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At least 181 records · Page 10

Pinned Clouds over Industrial Sources of Heat during TRACER

An analysis of stereo-camera data from the Tracking Aerosol Convection Interactions Experiment (TRACER) campaign in Houston, Texas, reveals the existence of pinned clouds sitting atop industrial heat sources. These are not plumes of vapor and condensate emanating from stacks: The pinned shallow cumuli have cloud bases at about the lifting condensation of near-surface air. On many mornings, the pinned clouds are the only shallow cumuli in the field of view of the stereo cameras, persisting by themselves for at least an hour. On those mornings, the lower atmosphere straddles the boundary between stable and unstable, and the waste heat from industrial facilities is able to pin moist convection overhead. When solar heating of the surface becomes sufficient later in the morning, those mornings transition to having widespread shallow moist convection. Occurring within the field of view of the stereo cameras and other TRACER instruments, these pinned clouds represent steady plume-like moist convection triggered by known heat sources in a well-characterized atmosphere, making them a rich target for further study. Significance Statement This article introduces steady-state cumulus clouds observed during the Tracking Aerosol Convection Interactions Experiment (TRACER) campaign that were pinned to industrial heat sources. These pinned clouds were present in the early morning only when conditions were primed for moist convection, but for which there was not yet enough solar heating to trigger widespread convection. They persist in a statistical steady state and therefore provide a natural setting to explore the mechanisms controlling convective dynamics, which play a central role in Earth’s atmospheric circulation and radiative balance.

Atmosphere↗

Cape EGS: Frisco Pad Wells Flow Test Microseismic Data

This dataset contains microseismic data acquired during the Frisco pad flow test project led by Fervo Energy, conducted between July 17th - Aug 12th 2024, near the Utah FORGE geothermal site. The microseismic data was collected from various Utah FORGE wells: via Distributed Acoustic Sensing (DAS) fiber in 16B, and two 3-component geophones located in wells 56-32 and 78B. The dataset is structured in SEGY format, where the first six traces represent data from the geophones, and the remaining traces capture DAS data from well 16B. Each SEGY file in this dataset contains triggered microseismic events, with event initiation based on Short-Time Average over Long-Time Average (STA/LTA) detection criteria during the stimulation process. Files are grouped by time intervals and named following the structure "[WellPad][WellName][Month]_[Year]Divine_Trigger[EventNumber].sgy," indicating well pad, well name, date, and event number. Sampling parameters include a spatial sampling of approximately 2 meters for DAS channels and a temporal sampling rate of 2000 Hz, with each data record spanning 1.2 seconds. The files' coordinates are referenced to the location of the FORGE 16A-32 wellhead, positioned at UTM coordinates: Easting 334641.1891 m and Northing 4263443.693 m. The geographic coordinates for this origin are 38.50402147 latitude and -112.8963897 longitude, with an elevation of 1650.0249 meters above sea level.

15 GEOTHERMAL ENERGY↗

Evaluating Function-as-a-Service (FaaS) frameworks for the Accelerator Control System

As particle accelerator control systems evolve in complexity and scale, the need for responsive, scalable, and cost-effective computational infrastructure becomes increasingly critical. Function-as-a-Service (FaaS) offers an alternative to traditional monolithic architecture by enabling event-driven execution, automatic scaling, and fine-grained resource utilization. This paper explores the applicability and performance of FaaS frameworks in the context of a modern particle accelerator control system, with the objective of evaluating their suitability for short lived and triggered workloads. In this paper, we evaluate prominent open-source FaaS platforms in executing functional logic, triggers, and diagnostics routines. Evaluation metrics consist of cold-start latency, scalability, performance, integration with other open-source tools like Kafka. Experimental workloads were designed to simulate real-world control tasks when implemented as stateless FaaS functions. These workloads were benchmarked under various invocation loads and network conditions. Self-hosted FaaS platforms, when deployed within accelerator networks, offer greater control over execution environment, better integration with legacy systems, and support for real-time guarantees when paired with message queues. Based on lessons learned and evaluation metrics, this paper describes reliability of the FaaS framework for the Accelerator Control Systems (ACS).

Jaikar, A. [Fermilab] (ORCID:0000000332046217)↗

Elucidating the mechanical and thermal response of nanotwinned Ni alloys

Transformative advances in nanoscale materials synthesis, characterization and modeling are enabling the synthesis of materials with unprecedent properties and greater understanding of the nanoscale mechanisms that underpin these properties. Nanotwinned Cu alloys have received considerable attention due to their impressive balance of strength and ductility, but they have limited microstructural stability. Recent instantiation of nanotwins in sputter deposited Ni-Mo-W, and several commercial Ni-based superalloys, point to the potential development of a new class of high temperature materials with a very beneficial suite of mechanical and physical properties. The experimental study described in this report was undertaken to elucidate the nanoscale origins of the thermal and mechanical behavior of nanotwinned Ni alloys. Micropillar compression experiments have shown nanotwinned Ni 85 Mo 15-x W x alloys to possess unusually high strengths above 3.5GPa and enhanced microstructural stability. The strength of these nanotwinned alloys is determined by the abrupt formation of shear bands. This study focused on identifying the nanoscale trigger, or triggers, for shear banding in nanotwinned materials using in situ experiments and atomic-scale postmortem analysis. Contrasting and comparing the mechanical response and postmortem nanostructures of “Mo-rich” and “W-rich” nanotwinned specimens elucidated the importance of the lateral motion of easy glide defects that results in erasure of twins and local coarsening of the nanotwinned microstructure. This twin coarsening was then associated with very localized plasticity, strain softening, and shear band formation. The difference between alloys was further studied by considering the role of various material factors: stacking fault energy, coherent twin boundary spacing and flatness, grain size, and the interactions of solute atoms with twin and grain boundaries. The effect of alloy composition and sputtering power and temperature were also investigated and used to control twin spacing and geometry. Combined with atomic-scale simulations, these experiments insights should allow us to identify strategies for achieving concomitant ultrahigh strength and ductility in nanotwinned Ni alloys. In parallel but synergistic studies, our work was buoyed by collaborative state-of-the-art nanoscale orientation and strain mapping at the DOE National Center for Electron Microscopy (NCEM). For example, novel 4D-STEM techniques were used to acquire nanoscale strain maps. The extremely fine twin spacing limited our measurements of atomic-scale thermal expansion within twins, but recent results from NCEM suggest that it will soon be possible to conduct such measurements and to unravel the origins of the novel thermal expansion characteristics of nanotwinned Ni alloys.

36 MATERIALS SCIENCE↗

Detuned synchronized waveform averaging for reducing distortions due to sample interleaving

This invention introduces a method for optimally detuning the ratio of analog-to-digital (ADC) sample rate and trigger rate during waveform averaging to minimize the deleterious effects from sample interleaving. A prescription is described for determining the optimal detuning factor for the ADC or trigger rate in any scenario, depending on the number of ADC cores used and the limited tuning resolution of the clock rates for a specific implementation.

42 ENGINEERING↗

ARC-SAFE: Accelerated Response semiconducting Contactors and Surge Attenuation For DC Electrical systems (Final Scientific/Technical Report)

The landscape of power transmission and distribution is quickly evolving as more power conversion is done through power electronics and transmitted or distributed at medium voltage direct current (MVDC). As power electronics tend to store less energy and be less resilient to faults than conventional power transformers, a reliable and fast protection against faults is critical to protect power electronics (PE) based infrastructure, especially for medium- and high-voltage applications. This motivates the development of PE based protection circuits to replace slower contemporary electromechanical breakers. In this project a novel PE based MVDC circuit breaker is developed; the new design is comprised of 1) a normally-on leg made of commercially-available, cascaded SiC junction field effect transistors (JFETs) with a passive balancing network, and 2) a normally-off leg based on an optically-triggered gallium nitride (GaN) photoconductive semiconductor switch (PCSS). The normally-off leg was designed to be quickly turned on, to divert current to an auxiliary dissipative circuit, as the normally-on leg is turned off. This approach, using solid-state devices, was selected for a high-performance, fast-switching operation for the DC circuit breaker as compared to approaches that use slower mechanical switches. To be practical, the circuit breaker must have low conduction loss (low Ron) in the normally-on leg and fast coordinated triggering of the normally-off leg to avoid damage from inductive flyback, which could be considerable for long lengths of cable.

24 POWER TRANSMISSION AND DISTRIBUTION↗

Evaluating the Effectiveness of a Detection and Deterrent System in Reducing Golden Eagle Fatalities at Operational Wind Facilities

The Renewable Energy Wildlife Institute (REWI) was appointed as the prime awardee of DOE award number DE-EE0007883 to lead a team of scientists, wind developers, and technology manufacturers toward the overarching goal of evaluating the effectiveness of the current DTBird system in minimizing the risk of golden eagles (Aquila chrysaetos) and other large soaring raptors from approaching the rotor-swept zone (RSZ) of operating wind turbines. As part of this goal, the team set out to 1) quantify the expected reduction in collision risk for golden eagles from operation of the detection and deterrence modules in a manner that supports the approach used by the U.S. Fish and Wildlife Service (USFWS) to assess and credit facility operators for their efforts to minimize predicted collision fatalities and 2) provide information to help improve the technology to maximize its effectiveness. DTBird is an automated detection and audio deterrent system created by the Spanish company Liquen, designed to discourage birds from entering the RSZ of spinning wind turbines. The system uses cameras to automatically detect airborne targets of interest, records each such event in an online database, and triggers a warning signal (loud sound) if the tracked object has moved close to the turbine. If the object moves even closer to the RSZ, a more aggressive dissuasion signal is broadcast. To meet our objectives, the team conducted a two-year experiment at the Goodnoe Hills wind facility in Washington state, in which 14 turbines were outfitted with DTBird units. Daily, each DTBird-equipped turbine was randomly assigned to a control or treatment group. Treatment turbines operated with DTBird running as intended—broadcasting warning or deterrent signals when DTBird detected a target within range. On control turbines, no sound signals were broadcast if a moving target triggered the DTBird system. The team also flew unmanned aerial vehicles (UAVs) designed to coarsely mimic the general size, weight, and coloration of golden eagles in programmed flight transects across DTBird detection ranges to quantify DTBird’s ability to detect intended targets and to evaluate factors that influence the probability of detection and DTBird’s response distances. Additionally, the team evaluated the behavioral responses of in situ eagles exposed to spinning turbines alone (visual and sound influences) versus spinning turbines plus broadcasted DTBird audio deterrents, to estimate the effectiveness of deterrence by the DTBird system. The data and results from these investigations were combined with those from a pilot study conducted at the Manzana Wind Power Project in California to better evaluate DTBird’s effectiveness across different landscapes.

17 WIND ENERGY↗

Design and construction of the CMS Outer Tracker for the Phase-2 Upgrade

he High Luminosity LHC (HL-LHC) is expected to deliver an integrated luminosity of $3000-4000$~fb$^{-1}$ after 10 years of operation with peak instantaneous luminosity reaching about $5-7.5\times10^{34}$cm$^{-2}$s$^{-1}$. During Long Shutdown 3, several components of the CMS detector will undergo major changes, called Phase-2 upgrade, to be able to operate in the challenging environment of the HL-LHC. The current CMS silicon strip tracker has to be replaced with a new detector. The Phase-2 Outer Tracker (OT) will have higher radiation tolerance, higher granularity, and the capability to handle higher data rates compared to the current system. Another key feature of the OT will be to provide tracking information to the Level-1 (L1) trigger, allowing trigger rates to be kept at a sustainable level without sacrificing physics potential. For this, the OT will be made out of modules with two closely spaced sensors read out by front-end ASICs, which can correlate hits in the two sensors creating short track segments called stubs. The stubs will be used for tracking in the L1 track finder. The modules come in two flavors: strip-strip (2S) and pixel-strip (PS), which contain different sensor configurations and multiple ASICs. In this contribution, the design of the CMS Phase-2 OT, the technological choices, and the quality assurance (QA) procedures used to ensure the functionality of the modules will be reported. The contribution will cover the first results with pre-production devices and the different aspects taken into account during the QA: from fulfilling the precision specification of the module assembly procedure to ensuring the proper communication between the different ASICs on the module. The module noise performance is also checked and the full module functionality is verified at different temperatures.

Zoi, Irene↗

Design and Construction of the CMS Outer Tracker for the Phase-2 Upgrade

The High Luminosity LHC (HL-LHC) is expected to deliver an integrated luminosity of 3000-4000~fb$^{-1}$ after 10 years of operation with peak instantaneous luminosity reaching about 5-7.5$\times10^{34}$cm$^{-2}$s$^{-1}$. During Long Shutdown 3, several components of the CMS detector will undergo major changes, called Phase-2 upgrades, to be able to operate in the challenging environment of the HL-LHC. The current CMS tracker will be replaced. The Phase-2 Outer Tracker (OT) will have high radiation tolerance, higher granularity, and the capability to handle higher data rates. Moreover, the OT will provide tracking information to the Level-1 trigger, for the first time at hadron colliders, allowing trigger rates to be kept at a sustainable level without sacrificing physics potential. For this, the OT will be made of modules with two closely spaced silicon sensors read out by front-end ASICs, which can correlate hits in the two sensors creating short track segments (stubs), used for tracking in the L1 track finder. The modules come in two flavors: strip-strip (2S) and pixel-strip (PS), containing different sensor configurations and multiple ASICs. This contribution will present the design of the Phase-2 OT, the first results with pre-production devices, and the quality assurance procedures used to ensure the functionality of the modules: from fulfilling the precision specification of the module assembly procedure to ensuring the proper communication among the module's ASICs.

43 PARTICLE ACCELERATORS↗

The ICARUS light detection system (Fermilab Italian summer student program 2023)

The ICARUS T600 detector is the largest Liquid Argon Time Projection Chamber ever used on a neutrino beam, and it acts as the far detector of the Short Baseline Neutrino program at Fermilab. Its purpose is the study of the possibility of the existence of a fourth sterile neutrino in the O(eV2) mass range that could take part in the neutrino oscillations. The light detection system of the ICARUS detector plays the role of localising in space and time the neutrino interactions taking place inside the detector, collecting the argon scintillation photons generated when an event occurs. This light detection system also has a crucial role in the trigger system and the rejection of the huge amount of background cosmic events, working together with the trigger request signals sent by the beam complex. In August 2023 part of the cables that are used to carry the signals from the photomultipliers to the electronics were replaced with a new model, because a deterioration of the quality of the signal inside the cables had previously been observed. An analysis of the performance of the new cables was carried out, comparing laser run data collected before and after the change of the cable model, and it was proved that the introduction of the new cables lead to a general improvement of the quality of the signals reaching the electronics.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗

Ultrafast Light-Induced Magnetoelectric Effect in van der Waals Magnetic Semiconductor Heterostructures

Atomic-scale heterostructures of van der Waals (vdW) magnets and semiconductors provide a unique environment for exploring magnetic dynamics. In contrast to typical photothermal excitation of precessional magnetization dynamics by a pump laser pulse, we find that ultrafast optical excitation of a WS2/CrGeTe3 (CGT) bilayer produces an opposite sign of magnetic torque compared to an isolated CGT film. Experimental observations by time-resolved magneto-optic Kerr effect (TR-MOKE) and theoretical analysis by density functional theory (DFT) and Landau-Lifshitz-Gilbert (LLG) simulations support a mechanism in which charge transfer of photoexcited carriers across the interface alters the perpendicular magnetic anisotropy, which in turn generates a torque on the magnetic layer to trigger precessional magnetization dynamics. These results provide new avenues for ultrafast manipulation of magnetization in vdW heterostructures with type-II band alignments. Lastly, we show that optically-generated spin currents from WS2 into CGT can also trigger precessional dynamics via angular momentum transfer.

Zhou, Wenyi [The Ohio State University]↗

Module Testing Procedures and Results for the CMS Phase-2 Outer Tracker Upgrade at Fermilab

The High-Luminosity LHC (HL-LHC) will operate at significantly increased luminosities and is expected to deliver about 3000 $fb^{-1}$ of proton-proton collision data at $\sqrt{s}=14$ TeV over a decade of operation. To maintain efficient tracking and triggering performance under high pileup and radiation conditions, the CMS experiment is upgrading its tracking detector for Phase-2 operations. The upgraded Outer Tracker (OT) will consist of Pixel-Strip (PS) and Strip-Strip (2S) silicon modules capable of providing tracking information to the Level-1 trigger at 40 MHz. Production and qualification of OT modules have been ongoing for about one year across several assembly and testing centers in the US, Europe, India, and Pakistan, requiring extensive testing to ensure stable operation in the HL-LHC environment. Fermilab is responsible for the production and testing of a significant fraction of the OT modules. The testing activities include IV characterization of silicon sensors, noise and pedestal measurements, verification of communication between module components, and burn-in studies using cold-box systems operated under controlled thermal conditions. Results from module testing and qualification studies performed during production will be presented.

Baradia, Sweta [UC, Davis (main)]↗

Search for HH → bbτ⁺τ⁻ Using Run 3 Scouting Data Analyze b-tagging and tau-tagging Performance with Unified Particle Transformer

B-tagging and tau-tagging performances play an important role in the search for the rare event HH → bbτ⁺τ⁻. A transformer-based neural network, Unified Particle Transformer, is applied for both tagging tasks, and Run 3 proton–proton collision scouting data at center-of-mass energy of 13.6 TeV is used. The scouting data stream accepts events at a much higher rate compared to traditional triggers, but stores only the objects reconstructed in the trigger, no low-level detector information. Therefore, existing taggers trained for the offline event reconstruction cannot be used. Analysis of the SoftMax plots, ROC/AUC curves, confusion matrix, accuracy and losses are used to evaluate model performance. Specifically, the tagging efficiency of the signal and misidentification probability across multiple background processes are compared for varying working points. Different training samples with distinct distributions of jet flavors are utilized and related model performances are analyzed. Interpretability methods, such as Integrated Gradients, may further be applied to study the input features’ influence on the model’s decisions, providing insights into potential improvements.

Chen, Blair [Purdue U., West Lafayette; Fermilab]↗

Real-Time Anomaly Detection for Beyond Standard Model Searches in ProtoDUNE Horizontal Drift

This paper summarizes work conducted throughout a SULI internship at Fermi National Accelerator Laboratory focused on building an unsupervised machine learning model for real-time anomaly detection in ProtoDUNE Horizontal Drift. Using simulated data, we trained an autoencoder model on a pure cosmic dataset, and evaluated it on both cosmic and neutrino events---making the model an anomaly detector. The goal was to make a model which matches or exceeds the current ADC Simple Window trigger algorithm so that our model can perform at the same rate but provide sensitivity to potential beyond-the-Standard-Model (BSM) signatures. In the end, we were able to construct a model which slightly exceeds the capabilities of the ADC Simple Window while remaining completely unsupervised, achieving $31.9 \pm 0.2$\% ($26.6 \pm 0.2$\%) $\nu$ efficiency at 5 Hz (2 Hz), a 3.6 (3.2) percentage point increase. Additionally, $17.5 \pm 0.3$\% ($18.3 \pm 0.3$\%) of the events that passed the autoencoder at 5 Hz (2 Hz) were missed by the current trigger algorithm. Future work will investigate alternative normalization methods, including quantile transformation, and evaluate the model on ProtoDUNE-HD detector-glitch data if that data becomes available.

Wilson, Cameron C. [Cincinnati U., RWC]↗

Real-Time Anomaly Detection for Beyond Standard Model Searches in ProtoDUNE Horizontal Drift

This paper summarizes work conducted throughout a SULI internship at Fermi National Accelerator Laboratory focused on building an unsupervised machine learning model for real-time anomaly detection in ProtoDUNE Horizontal Drift. Using simulated data, we trained an autoencoder model on a pure cosmic dataset, and evaluated it on both cosmic and neutrino events---making the model an anomaly detector. The goal was to make a model which matches or exceeds the current ADC Simple Window trigger algorithm so that our model can perform at the same rate but provide sensitivity to potential beyond-the-Standard-Model (BSM) signatures. In the end, we were able to construct a model which slightly exceeds the capabilities of the ADC Simple Window while remaining completely unsupervised, achieving $31.9 \pm 0.2$\% ($26.6 \pm 0.2$\%) $\nu$ efficiency at 5 Hz (2 Hz), a 3.6 (3.2) percentage point increase. Additionally, $17.5 \pm 0.3$\% ($18.3 \pm 0.3$\%) of the events that passed the autoencoder at 5 Hz (2 Hz) were missed by the current trigger algorithm. Future work will investigate alternative normalization methods, including quantile transformation, and evaluate the model on ProtoDUNE-HD detector-glitch data if that data becomes available.

Wilson, Cameron C. [Cincinnati U., RWC]↗

ProtoDUNE-VD for Beyond the Standard Model Searches: Initial Studies and Future Prospects

The Deep Underground Neutrino Experiment (DUNE) is a next-generation long-baseline neutrino program designed to address fundamental questions in neutrino and astroparticle physics. ProtoDUNE, operating at the CERN Neutrino Platform, serves as a full-scale prototype for the DUNE Far Detector. In particular, the ProtoDUNE Vertical Drift (ProtoDUNE-VD) detector provides a powerful testbed for validating reconstruction and event selection techniques for future DUNE operations. In addition to detector R&D, ProtoDUNE enables a novel parasitic beam-dump search for beyond-the-Standard-Model (BSM) particles. However, it faces several challenges. Most notably, the ProtoDUNE-VD modules operate on the surface and are consequently exposed to an intense flux of cosmic rays, which requires a dedicated trigger. In addition, standard neutrinos are also produced in the T2 target area from the decay of unstable mesons, constituting a relevant background, which needs to be well understood and characterized a priori. We present the first studies based on 2025 data taken with a trigger designed to identify neutrino candidates at ProtoDUNE-VD. ProtoDUNE-VD’s high-resolution LArTPC imaging allows detailed reconstruction of decay and scattering signatures. This work demonstrates the complementarity of traditional tools such as Pandora and modern machine-learning approaches, providing key input for atmospheric neutrino and rare-event searches in the DUNE Vertical Drift program.

Bagdu, Halit [U. Iowa, Iowa City]↗

Wasserstein Normalized Autoencoder for Anomaly Detection in ProtoDUNE Vertical-Drift Detector

ProtoDUNE Vertical Drift needs a selective triggering algorithm. The detector sits on Earth's surface, so cosmic activity dominates its data. Our goal in this paper is to trigger on neutrino events more robustly than the current deployed Analog-to-Digital Converter Simple Window (ADCSW) model and, eventually, search for signals of Beyond Standard Model (BSM) physics at DUNE as our ultimate North Star objective. As a step towards this goal, we evaluate a Wasserstein Normalized Autoencoder (WNAE) on simulated collection-plane only windows of shape $1\times10\times10$ where Neutrinos act as our BSM-proxy and Cosmic-ray Muons serve as our learned background. The network parameters are fitted using only cosmic-ray muon events as background in order to maintain an unsupervised pipeline. Training uses finite-step Langevin $x^-$ samples, positive-sample reconstruction energy, and an empirical sliced $2$-Wasserstein objective to learn a normalized Boltzmann energy model. We then calibrate on a nominal $5\,\mathrm{Hz}$ operating threshold calculated from cosmic validation data. Both WNAE and ADCSW accept 311 of 194,083 held-out cosmic background events at this $5\,\mathrm{Hz}$ threshold. We found that WNAE accepts 9,677 of 34,634 neutrino-proxy events $(27.9\pm0.24)\%$, compared with 10,076 $(29.1\pm0.24)\%$ for ADCSW, an observed WNAE-minus-ADCSW difference of $-1.15\%$. At another nominal $2\,\mathrm{Hz}$ target threshold, the corresponding efficiencies are $(20.5\pm0.22)\%$ and $(22.6\pm0.22)\%$, respectively. Of the WNAE-selected neutrino proxies at $5\,\mathrm{Hz}$, $(20.8\pm0.4)\%$ of the classified neutrino-proxy events are unique to WNAE, where the uncertainty is an absolute binomial standard error of $0.4\%$.

Zheng, Jake [U. Chicago (main)] (ORCID:00090002189↗

Dual-RNA-sequencing to elucidate the interactions between sorghum and Colletotrichum sublineola

In warm and humid regions, the productivity of sorghum is significantly limited by the fungal hemibiotrophic pathogen Colletotrichum sublineola , the causal agent of anthracnose, a problematic disease of sorghum ( Sorghum bicolor (L.) Moench) that can result in grain and biomass yield losses of up to 50%. Despite available genomic resources of both the host and fungal pathogen, the molecular basis of sorghum− C. sublineola interactions are poorly understood. By employing a dual-RNA sequencing approach, the molecular crosstalk between sorghum and C. sublineola can be elucidated. In this study, we examined the transcriptomes of four resistant sorghum accessions from the sorghum association panel (SAP) at varying time points post-infection with C. sublineola . Approximately 0.3% and 93% of the reads mapped to the genomes of C. sublineola and Sorghum bicolor , respectively. Expression profiling of in vitro versus in planta C. sublineola at 1-, 3-, and 5-days post-infection (dpi) indicated that genes encoding secreted candidate effectors, carbohydrate-active enzymes (CAZymes), and membrane transporters increased in expression during the transition from the biotrophic to the necrotrophic phase (3 dpi). The hallmark of the pathogen-associated molecular pattern (PAMP)-triggered immunity in sorghum includes the production of reactive oxygen species (ROS) and phytoalexins. The majority of effector candidates secreted by C. sublineola were predicted to be localized in the host apoplast, where they could interfere with the PAMP-triggered immunity response, specifically in the host ROS signaling pathway. The genes encoding critical molecular factors influencing pathogenicity identified in this study are a useful resource for subsequent genetic experiments aimed at validating their contributions to pathogen virulence. This comprehensive study not only provides a better understanding of the biology of C. sublineola but also supports the long-term goal of developing resistant sorghum cultivars.

Vela, Saddie↗