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Search indexed NASA NTRS and DOE OSTI research on propulsion, heat transfer, battery materials and energy systems. Follow report and document links to the original sources.

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All sourcesNASA NTRSDOE OSTI
DOE OSTI2025

EnergyPlus-MCP: A model-context-protocol server for ai-driven building energy modeling

Traditional building energy modeling with the EnergyPlus building performance simulation engine requires domain expertise, programming skills, and intensive manual efforts limiting its effective adoption. This paper introduces EnergyPlus-MCP, the first open-source Model Context Protocol (MCP) server specifically designed for EnergyPlus simulation workflows, establishing a new foundational infrastructure for AI-driven building energy modeling. The MCP server implements a layered architecture with 35 specialized tools spanning model management, editing and analysis, HVAC and other systems configuration inspection, and simulation execution, enabling Large Language Models to interact with EnergyPlus through conversational interfaces. The server addresses critical workflow barriers by automating model validation, streamlining energy efficiency measures modification, and providing intelligent output management with interactive visualization. Through practical demonstrations using a multi-zone building retrofit analysis, we show how the EnergyPlus-MCP server significantly reduces manual efforts while maintaining full simulation rigor. By providing accessible natural language interfaces to sophisticated building energy analysis, this approach enables scalable deployment of simulation expertise across public and private organizations, educational institutions, and research teams, fundamentally transforming traditional building energy modeling practices.

AI↗
DOE OSTI2024

Deciphering the Cofilin Oligomers via Intermolecular Disulfide Bond Formation: A Coarse-Grained Molecular Dynamics Approach to Understanding Cofilin’s Regulation on Actin Filaments

Cofilin, a key actin-binding protein, orchestrates the dynamics of the actomyosin network through its actin-severing activity and by promoting the recycling of actin monomers. Recent experimental work suggests that cofilin also forms functionally distinct oligomers through thiol post-translational modification (PTM) that encourages actin nucleation and assembly. Despite these advances, the structural conformations of cofilin oligomers that modulate actin activity remain elusive because there are combinatorial ways to oxidize thiols in cysteines to form disulfide bonds rapidly. This study employs molecular dynamics simulations to investigate human cofilin 1 as a case study for exploring cofilin dimers via disulfide bond formation. Using the free energy profiling, our simulations unveil a range of probable cofilin dimer structures not represented in current Protein Data Bank entries. These candidate dimers are characterized by their distinct population distributions and relative free energies. Of particular note is a dimer featuring an interface between cysteines 139 and 147 residues, which demonstrates stable free energy characteristics and intriguingly symmetrical geometry. In contrast, the experimentally proposed dimer structure exhibits a less stable free energy profile. Here, we also evaluate frustration quantification based on the energy landscape theory in the protein-protein interactions at the dimer interfaces. Notably, the 39-39 dimer configuration emerges as a promising candidate for forming cofilin tetramers, as substantiated by frustration analysis. Additionally, docking simulations with actin filaments further evaluate the stability of these cofilin dimer-actin complexes. Our findings thus offer a computational framework for understanding the role of thiol post-translational modification cofilin proteins in regulating oligomerization, and the subsequent cofilin-mediated actin dynamics in the actomyosin network.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗
DOE OSTI2016

Ab Initio Thermodynamics and Kinetics for Coalescence of Two-Dimensional Nanoislands and Nanopits on Metal (100) Surfaces

Postdeposition coalescence or sintering of pairs of lowstrain two-dimensional nanoislands and nanopits on unreconstructed metal (100) surfaces is typically mediated by diffusion along step edges, and is highly sensitive to the associated kinetics. Thus, for selected systems, we provide an ab initio density functional theory (DFT) level description of both system thermodynamics and kinetics. Specifically, we assess lateral pair and trio interactions both conventionally with adatoms at 4-fold hollow adsorption sites, and unconventionally with one adatom at the bridge-site transition state for hopping. Rather than use standard cluster expansion algorithms, these interactions are determined subject to the constraint that key step-edge properties are recovered exactly. Together, both classes of interactions determine barriers for edge diffusion processes for any local step configuration, including diffusion along close-packed $\langle$110$\rangle$ edges, kink rounding, meandering processes at kinked $\langle$100$\rangle$ steps, and extraction processes at pit corners. Our formalism applies for homoepitaxial systems, and also for several lattice-matched heteroepitaxial systems. The barriers provide input for stochastic models of nanocluster evolution, which are analyzed by kinetic Monte Carlo simulation. Such modeling with DFT energetics from the PBEsol functional recovers extensive experimental observations of both the time scale and the island-size dependence for sintering of Ag islands on Ag(100). In conclusion, description of pit sintering on Ag(100) is more delicate, being sensitive to specific unconventional trio interactions.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗
DOE OSTI2022

Manifesting Direction-Specific Complexation in [HFIP –H ·H 2 O 2 ] – : Exclusive Formation of a High-Lying Conformation

Size-selective, negative ion photoelectron spectroscopy in conjunction with quantum chemical calculations is employed to investigate the geometric and electronic structures of a protype system in catalytic olefin epoxidation research, i.e., deprotonated hexafluoroisopropanol ([HFIP -H ] - ) complexed with hydrogen peroxide (H 2 O 2 ). Spectral assignments and molecular electrostatic surface analyses unveil a surprising prevalent existence of a high-lying isomer with asymmetric dual hydrogenbonding configuration that is preferably formed driven by influential directionspecific electrostatic interactions upon H 2 O 2 approaching [HFIP -H ] - anion. Subsequent inspections of molecular orbitals, charge and spin density distributions indicate the occurrence of partial charge transfer from [HFIP -H ] - to H 2 O 2 upon hydrogen bonding interactions. Accompanying with electron detachment, a proton transfer occurs to form the neutral complex of [HFIP•HOO • ] structure. In conclusion, this work conspicuously illustrates the importance of directionality encoded in intermolecular interactions involving asymmetric and complex molecules, while the produced hydroperoxyl radical HOO • offers a possible new pathway in olefin epoxidation chemistry.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗
DOE OSTI2017

Inverted battery design as ion generator for interfacing with biosystems

In a lithium-ion battery, electrons are released from the anode and go through an external electronic circuit to power devices, while ions simultaneously transfer through internal ionic media to meet with electrons at the cathode. Inspired by the fundamental electrochemistry of the lithium-ion battery, we envision a cell that can generate a current of ions instead of electrons, so that ions can be used for potential applications in biosystems. Based on this concept, we report an ‘electron battery’ configuration in which ions travel through an external circuit to interact with the intended biosystem whereas electrons are transported internally. As a proof-of-concept, we demonstrate the application of the electron battery by stimulating a monolayer of cultured cells, which fluoresces a calcium ion wave at a controlled ionic current. Electron batteries with the capability to generate a tunable ionic current could pave the way towards precise ion-system control in a broad range of biological applications

25 ENERGY STORAGE↗
DOE OSTI2022

Adsorbate chemical environment-based machine learning framework for heterogeneous catalysis

Abstract Heterogeneous catalytic reactions are influenced by a subtle interplay of atomic-scale factors, ranging from the catalysts’ local morphology to the presence of high adsorbate coverages. Describing such phenomena via computational models requires generation and analysis of a large space of atomic configurations. To address this challenge, we present Adsorbate Chemical Environment-based Graph Convolution Neural Network (ACE-GCN), a screening workflow that accounts for atomistic configurations comprising diverse adsorbates, binding locations, coordination environments, and substrate morphologies. Using this workflow, we develop catalyst surface models for two illustrative systems: (i) NO adsorbed on a Pt 3 Sn(111) alloy surface, of interest for nitrate electroreduction processes, where high adsorbate coverages combined with low symmetry of the alloy substrate produce a large configurational space, and (ii) OH* adsorbed on a stepped Pt(221) facet, of relevance to the Oxygen Reduction Reaction, where configurational complexity results from the presence of irregular crystal surfaces, high adsorbate coverages, and directionally-dependent adsorbate-adsorbate interactions. In both cases, the ACE-GCN model, trained on a fraction (~10%) of the total DFT-relaxed configurations, successfully describes trends in the relative stabilities of unrelaxed atomic configurations sampled from a large configurational space. This approach is expected to accelerate development of rigorous descriptions of catalyst surfaces under in-situ conditions.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗
DOE OSTI2015

New model of calculating the energy transfer efficiency for the spherical theta-pinch device

Ion-beam-plasma-interaction plays an important role in the field of warm dense matter and inertial confinement fusion. A spherical theta pinch is proposed to act as a plasma target in various applications including a plasma stripper cell. One key parameter for such applications is the free electron density. A linear dependency of this density to the amount of energy transferred into the plasma from an energy storage was found by Teske. Since the amount of stored energy is known, the energy transfer efficiency is a reliable parameter for the design of a spherical theta pinch device. As the main assumption of a constant reflected plasma resistance is contradictory by the measured data, the traditional two models of energy transfer efficiency will lead to wrong results. From measurements, the parasitic resistance is derived as constant. Based on this key parameter, a new model is proposed. Due to no assumption, the new model is considered as exact. Further, a comparison of these three different models is given at a fixed operation voltage for the full range of working gas pressures. Due to the inappropriate assumptions included in the traditional models, one owns a tendency to overestimate the energy transfer efficiency whereas the other leads to an underestimation. Applying our new model to a wide spread set of operation voltages and gas pressures, an overall picture of the energy transfer efficiency results.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗
DOE OSTI2016

Monte Carlo simulations of ionization potential depression in dense plasmas

A particle-particle grand canonical Monte Carlo model with Coulomb pair potential interaction was used to simulate modification of ionization potentials by electrostatic microfields. The Barnes-Hut tree algorithm [J. Barnes and P. Hut, Nature 324, 446 (1986)] was used to speed up calculations of electric potential. Atomic levels were approximated to be independent of the microfields as was assumed in the original paper by Ecker and Kröll [Phys. Fluids 6, 62 (1963)]; however, the available levels were limited by the corresponding mean inter-particle distance. The code was tested on hydrogen and dense aluminum plasmas. The amount of depression was up to 50% higher in the Debye-Hückel regime for hydrogen plasmas, in the high density limit, reasonable agreement was found with the Ecker-Kröll model for hydrogen plasmas and with the Stewart-Pyatt model [J. Stewart and K. Pyatt, Jr., Astrophys. J. 144, 1203 (1966)] for aluminum plasmas. Our 3D code is an improvement over the spherically symmetric simplifications of the Ecker-Kröll and Stewart-Pyatt models and is also not limited to high atomic numbers as is the underlying Thomas-Fermi model used in the Stewart-Pyatt model.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗
DOE OSTI2015

Electronic and magnetic properties of electron-doped V 2 O 5 and NaV 2 O 5

Because of its narrow split-off conduction band, doping of V 2 O 5 leads to interesting strongly correlated electrons. We study the effects of doping on V 2 O 5 's electronic and magnetic properties, either by adding electrons compensated by an artificial homogeneous background, or a virtual crystal approximation (VCA), by changing the atomic number Z V , so as to keep charge neutrality, or by explicitly introducing Na as a dopant. The former two are considered as a way to simulate injected charge by gating, the latter occurs in the vanadium bronze NaV 2 O 5 . We also simulate Na 1 - x V 2 O 5 using a virtual crystal approximation by changing the atomic number 10 ≤ Z Na ≤ 11 . The differences in the band structure, which result from how the electrons added to the band are compensated by positive charge in the three models, are compared. The electronic band structures are calculated using the quasiparticle self-consistent Q S G W method including a lattice polarization correction and the local spin density functional method with Hubbard- U corrections (LSDA+ U ). For NaV 2 O 5 , the half-filling leads to a splitting of the up- and down-spin lowest d x y band. The spins are found to prefer an antiferromagnetic ordering along the chain direction. Other spin configurations are shown to have higher energy and the exchange interactions are extracted and compared with literature. The optical conductivities are calculated and compared with experiment. Similar results are found for simply doping the band compensated by a background or virtual crystal approximation. Yet, the position of the occupied bands depends on the method chosen for compensating the charge. The most realistic way to simulate gating in which the compensating charge is kept away from the V 2 O 5 layer is the VCA with varying Z Na . The splitting between the up- and down-spin bands depends on the filling. Furthermore, we find that below a certain concentration of about 0.88 electrons per V, the FM arrangement becomes preferable over the antiferromagnetic one. The magnetic moments then gradually decrease as we lower the filling of the split-off band.

75 CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND↗
DOE OSTI2018

Search for exact local Hamiltonians for general fractional quantum Hall states

We report on our systematic attempts at finding local interactions for which the lowest-Landau- level projected composite-fermion wave functions are the unique zero energy ground states. For this purpose, we study in detail the simplest non-trivial system beyond the Laughlin states, namely bosons at filling factor ν = 2/3 and identify local constraints among clusters of particles in the ground state. By explicit calculation, we show that no Hamiltonian up to (and including) four particle in- teractions produces this state as the exact ground state, and speculate that this remains true even when interaction terms involving greater number of particles are included. Surprisingly, we can iden- tify an interaction, which imposes an energetic penalty for a specific entangled configuration of four particles with relative angular momentum of 6h, that produces a unique zero energy solution (as we have confirmed for up to 12 particles). This state, referred to as the λ-state, is not identical to the projected composite-fermion state, but the following facts suggest that the two might be topologi- cally equivalent: the two sates have a high overlap; they have the same root partition; the quantum numbers for their neutral excitations are identical; and the quantum numbers for the quasiparticle excitations also match. On the quasihole side, we find that even though the quantum numbers of the lowest energy states agree with the prediction from the composite-fermion theory, these states are not separated from the others by a clearly identifiable gap. This prevents us from making a conclusive claim regarding the topological equivalence of the λ state and the composite-fermion state. Lastly, our study illustrates how new candidate states can be identified from constraining selected many particle configurations and it would be interesting to pursue their topological classification.

75 CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND↗
DOE OSTI2022

Turbulence generation by shock interaction with a highly nonuniform medium

An initially planar shock wave propagating into a medium of nonuniform density will be perturbed, leading to the generation of postshock velocity perturbations. Using numerical simulations we study this phenomenon in the case of highly nonuniform density (order-unity normalized variance, $\sigma_\rho/\bar{\rho}\sim1$) and strong shocks (shock Mach numbers $\bar{M}_s\gtrsim10$). This leads to a highly disrupted shock and a turbulent postshock flow. We simulate this interaction for a range of shock drives and initial density configurations meant to mimic those which might be presently achieved in experiments. Theoretical considerations lead to scaling relations, which are found to reasonably predict the postshock turbulence properties. The turbulent velocity dispersion and turbulent Mach number are found to depend on the preshock density dispersion and shock speed in a manner consistent with the linear Richtymer-Meshkov instability prediction. We also show a dependence of the turbulence generation on the scale of density perturbations. The postshock pressure and density, which can be substantially reduced relative to the unperturbed case, are found to be reasonably predicted by a simplified analysis that treats the extended shock transition region as a single normal shock.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗
DOE OSTI2018

State-of-the-Art Cooling Technology for a Turbine Rotor Blade

Effective internal and external cooling of airfoils is key to maintaining component life for efficient gas turbines. Cooling designs have spanned the range from simple internal convective channels to more advanced double-walls with shaped film-cooling holes. This paper describes the development of an internal and external cooling concept for a state-of-the-art cooled turbine blade. These cooling concepts are based on a review of literature and patents, as well as, interactions with academic and industry turbine cooling experts. The cooling configuration selected and described in this paper is referred to as the “baseline” design, since this design will simultaneously be tested with other more advanced blade cooling designs in a rotating turbine test facility using a “rainbow turbine wheel” configuration. For the baseline design, the leading edge is cooled by internal jet impingement and showerhead film cooling. The midchord region of the blade contains a three-pass serpentine passage with internal discrete V-shaped trip strips to enhance the internal heat transfer coefficient (HTC). The film cooling along the midchord of the blade uses multiple rows of shaped diffusion holes. Furthermore, the trailing edge is internally cooled using jet impingement and externally film cooled through partitioned cuts on the pressure side of the blade.

01 COAL, LIGNITE, AND PEAT↗
DOE OSTI2016

Effect of the size of charged spherical macroparticles on their electrostatic interaction in an equilibrium plasma

The effect of the size of two charged spherical macroparticles on their electrostatic interaction in an equilibrium plasma is analyzed within the linearized Poisson–Botzmann model. It is established that, under the interaction of two charged dielectric macroparticles in an equilibrium plasma, the forces acting on each particle turn out to be generally unequal. The forces become equal only in the case of conducting macroparticles or in the case of dielectric macroparticles of the same size and charge. They also turn out to be equal when the surface potentials of the macroparticles remain constant under the variation of interparticle distances. Formulas are proposed that allow one to calculate the interaction force with a high degree of accuracy under the condition that the radii of macroparticles are much less than the screening length, which is usually satisfied in experiments with dusty plasmas.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗
DOE OSTI2017

Electrostatic interaction of macroparticles in a plasma in the strong screening regime

We have studied the electrostatic interaction of spherical particles in an equilibrium plasma or an electrolyte in the moderate and strong screening regimes when the macroparticle size is comparable with or much larger than the Debye screening radius. We have developed an approximate theory of the electrostatic interaction of macroparticles in the case of constant potentials of their surfaces in the weak or moderate screening regimes. In this theory, the charges of macroparticles with a fixed spacing between them are determined using vacuum capacitive coefficients, which are corrected taking into account the plasma screening effects. The force of interaction with the resultant charges is calculated based on the solution of the problem of interaction in a homogeneous dielectric (vacuum) and is multiplied by the plasma factor. We have also obtained an approximate solution to the problem in the strong screening regime. Comparison with the exact solution has demonstrated high accuracy of the proposed methods of calculation.

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗
DOE OSTI2025

Electrolyzer Cost Model

To compare material and electrical costs of different anodes for use in magnesium electrolysis, this interactive sheet is set up to manipulate values for varying configurations of geometry, material properties, and other assumed values.

Nguyen, Tuan (0000000297269764)↗
DOE OSTI2016

The Earth System Prediction Suite: Toward a Coordinated U.S. Modeling Capability

The Earth System Prediction Suite (ESPS) is a collection of flagship U.S. weather and climate models and model components that are being instrumented to conform to interoperability conventions, documented to follow metadata standards, and made available either under open-source terms or to credentialed users. Furthermore, the ESPS represents a culmination of efforts to create a common Earth system model architecture, and the advent of increasingly coordinated model development activities in the United States. ESPS component interfaces are based on the Earth System Modeling Framework (ESMF), community-developed software for building and coupling models, and the National Unified Operational Prediction Capability (NUOPC) Layer, a set of ESMF-based component templates and interoperability conventions. Our shared infrastructure simplifies the process of model coupling by guaranteeing that components conform to a set of technical and semantic behaviors. The ESPS encourages distributed, multiagency development of coupled modeling systems; controlled experimentation and testing; and exploration of novel model configurations, such as those motivated by research involving managed and interactive ensembles. ESPS codes include the Navy Global Environmental Model (NAVGEM), the Hybrid Coordinate Ocean Model (HYCOM), and the Coupled Ocean–Atmosphere Mesoscale Prediction System (COAMPS); the NOAA Environmental Modeling System (NEMS) and the Modular Ocean Model (MOM); the Community Earth System Model (CESM); and the NASA ModelE climate model and the Goddard Earth Observing System Model, version 5 (GEOS-5), atmospheric general circulation model.

54 ENVIRONMENTAL SCIENCES↗
DOE OSTI2016

STOCHASTIC PARTICLE ACCELERATION IN TURBULENCE GENERATED BY MAGNETOROTATIONAL INSTABILITY

We investigate stochastic particle acceleration in accretion flows. It is believed that magnetorotational instability (MRI) generates turbulence inside accretion flows and that cosmic rays (CRs) are accelerated by the turbulence. We calculate equations of motion for CRs in the turbulent fields generated by MRI with the shearing box approximation and without back reaction to the field. Our results show that the CRs randomly gain or lose their energy through interaction with the turbulent fields. The CRs diffuse in the configuration space anisotropically: the diffusion coefficient in the direction of the unperturbed flow is about 20 times higher than the Bohm coefficient, while those in the other directions are only a few times higher than the Bohm. The momentum distribution is isotropic and its evolution can be described by the diffusion equation in momentum space where the diffusion coefficient is a power-law function of the CR momentum. We show that the shear acceleration works efficiently for energetic particles. We also cautiously note that in the shearing box approximation, particles that cross the simulation box many times along the radial direction undergo unphysical runaway acceleration by the Lorentz transformation, which needs to be taken into account with special care.

79 ASTRONOMY AND ASTROPHYSICS↗

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