of journal publications.

Balakireva, Lyudmila↗

DOE OSTI2020

New Simulations for Ion-Production and Back-Bombardment in GaAs Photo-guns

GaAs-based DC high voltage photo-guns used at accelerators with extensive user programs must exhibit long photocathode operating lifetime. Achieving this goal represents a significant challenge for proposed high average current facilities that must operate at tens of milliamperes or more. Specifically, the operating lifetime is dominated by ion back-bombardment of the photocathode from ionized residual gas. While numerous experiments have been performed to characterize the operating lifetime under various conditions, detailed simulations of the ion back-bombardment mechanism that explains these experiments are lacking. Recently, a new user routine was implemented using the code General Particle Tracer (GPT) to simulate electron impact ionization of residual beam line gas and simultaneously track the incident electron, the ejected electron, and the newly formed ion. This new routine was benchmarked against analytical calculations and then applied to experiments performed at the CEBAF injector at the Thomas Jefferson National Accelerator Facility to study the effectiveness of limiting ions from entering the cathode-anode gap using a positively biased anode. These simulations were performed using detailed 3D field maps produced with CST Microwave Studio describing the photo-gun electrostatics. Discussion of the experiment and the application of this new GPT routine to model the experiments will be presented at the workshop.

Yoskowitz, Joshua↗

DOE OSTI2023

A fast Monte Carlo cell-by-cell simulation for radiobiological effects in targeted radionuclide therapy using pre-calculated single-particle track standard DNA damage data

Introduction: We developed a new method that drastically speeds up radiobiological Monte Carlo radiation-track-structure (MC-RTS) calculations on a cell-by-cell basis. Methods: The technique is based on random sampling and superposition of single-particle track (SPT) standard DNA damage (SDD) files from a “pre-calculated” data library, constructed using the RTS code TOPAS-nBio, with “time stamps” manually added to incorporate dose-rate effects. This time-stamped SDD file can then be input into MEDRAS, a mechanistic kinetic model that calculates various radiation-induced biological endpoints, such as DNA double-strand breaks (DSBs), misrepairs and chromosomal aberrations, and cell death. As a benchmark validation of the approach, we calculated the predicted energy-dependent DSB yield and the ratio of direct-to-total DNA damage, both of which agreed with published in vitro experimental data. We subsequently applied the method to perform a superfast cell-by-cell simulation of an experimental in vitro system consisting of neuroendocrine tumor cells uniformly incubated with 177 Lu. Results and discussion: The results for residual DSBs, both at 24 and 48 h post-irradiation, are in line with the published literature values. Our work serves as a proof-of-concept demonstration of the feasibility of a cost-effective “in silico clonogenic cell survival assay” for the computational design and development of radiopharmaceuticals and novel radiotherapy treatments more generally.

62 RADIOLOGY AND NUCLEAR MEDICINE↗

DOE OSTI2026

WFSUITE: A PYTHON SOFTWARE SUITE FOR X-RAY WAVEFRONT SENDING AND AT-WAVELENGTH METROLOGY

SF-26-025 WFSuite is a graphical and command-line toolkit for coded-mask-based X-ray wavefront sensing and phase reconstruction at synchrotron beamlines. It integrates analysis tools for both relative and absolute speckle-based measurements. In the relative metrology module, WFSuite implements Wavelet-transform-based X-ray Speckle Tracking (WXST) and Wavelet-transform-based Speckle Vector Tracking (WSVT) methods to retrieve differential phase and wavefront distortions by comparing speckle patterns recorded with and without the test sample. In the absolute phase module, WFSuite uses coded-mask speckle patterns and replaces the measured reference with a numerically simulated one, enablingsingle-shot wavefront reconstruction using either WXST or a neural-network-based method (SPINNet).

Rebuffi, Luca [Argonne National Laboratory (ANL), ↗

DOE OSTI2025

High-fidelity Pebble Bed Reactor Depletion Based on Pebble Tracking Transport in Griffin

The pebble tracking transport (PTT) method is a high-fidelity, heterogeneous deterministic transport technique for pebble bed reactor analysis. It discretizes the broad-group neutron transport equation in space and angle with the discontinuous finite element and the discrete ordinates method, and utilizes various solving techniques, including mesh sweeping and diffusion acceleration, to provide pebble- wise reaction rates. This work presents the extension of the PTT method to enable fuel depletion capability in the Griffin code. We discuss the implementation details of the PTT-based high-fidelity depletion where isotope inventory of all individual pebbles is tracked through pre-determined pebble flow paths in the core. The implementation is verified with a generic pebble bed reactor model. Some preliminary equilibrium core results are included. Future works are also discussed.

97 - MATHEMATICS AND COMPUTING↗

DOE OSTI2024

Prediction of microstructure formation in laser powder bed fusion process.

The datasets are results analyzing the predicted microstructures in a single track during the laser powder bed fusion additive manufacturing process. They are the outputs by running the opensource code, muMatScale (The code can be cited at: Yuan, Lang, Fattebert, Jean-Luc, and Sabau, Adrian. (2023, August 03). muMatScale. [Computer software]. https://github.com/lang-yuan/muMatScale. https://doi.org/10.11578/dc.20240112.2.) For each set of data, it contains the time-dependent information of Temperature, Fraction Solid, Grain ID, Grain Angle ( crystallographic orientations by Euler angles), and solute Composition. The dataset can be visualized by Paraview (https://www.paraview.org/ ). The 6 datasets are: 1. Baseline_base1_n4e14_dt20: baseline case with bulk nucleation density of 4E+14/m^3, undercooling of 20K, substrate nucleation density of 1.5E+15/m^3 2. Nuc_n4e15_dt20: case with bulk nucleation density of 4E+15/m^3, undercooling of 20K, substrate nucleation density of 1.5E+15/m^3 3. Nuc_n4e15_dt50: case with bulk nucleation density of 4E+15/m^3, undercooling of 50K, substrate nucleation density of 1.5E+15/m^3 4. Nuc_n6e15_dt20: case with bulk nucleation density of 4E+16/m^3, undercooling of 20K, substrate nucleation density of 1.5E+15/m^3 5. Base4_n4e14_dt20: case with bulk nucleation density of 4E+14/m^3, undercooling of 20K, substrate nucleation density of 6.0E+15/m^3 6. Base16_n4e14_dt20: case with bulk nucleation density of 4E+14/m^3, undercooling of 20K, substrate nucleation density of 2.4E+16/m^3

36 MATERIALS SCIENCE↗

DOE OSTI2022

Cascaded Control for Building HVAC Systems in Practice

Actuator hunting is a widespread and often neglected problem in the HVAC field. Hunting is typically characterized by sustained or intermittent oscillations, and can result in decreased efficiency, increased actuator wear, and poor setpoint tracking. Cascaded control loops have been shown to effectively linearize system dynamics and reduce the prevalence of hunting. This paper details the implementation of cascaded control architectures for Air Handling Unit chilled water valves at three university campus buildings. A framework for implementation the control in existing Building Automation software is developed that requires only a single line of additional code. Results gathered for more than a year show that cascaded control not only eliminates hunting in control loops with documented hunting issues, but provides better tracking and more consistent performance during all seasons. A discussion of efficiency losses due to hunting behavior is presented and illustrated with comparative data. Furthermore, an analysis of cost savings from implementing cascaded chilled water valve control is presented. Field tests show 2.2–4.4% energy savings, with additional potential savings from reduced operational costs (i.e., maintenance and controller retuning).

32 ENERGY CONSERVATION, CONSUMPTION, AND UTILIZATI↗

DOE OSTI2021

A Comparative Study of Layer Heating and Continuous Heating Methods on Prediction Accuracy of Residual Stresses in Selective Laser Melted Tube Samples

Thermal distortion and residual stresses are two important factors that affect the quality and reliability of steel parts manufactured by laser powder bed fusion (LPBF) processes. A cost-effective model for evaluation of those heat effects is needed to refine the manufacturing process and provides insights into the product design and heat treatment. In this study, the layer heating method and sophisticated track-layer scanning method were applied to simulate the thermo-mechanical response of IN625 tube parts built by LPBF. Based on the similarity of temperature field in each layer deposit, a swept mesh was constructed to perform the thermal analysis for top layer, with the rest of layers referring to the temperature by node number offsetting. A novel explicit finite element analysis code accelerated by graphics processing unit was used for the massive-element numerical analysis. The computational accuracy and efficiency of the layer heating and track-layer scanning methods were compared in detail. It is shown that layer heating method can efficiently capture the pattern of stress distribution with reasonable accuracy in stress magnitude. The grouped track-layer scanning method can predict the residual stress and strain more accurately at a higher cost (5 ~ 10×). The elastic strain distribution was compared with the measurement by X-ray diffraction, confirming the accuracy of residual stress prediction.

36 MATERIALS SCIENCE↗

DOE OSTI2025

Modeling betatron radiation using particle-in-cell codes for plasma wakefield accelerator diagnostics

The analysis of plasma wakefield acceleration experimental measurements, particularly in the characterization of photons emitted through the betatron radiation mechanism, requires the development of accurate numerical models. These computational models are crucial for supporting modern instrumentation designed to measure the single-shot, double-differential angular-energy radiation spectra resulting from interactions between beams and plasmas. Motivated by the needs of such applications, this paper presents detailed numerical models of betatron radiation generated in beam-plasma acceleration experiments. These models are based on the integration of the Liénard-Wiechert (LW) potentials, applied to computed particle trajectories. The particle trajectories are generated using three distinct methods: first, by tracking particles through idealized fields in the blowout regime of PWFA; second, by obtaining trajectories using the fast quasistatic particle-in-cell (PIC) code quickpic; and third, obtaining trajectories from the fully self-consistent PIC code osiris. To ensure the accuracy and reliability of these models, the paper includes various benchmark tests using analytical expressions, as well as employing the PIC code epoch, which takes an alternative approach by using a Monte Carlo quantum electrodynamics (QED)-based radiation model. Additionally, the paper presents simulations of the expected experimental betatron radiation spectra, taking into account parameters relevant to PWFA and plasma photocathode experiments at the SLAC FACET-II facility.

Yadav, M. [University of California, Los Angeles, ↗

DOE OSTI2023

Density variance dynamics in disparate shock tubes

This report discusses two experiments which investigate thin layer, heavy curtain fragmentation from the perspective of a Reynolds-Averaged mix model, in drastically disparate experimental regimes. The first, the centimeter/millisecond-scale “Horizontal Shock Tube” (HST) is a compressed-gas piston-driven shock tube experiment. The second, the “Multishock thin layer” (Mshock) experiment performed at the National Ignition Facility, is a micrometer/nanosecond-scale laser-driven shock tube experiment. Both are situations in which a heavy plane layer (a ‘curtain’) is initially suspended in a lighter medium. After being shocked from at least one side, the layer translates while its interfaces evolve due to the excitation of the Richtmyer-Meshkov instability at its surfaces. The evolution of density variance, which initially exists only on the surface of the layer, as it comes to encompass the whole layer interior is used as a description of layer fragmentation and dissolution. These experiments have each been simulated in the Los Alamos National Laboratory multi-physics code xRAGE, which includes fundamental hydrodynamics, extended plasma physics and radiation effects which are important to drive the high-energy density experiment, and the Besnard-Harlow-Rauenzahn (BHR) turbulence model. In each, the principal diagnostic for comparison is an experimental metric for the density (co)variance, b, which tracks the moments of the density field at the curtain interfaces and body. Due to experimental constraints in different regimes (i.e. optical diagnostics can be deployed on conventional shock tubes, while the plasma shock tubes must be imaged by x-rays; interfaces can be imposed to specification on laser-driven experiments, which are stored in the solid phase, while conventional experiments have imperfect control of the flow fields which separate the layer, etc.) the experiments are not designed to be perfect scaled cognates of one another. However, despite the separation of six orders of magnitude of scaling in time, and four in space, we are able to demonstrate that the same turbulence model, operating in the same fashion in the same computer code, is able to reproduce results in each experiment, by tracking evolution due to common relevant physics. Additionally, we will present preliminary work toward density variance comparisons in a single-interface Richtmyer-Meshkov configuration, the conventional fluid “Vertical Shock Tube” (VST) experiment, and the Modal Initial Conditions (ModCons) campaign fielded at the OMEGA-EP laser facility.

42 ENGINEERING↗