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NASA NTRSDate not supplied

Measurement Techniques for the High-Contrast and in-Field Stray-Light Performance of OCI

Scheduled for launch in January 2024, the PACE mission represents NASA’s next investment in ocean biology, clouds, and aerosol data records [1]. A key feature of PACE is the inclusion of an advanced satellite radiometer known as the Ocean Color Instrument (OCI), a global mapping radiometer that combines multispectral and hyperspectral remote sensing. A critical requirement for OCI is the high-contrast or spatial cross-talk specification (also referred to as in-field stray-light response). The requirement states that for global top-of-atmosphere radiances based on measured MODIS radiances, the global average residual contamination shall be less than 0.15% for any multispectral band. Accurate resolution of high contrast in TOA radiance images is important to estimate stray light contamination due to clouds, for studying small scale features like ocean fronts and for working in coastal and estuarine areas where the scales are 1km. This occurs in all wavelengths in the spatial direction. Knowledge of high contrast resolution makes up part of the artifact budget. Accurate measurement of the high-contrast performance of OCI requires laboratory Ground Support Equipment (GSE) that projects a scene of sufficient quality that the unwanted stray light of the GSE itself is not confused with the stray light response of the telescope. This paper concerns the development, analyses and test of the GSE to ensure the quality of the projected image is sufficient to verify the OCI requirements. Optical models were developed for both the instrument as well as the GSE and laboratory environment. Simulation of various non-ideal parameters were critical to accurately predict performance. Measurements using COTS cameras and lenses were also made of the projected GSE image to reasonably verify the optical model predictions. Measured and modelled results from OCI are discussed.

OCI, PACE, LSF, PSF, Stray-light, Contrast, Cross-↗
NASA NTRSDate not supplied

TPSAS-NF1676L-34796-DND

The recently completed 2015-2017 EVS-2 mission NAAMES (The North Atlantic Aerosols and Marine Ecosystems Study) provides a unique set of airborne remote sensing and ship-based in situ measurements in a remote and under-sampled region of the Earth?s ocean. The NASA SABOR (Ship-Aircraft Bio-Optical Research) campaign was conducted during the summer of 2014, also in the Atlantic Ocean, out of the Chesapeake Bay and in the eastern coastal region of the United States. For both campaigns, the NASA GISS Research Scanning Polarimeter, a multi-angle, multi-spectral polarimeter measured the upwelling polarized radiances from aircraft. And for both campaigns, ship-based in situ measurements of the ocean were collected jointly with the aircraft measurements. We present results from the new RSP-MAPP (1) that is based on optimal estimation and that can retrieve simultaneous aerosol microphysical properties (including effective radius, single-scattering albedo, and real refractive index) and ocean color products using accurate radiative transfer, Mie calculations, and the DP (Detritus Plankton) series of accurate, numerically efficient ocean bio-optical models. The RSP-MAPP algorithm was applied to data collected during SABOR and NAAMES to retrieve aerosol microphysics and ocean products for all Aerosols-Above-Ocean (AAO) scenes. The RSP-MAPP products are compared against i) collocated aerosol extinction and backscatter profiles collected by the NASA LaRC airborne High Spectral Resolution Lidar (HSRL-1), including lidar depth profiles of the ocean diffuse attenuation coefficient and the hemispherical backscatter coefficient, and ii) collocated ship-based in situ measurements of the ocean.

Snorre Stamnes↗
NASA NTRS2017

Asteroid Generated Tsunami Workshop: Summary of NASA/NOAA Workshop

A two-day workshop on tsunami generated by asteroid impacts in the ocean resulted in a broad consensus that the asteroid impact tsunami threat is not as great as previously thought, that airburst events in particular are unlikely to produce significant damage by tsunami, and that the tsunami contribution to the global ensemble impact hazard is substantially less than the contribution from land impacts. The workshop, led by Ethiraj Venkatapathy and David Morrison of NASA Ames, was organized into three sessions: 1) Near-field wave generation by the impact; 2) Long distance wave propagation; 3) Damage from coastal run-up and inundation, and associated hazard. Workshop approaches were to compare simulations to understand differences in the results and gain confidence in the modeling for both formation and propagation of tsunami from asteroid impacts, and to use this information for preliminary global risk assessment. The workshop focus was on smaller asteroids (diameter less than 250m), which represent the most frequent impacts.

Asteroid↗
NASA NTRS1994

Minimizing systematic errors from atmospheric multiple scattering and satellite viewing geometry in coastal zone color scanner level IIA imagery

Water-leaving radiances and phytoplankton pigment concentrations are calculated from coastal zone color scanner (CZCS) radiance measurements by removing atmospheric Rayleigh and aerosol radiances from the total radiance signal measured at the satellite. The single greatest source of error in CZCS atmospheric correction algorithms in the assumption that these Rayleigh and aerosol radiances are separable. Multiple-scattering interactions between Rayleigh and aerosol components cause systematic errors in calculated aerosol radiances, and the magnitude of these errors is dependent on aerosol type and optical depth and on satellite viewing geometry. A technique was developed which extends the results of previous radiative transfer modeling by Gordon and Castano to predict the magnitude of these systematic errors for simulated CZCS orbital passes in which the ocean is viewed through a modeled, physically realistic atmosphere. The simulated image mathematically duplicates the exact satellite, Sun, and pixel locations of an actual CZCS image. Errors in the aerosol radiance at 443 nm are calculated for a range of aerosol optical depths. When pixels in the simulated image exceed an error threshhold, the corresponding pixels in the actual CZCS image are flagged and excluded from further analysis or from use in image compositing or compilation of pigment concentration databases. Studies based on time series analyses or compositing of CZCS imagery which do not address Rayleigh-aerosol multiple scattering should be interpreted cautiously, since the fundamental assumption used in their atmospheric correction algorithm is flawed.

Martin, D. L.↗
NASA NTRSDate not supplied

Merging Analytic Collaborative Frameworks with New Observing Strategies Toward a Digital Twin: Earth – Episodic Pulse Event Impacts on Ocean Carbon Cycle as an Example

Virtual representations of the Earth will allow us to address some of the most critical environmental issues of our time. Here, we show the first steps toward representation of riverine, estuarine, and coastal carbon processes to enable scenario driven “what-if” analyses of the carbon system and human footprint. Excess sediment and nutrient runoff from land-based human activities impact water quality and can pose serious threats to coastal and marine ecosystems. Episodic pulse events, such as extreme precipitation events, can increase the amount of nutrients entering estuaries and coastal regions, potentially leading to large phytoplankton blooms followed by anoxic conditions. Consequences of coastal runoff are predicted to increase with the higher intensity and frequency of extreme events. Beyond the threat to coastal ecosystems, recent findings suggest these episodic pulses might play a significant role for biological production influencing regional and global carbon fluxes and budgets. An improved understanding of these events through optimal, dynamic observing strategies will increase our knowledge of the land-ocean continuum and how regional events and nutrient fluxes affect the carbon cycle and ocean ecosystem. This conceptual framework enables focused science investigations by pairing data analytics and artificial intelligence tools (otherwise termed an Analytic Center Framework, ACF) with targeted measurement acquisition through distributed sensing and intelligent asset tasking (or New Observing Strategies, NOS). This NOS and ACF iterative approach acquires and integrates complementary and coincident satellite, in-situ and model data to build a more complete and in-depth picture of science phenomena. Specifically, Apache Science Data Analytic Platform (SDAP) is extended to incorporate relevant datasets for data access, harmonized analysis, and anomaly detection. When conditions are met for a likely pulse event, NASA’s D-SHIELD (Distributed Spacecraft with Heuristic Intelligence to Enable Logistical Decisions) tool is triggered to optimize asset overpass frequency and schedule observations for persistent monitoring. Targeted data is ingested by SDAP for enhanced investigation via iterative analysis until the trigger criteria is no longer met - steps toward a digital twin.

Laura Rogers↗
NASA NTRS1983

A comparative study on synthetic aperture radar and optical imagery of ocean waves

The ocean imaging capability of synthetic aperture radar (SAR) is examined in terms of an intercomparison between simultaneous, spatially collocated images of a coastal ocean scene, as recorded by aerial photography and aircraft-borne SAR. Based on a detailed study of these images, this paper examines various local features of oceanographic interest as they are imaged by the two methods. This provides information not available in the usual comparisons of normalized SAR and single point buoy spectra. In addition, aspects of the intensity wavenumber spectra of the two images are examined and discussed. An interesting and surprising conclusion arising from the comparison study is the ability of the SAR to image accurately non-uniform (possibly nonlinear) wave features which are imaged by the aerial photography. This result should have important implications on the development of SAR imaging models and the interpretation of the effect of ocean surface motion on the SAR images.

Banner, M. L.↗
NASA NTRS2004

Accurate Realization of GPS Vertical Global Reference Frame

The few millimeter per year level accuracy of radial global velocity estimates with the Global Positioning System (GPS) is at least an order of magnitude poorer than the accuracy of horizontal global motions. An improvement in the accuracy of radial global velocities would have a very positive impact on a number of geophysical studies of current general interest such as global sea-level and climate change, coastal hazards, glacial isostatic adjustment, atmospheric and oceanic loading, glaciology and ice mass variability, tectonic deformation and volcanic inflation, and geoid variability. The goal of this project is to improve our current understanding of GPS error sources associated with estimates of radial velocities at global scales. GPS error sources relevant to this project can be classified in two broad categories: (1) those related to the analysis of the GPS phase observable, and (2) those related to the combination of the positions and velocities of a set of globally distributed stations as determined from the analysis of GPS data important aspect in the first category include the effect on vertical rate estimates due to standard analysis choices, such as orbit modeling, network geometry, ambiguity resolution, as well as errors in models (or simply the lack of models) for clocks, multipath, phase-center variations, atmosphere, and solid-Earth tides. The second category includes the possible methods of combining and defining terrestrial reference flames for determining vertical velocities in a global scale. The latter has been the subject of our research activities during this reporting period.

Elosegui, Pedro↗
NASA NTRS2005

Elevation change (2000-2004) on the Malaspina Glacier, Alaska

The glaciers of the southeastern Alaska coastal region are the largest temperate glacier meltwater source on Earth and may contribute one third of the total glacier meltwater entering the global ocean. Since melt onset and refreeeze timing in this region show a tendency toward earlier onset and longer ablation seasons, accelerated glacier wastage may be occurring. In this study we focus on one of the largest temperate glacier systems on Earth, the Malaspina Glacier. This glacier, with a length of approximately 110 km and an area of approximately square 5,000 km, has the largest piedmont lobe of any temperate glacier. The entire lobe, which lies at elevations below 600 m, is within the ablation zone. We report and interpret ice elevation change between a digital elevation model (DEM) derived from the Shuttle Radar Topography Mission (SRTM C band) observations in Feb. 2000 and ICESat Laser 1-3 observations between Feb. 2003 and Nov. 2004. We use these elevation change results, along with earlier studies, to address the spatial and temporal variability in wastage of the piedmont lobe. Between 2000 and 2004 ice elevation changes of 10-30 meters occurred across the central Malaspina piedmont lobe. From 1972/73 (USGS DEM) to 1999 (SRTM corrected for estimated winter snow accumulation) Malaspina's (Agassiz, Seward Lobe, and Marvine) mean ice thinning was estimated at -47 m with maximum thinning on parts of the lobes to -160 m. The Malaspina's accumulation area is only slightly larger than its ablation area (2,575 km2 vs. 2,433 km2); unfortunately few glaciological observations are available from this source region. Snow accumulation rates have been largely inferred from low-altitude precipitation and temperature data. Comparing sequential ICESat observations in the Malaspina source region, we estimated short-term elevation increases of up to 5 meters during the winter of 2003/04.

Sauber, J.↗
NASA NTRS2021

Diagnosing Seasonal to Multi-decadal Phytoplankton Group Dynamics in a Highly Productive Coastal Ecosystem

The Santa Barbara Channel, CA (SBC) is a biodiverse marine ecosystem fueled largely by phytoplankton productivity, and the composition of the phytoplankton community influences the magnitude and fates of this productivity. Here, we create a 22-year monthly time series of phytoplankton biomarker pigment concentrations in the SBC by combining 12 years of high performance liquid chromatography phytoplankton pigment concentrations with bio-optical models and 10 additional years of bio-optical observations. The bio-optical models skillfully predict biomarker pigment concentrations representative of five distinct phytoplankton groups (PGs; diatoms, dinoflagellates, chlorophytes, prymnesiophytes, and picophytoplankton) and resolve seasonal responses to the annual upwelling-relaxation cycle for all PGs except the dinoflagellates. Our observations indicate that nanophytoplankton groups respond most rapidly to seasonal upwelling, followed by diatoms, and then by picophytoplankton as the water column stratifies in the summer. A Regional Ocean Modeling System (ROMS) solution is used to relate advection of different source waters to the observed PG dynamics. The ROMS simulation results suggest that, on seasonal time scales, pronounced cross-SBC differences in PG seasonality are related to cross-SBC differences in source waters. El Niño Southern Oscillation events drive interannual variability in the upwelling response of most PGs. On decadal time scales, dinoflagellate blooms are associated with the warm phase of the North Pacific Gyre Oscillation and anomalous advection of Southern California Bight source waters into the SBC. Taken together, our results provide a novel view of phytoplankton community succession in response to seasonal upwelling by considering the dynamics of pico- and nano-phytoplankton and suggest that regional surface ocean advection plays a substantial role in driving phytoplankton composition in the SBC.

Phytoplankton↗
NASA NTRS1994

Factors affecting the estimate of primary production from space

Remote sensing of primary production in the euphotic zone has been based mostly on visible-band and water-leaving radiance measured with the coastal zone color scanner. There are some robust, simple relationships for calculating integral production based on surface measurements, but they also require knowledge for photoadaptive parameters such as maximum photosynthesis which currently cannot be obtained from spave. A 17,000-station data set is used to show that space-based estimates of maximum photosynthesis could improve predictions of psi, the water column light utiliztion index, which is an important term in many primary productivity models. Temperature is also examined as a factor for predicting hydrographic structure and primary production. A simple model is used to relate temperature and maximum photosynthesis; the model incorporates (1) the positive relationship between maximum photosynthesis and temperature and (2) the strongly negative relationship between temperature and nitrate in the ocean (which directly affects maximum growth rates via nitrogen limitation). Since these two factors relate to carbon and nitrogen, 'balanced carbon/nitrogen assimilation' was calculated using the Redfield ratio, It is expected that the relationship between maximum balanced carbon assimilation versus temperature is concave-down, with the peak dependent on nitrate uptake kinetics, temperature-nitrate relationships,a nd the carbon chlorophyll ration. These predictions were compared with the sea truth data. The minimum turnover time for nitrate was also calculated using this approach. Lastly, sea surface temperature gradients were used to predict the slope of isotherms (a proxy for the slope of isopycnals in many waters). Sea truth data show that at size scales of several hundred kilometers, surface temperature gradients can provide information on the slope of isotherms in the top 200 m of the water column. This is directly relevant to the supply of nutrients into the surface mixed layer, which is useful for predicting integral biomass and primary production.

Balch, W. M.↗
NASA NTRS2003

Plumes and Blooms: Modeling the Case II Waters of the Santa Barbara Channel

The goal of the Plumes and Blooms (PnB) project is to develop, validate and apply to imagery state-of-the-art ocean color algorithms for quantifying sediment plumes and phytoplankton blooms for the Case II environment of the Santa Barbara Channel. We conduct monthly to twice-monthly transect observations across the Santa Barbara Channel to develop an algorithm development and product validation data set. The PnB field program started in the summer of 1996. At each of the 7 PnB stations, a complete verification bio-geo-optical data set is collected. Included are redundant measures of apparent optical properties (remote sensing reflectance and diffuse attenuation spectra), as well as in situ profiles of spectral absorption, beam attenuation and backscattering coefficients. Water samples are analyzed for component in vivo absorption spectra, fluorometric chlorophyll, phytoplankton pigment (by the SDSU CHORS laboratory), and inorganic nutrient concentrations. A primary goal is to use the PnB field data set to objectively tune semi-analytical models of ocean color for this site and apply them using available satellite imagery (SeaWiFS and MODIS). In support of this goal, we have also been addressing SeaWiFS ocean color and AVHRR SST imagery. We also are using the PnB data set to address time/space variability of water masses in the Santa Barbara Channel and its relationship to the 1997/1998 El Nino. However, the comparison between PnB field observations and satellite estimates of primary products has been disappointing. We find that field estimates of water-leaving radiance, L(sub wN)(lambda), correspond poorly to satellite estimates for both SeaWiFS and MODIS local area coverage imagery. We believe this is due to poor atmospheric correction due to complex mixtures of aerosol types found in these near-coastal regions. Last, we remain active in outreach activities.

Siegel, D. A.↗
NASA NTRS2005

NASA Supercomputer Improves Prospects for Ocean Climate Research

Estimates of ocean circulation constrained by in situ and remotely sensed observations have become routinely available during the past five years, and they are being applied to myriad scientific and operational problems [Stammer et al.,2002]. Under the Global Ocean Data Assimilation Experiment (GODAE), several regional and global estimates have evolved for applications in climate research, seasonal forecasting, naval operations, marine safety, fisheries,the offshore oil industry, coastal management, and other areas. This article reports on recent progress by one effort, the consortium for Estimating the Circulation and Climate of the Ocean (ECCO), toward a next-generation synthesis of ocean and sea-ice data that is global, that covers the full ocean depth, and that permits eddies.

Estimating the Circulation and Climate of the Ocea↗
NASA NTRS2003

Plumes and Blooms: Observations, Analysis and Modeling for SIMBIOS

The goal of the Plumes and Blooms (PnB) project is to develop, validate and apply to imagery state-of-theart ocean color algorithms for quantifying sediment plumes and phytoplankton blooms for the Case I1 environment of the Santa Barbara Channel. We conduct monthly to twice-monthly transect observations across the Santa Barbara Channel to develop an algorithm development and product validation data set. The PnB field program started in the summer of 1996. At each of the 7 PnB stations, a complete verification bio-geo-optical data set is collected. Included are redundant measures of apparent optical properties (remote sensing reflectance and diffuse attenuation spectra), as well as in situ profiles of spectral absorption, beam attenuation and backscattering coefficients. Water samples are analyzed for component in vivo absorption spectra, fluorometric chlorophyll, phytoplankton pigment (by the SDSU CHORS laboratory), and inorganic nutrient concentrations (Table 1). A primary goal is to use the PnB field data set to objectively tune semi-analytical models of ocean color for this site and apply them using available satellite imagery (SeaWiFS and MODIS). In support of this goal, we have also been addressing SeaWiFS ocean color and AVHRR SST imagery (Otero and Siegel, 2003). We also are using the PnB data set to address time/space variability of water masses in the Santa Barbara Channel and its relationship to the 1997/1998 El Niiio. However, the comparison between PnB field observations and satellite estimates of primary products has been disappointing. We find that field estimates of water-leaving radiance, LwN(h), correspond poorly to satellite estimates for both SeaWiFS and MODIS local area coverage imagery. We believe this is due to poor atmospheric correction due to complex mixtures of aerosol types found in these near-coastal regions. Last, we remain active in outreach activities.

Siegel, D. A.↗
NASA NTRS2019

Updated MISR Over-Water Research Aerosol Retrieval Algorithm - Part 2: A Multi-Angle Aerosol Retrieval Algorithm for Shallow, Turbid, Oligotrophic, and Eutrophic Waters

Coastal waters serve as transport pathways to the ocean for all agricultural and other runoff from terrestrial sources, and many are the sites for upwelling of nutrient rich, deep water; they are also some of the most biologically productive on Earth. Estimating the impact coastal waters have on the global carbon budget requires relating satellite-based remote-sensing retrievals of biological productivity (e.g., chlorophyll alpha concentration) to in situ measurements taken in near-surface waters. The Multi-angle Imaging SpectroRadiometer (MISR) can uniquely constrain the "atmospheric correction" needed to derive ocean color from remote-sensing imagers. Here, we retrieve aerosol amount and type from MISR over all types of water. The primary limitation is an upper bound on aerosol optical depth (AOD), as the algorithm must be able to distinguish the surface. This updated MISR research aerosol retrieval algorithm (RA) also assumes that light reflection by the underlying ocean surface is Lambertian. The RA computes the ocean surface reflectance (R (sub rs)) analytically for a given AOD, aerosol optical model, and wind speed. We provide retrieval examples over shallow, turbid, and eutrophic waters and introduce a productivity and turbidity index (PTI), calculated from retrieved spectral R (sub rs), that distinguished water types (similar to the the normalized difference vegetation index, NDVI, over land). We also validate the new algorithm by comparing spectral AOD and Angstrom exponent (ANG) results with 2419 collocated AErosol RObotic NETwork (AERONET) observations. For AERONET 558 nanometer-interpolated AOD less than 1.0, the root-mean square error (RMSE) is 0.04 and linear correlation coefficient is 0.95. For the 502 cloud-free MISR and AERONET collocations with an AERONET AOD greater than 0.20, the ANG RMSE is 0.25 and r is 0.89. Although MISR RA AOD retrieval quality does not appear to be substantially impacted by the presence of turbid water, the MISR-RA-retrieved Angstrom exponent seems to suffer from increased uncertainty under such conditions. MISR supplements current ocean color sources in regions where sunglint precludes retrievals from single-view-angle instruments. MISR atmospheric correction should also be more robust than that derived from single-view instruments such as the Moderate Resolution Imaging Spectroradiometer (MODIS). This is especially true in regions of shallow, turbid, and eutrophic waters, locations where biological productivity can be high, and single-view-angle retrieval algorithms struggle to separate atmospheric from oceanic features.

Satellite Remote Sensing↗
NASA NTRS2023

Sharks Associated With A Large Sand Shoal Complex: Community Insights From Longline and Acoustic Telemetry Surveys

Offshore sand shoals are a coveted sand source for coastal restoration projects and as sites for wind energy development. Shoals often support unique fish assemblages but their habitat value to sharks is largely unknown due to the high mobility of most species in the open ocean. This study pairs multi-year longline and acoustic telemetry surveys to reveal depth-related and seasonal patterns in a shark community associated with the largest sand shoal complex in east Florida, USA. Monthly longline sampling from 2012–2017 yielded 2,595 sharks from 16 species with Atlantic sharpnose (Rhizoprionodon terraenovae), blacknose (Carcharhinus acronotus), and blacktip (C. limbatus) sharks being the most abundant species. A contemporaneous acoustic telemetry array detected 567 sharks from 16 species (14 in common with longlines) tagged locally and by researchers elsewhere along the US East Coast and Bahamas. PERMANOVA modeling of both datasets indicate that the shark species assemblage differed more across seasons than water depth although both factors were important. Moreover, the shark assemblage detected at an active sand dredge site was similar to that at nearby undisturbed sites. Water temperature, water clarity, and distance from shore were habitat factors that most strongly correlated to community composition. Both sampling approaches documented similar single-species and community trends but longlines underestimated the shark nursery value of the region while telemetry-based community assessments are inherently biased by the number of species under active study. Overall, this study confirms that sharks can be an important component of sand shoal fish communities but suggests that deeper water immediately adjacent to shoals (as opposed to shallow shoal ridges) is more valuable to some species. Potential impacts to these nearby habitats should be considered when planning for sand extraction and offshore wind infrastructure.

Shark Management↗
NASA NTRS1985

Late-Quaternary climatic change on the American North Pacific Coast

The late Quaternary climate of the North Pacific, where according to modelling the solar radiation in the early Holocene at the time of the summer solstice is high and in the late Holocene is relatively low, is investigated. Quantitative temperature and precipitation estimates from southern Alaska are compared with estimates from western Washington and British Columbia. Data extending over more than 10,000 years show a broadly consistent pattern of climatic change in general agreement with predicted variations in solar radiation and their effect on atmospheric circulation and seasonal duration of pressure systems over the North Pacific Ocean. In the early Holocene, the subtropical North Pacific anticyclone annually regulated climate for a longer period at higher latitudes than at present, so that warmth and dryness increased in southern Alaska. The Aleutian low-pressure center intensified during the late Holocene, resulting in colder and more humid coastal climate and increased frequency of glacier growth in the cordillera.

Heusser, C. J.↗
NASA NTRS2001

Bio-Optical Measurement and Modeling of the California Current and Polar Oceans

This Sensor Intercomparison and Merger for Biological and Interdisciplinary Oceanic Studies (SIMBIOS) project contract supports in situ ocean optical observations in the California Current, Southern Ocean, Indian Ocean as well as merger of other in situ data sets we have collected on various global cruises supported by separate grants or contracts. The principal goals of our research are to validate standard or experimental products through detailed bio-optical and biogeochemical measurements, and to combine ocean optical observations with advanced radiative transfer modeling to contribute to satellite vicarious radiometric calibration and advanced algorithm development. In collaboration with major oceanographic ship-based observation programs funded by various agencies (CalCOFI, US JGOFS, NOAA AMLR, INDOEX and Japan/East Sea) our SIMBIOS effort has resulted in data from diverse bio-optical provinces. For these global deployments we generate a high-quality, methodologically consistent, data set encompassing a wide-range of oceanic conditions. Global data collected in recent years have been integrated with our on-going CalCOFI database and have been used to evaluate Sea-Viewing Wide Field-of-view Sensor (SeaWiFS) algorithms and to carry out validation studies. The combined database we have assembled now comprises more than 700 stations and includes observations for the clearest oligotrophic waters, highly eutrophic blooms, red-tides and coastal case two conditions. The data has been used to validate water-leaving radiance estimated with SeaWiFS as well as bio optical algorithms for chlorophyll pigments. The comprehensive data is utilized for development of experimental algorithms (e.g., high-low latitude pigment transition, phytoplankton absorption, and cDOM).

Mitchell, B. Greg↗
NASA NTRS2016

Automated Segmentation and Classification of Coral using Fluid Lensing from Unmanned Airborne Platforms

In recent years, there has been a growing interest among biologists in monitoring the short and long term health of the world's coral reefs. The environmental impact of climate change poses a growing threat to these biologically diverse and fragile ecosystems, prompting scientists to use remote sensing platforms and computer vision algorithms to analyze shallow marine systems. In this study, we present a novel method for performing coral segmentation and classification from aerial data collected from small unmanned aerial vehicles (sUAV). Our method uses Fluid Lensing algorithms to remove and exploit strong optical distortions created along the air-fluid boundary to produce cm-scale resolution imagery of the ocean floor at depths up to 5 meters. A 3D model of the reef is reconstructed using structure from motion (SFM) algorithms, and the associated depth information is combined with multidimensional maximum a posteriori (MAP) estimation to separate organic from inorganic material and classify coral morphologies in the Fluid-Lensed transects. In this study, MAP estimation is performed using a set of manually classified 100 x 100 pixel training images to determine the most probable coral classification within an interrogated region of interest. Aerial footage of a coral reef was captured off the coast of American Samoa and used to test our proposed method. 90 x 20 meter transects of the Samoan coastline undergo automated classification and are manually segmented by a marine biologist for comparison, leading to success rates as high as 85%. This method has broad applications for coastal remote sensing, and will provide marine biologists access to large swaths of high resolution, segmented coral imagery.

algorithms segments classifications↗