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Search indexed NASA NTRS and DOE OSTI research on propulsion, heat transfer, battery materials and energy systems. Follow report and document links to the original sources.

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At least 199 records · Page 11

Genetics of adaptation in modern chicken

We carried out whole genome resequencing of 127 chicken including red jungle fowl and multiple populations of commercial broilers and layers to perform a systematic screening of adaptive changes in modern chicken ( Gallus gallus domesticus ). We uncovered >21 million high quality SNPs of which 34% are newly detected variants. This panel comprises >115,000 predicted amino-acid altering substitutions as well as 1,100 SNPs predicted to be stop-gain or -loss, several of which reach high frequencies. Signatures of selection were investigated both through analyses of fixation and differentiation to reveal selective sweeps that may have had prominent roles during domestication and breed development. Contrasting wild and domestic chicken we confirmed selection at the BCO2 and TSHR loci and identified 34 putative sweeps co-localized with ALX1 , KITLG , EPGR , IGF1 , DLK1 , JPT2 , CRAMP1 , and GLI3 , among others. Analysis of enrichment between groups of wild vs. commercials and broilers vs. layers revealed a further panel of candidate genes including CORIN , SKIV2L2 implicated in pigmentation and LEPR , MEGF10 and SPEF2 , suggestive of production-oriented selection. SNPs with marked allele frequency differences between wild and domestic chicken showed a highly significant deficiency in the proportion of amino-acid altering mutations (P<2.5×10 -6 ). The results contribute to the understanding of major genetic changes that took place during the evolution of modern chickens and in poultry breeding.

60 APPLIED LIFE SCIENCES↗

Selection Signatures Underlying Dramatic Male Inflorescence Transformation During Modern Hybrid Maize Breeding

Inflorescence capacity plays a crucial role in reproductive fitness in plants, and in production of hybrid crops. Maize is a monoecious species bearing separate male and female flowers (tassel and ear, respectively). The switch from open-pollinated populations of maize to hybrid-based breeding schemes in the early 20th century was accompanied by a dramatic reduction in tassel size, and the trend has continued with modern breeding over the recent decades. The goal of this study was to identify selection signatures in genes that may underlie this dramatic transformation. Using a population of 942 diverse inbred maize accessions and a nested association mapping population comprising three 200-line biparental populations, we measured 15 tassel morphological characteristics by manual and image-based methods. Genome-wide association studies identified 242 single nucleotide polymorphisms significantly associated with measured traits. We compared 41 unselected lines from the Iowa Stiff Stalk Synthetic (BSSS) population to 21 highly selected lines developed by modern commercial breeding programs, and found that tassel size and weight were reduced significantly. We assayed genetic differences between the two groups using three selection statistics: cross population extended haplotype homozogysity, cross-population composite likelihood ratio, and fixation index. All three statistics show evidence of selection at genomic regions associated with tassel morphology relative to genome-wide null distributions. These results support the tremendous effect, both phenotypic and genotypic, that selection has had on maize male inflorescence morphology.

59 BASIC BIOLOGICAL SCIENCES↗

Modernization Plans for Fermilab’s Accelerator Control System

The control system, ACNET, for Fermilab’s accelerator complex has enabled the lab’s scientific mission for decades. ACNET has evolved over the years to incorporate new technologies. However, as Fermilab prepares to enter a new era with its PIP-II superconducting linear accelerator, ACNET is at a crossroads. There are several components that are either obsolete or outdated, or certainly will be over the long lifetime of PIP-II. We have begun a plan to modernize our accelerator control system. This paper discusses some of the obsolete hardware and software that needs to be replaced, and lays out options and technologies that we might adopt as part of this modernization effort.

43 PARTICLE ACCELERATORS↗

US NDC Modernization Iteration E1 Prototyping Report: Common Object Interface

During the first iteration of the US NDC Modernization Elaboration phase (E1), the SNL US NDC modernization project team completed an initial survey of applicable COTS solutions, and established exploratory prototyping related to the Common Object Interface (COI) in support of system architecture definition. This report summarizes these activities and discusses planned follow-on work.

97 MATHEMATICS AND COMPUTING↗

US NDC Modernization Iteration E1 Prototyping Report: Processing Control Framework

During the first iteration of the US NDC Modernization Elaboration phase (E1), the SNL US NDC modernization project team developed an initial survey of applicable COTS solutions, and established exploratory prototyping related to the processing control framework in support of system architecture definition. This report summarizes these activities and discusses planned follow-on work.

97 MATHEMATICS AND COMPUTING↗

US NDC Modernization Iteration E2 Prototyping Report: OSD & PC Software Infrastructure

During the second iteration of the US NDC Modernization Elaboration phase (E2), the SNL US NDC Modernization project team completed follow-on COTS surveys & exploratory prototyping related to the Object Storage & Distribution (OSD) mechanism, and the processing control software infrastructure. This report summarizes the E2 prototyping work.

97 MATHEMATICS AND COMPUTING↗

US NDC Modernization Iteration E2 Prototyping Report: User Interface Framework

During the second iteration of the US NDC Modernization Elaboration phase (E2), the SNL US NDC Modernization project team completed follow-on Rich Client Platform (RCP) exploratory prototyping related to the User Interface Framework (UIF). The team also developed a survey of browser-based User Interface solutions and completed exploratory prototyping for selected solutions. This report presents the results of the browser-based UI survey, summarizes the E2 browser-based UI and RCP prototyping work, and outlines a path forward for the third iteration of the Elaboration phase (E3).

97 MATHEMATICS AND COMPUTING↗

US NDC Modernization Iteration E1 Prototyping Report: User Interface Framework

During the first iteration of the US NDC Modernization Elaboration phase (E1), the SNL US NDC modernization project team completed an initial survey of applicable COTS solutions, and established exploratory prototyping related to the User Interface Framework (UIF) in support of system architecture definition. This report summarizes these activities and discusses planned follow-on work.

97 MATHEMATICS AND COMPUTING↗

Milestone Report - Level-2 Milestone 5589: Modernization and Expansion of LLNL Archive Disk Cache

This report documents Livermore Computing (LC) activities in support of ASC L2 milestone 5589: Modernization and Expansion of LLNL Archive Disk Cache, due March 31, 2016. The full text of the milestone is included in Attachment 1. The description of the milestone is: Description: Configuration of archival disk cache systems will be modernized to reduce fragmentation, and new, higher capacity disk subsystems will be deployed. This will enhance archival disk cache capability for ASC archive users, enabling files written to the archives to remain resident on disk for many (6–12) months, regardless of file size. The milestone was completed in three phases. On August 26, 2015 subsystems with 6PB of disk cache were deployed for production use in LLNL’s unclassified HPSS environment. Following that, on September 23, 2015 subsystems with 9 PB of disk cache were deployed for production use in LLNL’s classified HPSS environment. On January 31, 2016, the milestone was fully satisfied when the legacy Data Direct Networks (DDN) archive disk cache subsystems were fully retired from production use in both LLNL’s unclassified and classified HPSS environments, and only the newly deployed systems were in use.

97 MATHEMATICS AND COMPUTING↗

First-of-A-Kind Control Room Modernization Project Plan

This project plan describes a comprehensive approach to the design of an end-state concept for a modernized control room for Palo Verde. It describes the collaboration arrangement between the DOE LWRS Program Control Room Modernization Project and the APS Palo Verde Nuclear Generating Station. It further describes the role of other collaborators, including the Institute for Energy Technology (IFE) and the Electric Power Research Institute (EPRI). It combines advanced tools, methodologies, and facilities to enable a science-based approach to the validation of applicable engineering and human factors principles for nuclear plant control rooms. It addresses the required project results and documentation to demonstrate compliance with regulatory requirements. It describes the project tasks that will be conducted in the project, and the deliverable reports that will be developed through these tasks. This project plan will be updated as new tasks are added and as project milestones are completed. It will serve as an ongoing description on the project both for project participants and for industry stakeholders.

21 SPECIFIC NUCLEAR REACTORS AND ASSOCIATED PLANTS↗

The Capability Portfolio Analysis Tool (CPAT): A Mixed Integer Linear Programming Formulation for Fleet Modernization Analysis (Version 2.0.2).

In order to effectively plan the management and modernization of their large and diverse fleets of vehicles, Program Executive Office Ground Combat Systems (PEO GCS) and Program Executive Office Combat Support and Combat Service Support (PEO CS&CSS) commis- sioned the development of a large-scale portfolio planning optimization tool. This software, the Capability Portfolio Analysis Tool (CPAT), creates a detailed schedule that optimally prioritizes the modernization or replacement of vehicles within the fleet - respecting numerous business rules associated with fleet structure, budgets, industrial base, research and testing, etc., while maximizing overall fleet performance through time. This paper contains a thor- ough documentation of the terminology, parameters, variables, and constraints that comprise the fleet management mixed integer linear programming (MILP) mathematical formulation. This paper, which is an update to the original CPAT formulation document published in 2015 (SAND2015-3487), covers the formulation of important new CPAT features.

97 MATHEMATICS AND COMPUTING↗

Regulatory Risk Reduction for Advanced Reactor Technologies: FY 2017 Framework Modernization Proposals and Status

The regulatory framework governing the licensing of commercial nuclear power plants in the U.S. developed over recent decades with a strong emphasis towards assessing large light water reactor (LWR) safety. However, recent shifts in energy market needs and priorities has brought new and different types of nuclear technologies into consideration for applications that include but are not limited to electric power generation. In order to realize the benefits in efficiency, reliability and safety that advanced (non-LWR) can potentially offer, efforts are needed to modernize the existing regulatory framework to make technical licensing requirements more compatible with radically new nuclear technologies. To serve the needs of the energy market, this update should be performed on a schedule conducive to deployments projected to begin as early as 2025. Beginning in 2016, an initiative was launched to amend the U.S. nuclear power reactor licensing framework by making the technical requirements contained therein more generically compatible with non LWR technology. The Licensing Modernization Project (LMP) was established as an industry-led team of subject matter experts managed by Southern Company Services and supported through a cost sharing arrangement with the U.S. Department of Energy (DOE). Technical and programmatic coordination for the effort was also provided by the Nuclear Energy Institute (NEI), the Licensing Department of the Advanced Reactor Technologies (ART) Program located at the Idaho National Laboratory (INL), and others.

42 ENGINEERING↗

Models and methods for assessing the value of HVDC and MVDC technologies in modern power grids

This report reflects the results of U.S. Department of Energy’s (DOE) Grid Modernization project 0074 “Models and methods for assessing the value of HVDC [high-voltage direct current] and MTDC [multi-terminal direct current] technologies in modern power grids.” The work was done by the Pacific Northwest National Laboratory (PNNL) and Oak Ridge National Laboratory (ORNL) in cooperation with Mid-Continent Independent System Operator (MISO) and Siemens. The main motivation of this study was to show the benefit of using direct current (DC) systems larger than those in existence today as they overlap with the alternating current (AC) systems. Proper use of their flexibility in terms of active/reactive power control and fast response can provide much-needed services to the grid at the same time as moving large blocks of energy to take advantage of cost diversity. Ultimately, the project’s success will enable decision-makers and investors to make well-informed decisions regarding this use of DC systems. This project showed the technical feasibility of HVDC macrogrid for frequency control and congestion relief in addition to bulk power transfers. Industry-established models for commonly used technologies were employed, along with high-fidelity models for recently developed HVDC converter technologies; like the modular multilevel converters (MMCs), a voltage source converters (VSC). Models for General Electric Positive Sequence Load Flow (GE PSLF) and Siemens Power System Simulator (PSS/E), widely used analysis programs, were for the first time adapted to include at the same time both Western Electricity Coordinating Council (WECC) and Eastern Interconnection (EI), the two largest North American interconnections. The high-fidelity models and their control were developed in detail for MMC system and extended to HVDC systems in point-to-point and in three-node multi-terminal configurations. Using a continental-level mixed AC-DC grid model, and using a HVDC macrogrid power flow and transient stability model, the results showed that the HVDC macrogrid relieved congestion and mitigated loop flows in AC networks, and provided up to 24% improvement in frequency responses. These are realistic studies, based on the 2025 heavy summer and EI multi-regional modeling working group (MMWG) 2026 summer peak cases. This work developed high-fidelity models and simulation algorithms to understand the dynamics of MMC. The developed models and simulation algorithms are up to 25 times faster than the existing algorithms. Models and control algorithms for high-fidelity models were designed and tested for point-to-point and multi-terminal configurations. The multi-terminal configuration was tested connecting simplified models of EI, WI, and Electric Reliability Council of Texas (ERCOT). The developed models showed up to 45% improvement in frequency response with the connection of all the three asynchronous interconnections in the United States using fast and advanced DC technologies like the multi-terminal MMC-DC system. Future work will look into developing high-fidelity models of other advanced DC technologies, combining high-fidelity models with the continental-level model, incorporating additional services. More scenarios involving large-scale HVDC and MTDC will be evaluated.

24 POWER TRANSMISSION AND DISTRIBUTION↗

Classification of Methane Emissions from Industrial Meters, Vintage vs Modern Plastic Pipe, and Plastic-lined Steel and Cast-Iron Pipe (Final Report)

The project focus was to improve the characterization of methane (CH 4 ) emissions currently detailed in the U.S. Environmental Protection Agency (EPA) Greenhouse Gas Inventory (GHGI) for categories of assets within the Natural Gas (NG) distribution system to isolate what is driving inflation or deflation behind current, nationwide, aggregated Emission Factors (EFs). These specific categories included industrial/commercial NG customer meters, modern and vintage plastic pipe, along with plastic-lined steel and cast-iron pipe. CH 4 emission rate data was gathered during 25 sampling campaigns at industrial/commercial meter sites, vintage and modern plastic pipe sites, as well as plastic-lined steel and cast-iron sites located within NG distribution networks.

03 NATURAL GAS↗

US NDC Modernization Project Expert Review Panel Report

AFTAC and the SNL US NDC modernization project team hosted a two-day expert review panel meeting September 30th & October 1st, 2014 to solicit input from subject matter experts regarding the technical direction and current design concepts proposed for the modernized US NDC system. This report documents the panel’s recommendations captured during the review.

97 MATHEMATICS AND COMPUTING↗

The Capability Portfolio Analysis Tool (CPAT): A Mixed Integer Linear Programming Formulation for Fleet Modernization Analysis.

In order to effectively plan the management and modernization of its large and diverse fleet of vehicles, the Program Executive Office Ground Combat Systems (PEO GCS) commissioned the development of a large-scale portfolio planning optimization tool. This software, the Capability Portfolio Analysis Tool (CPAT), creates a detailed schedule that optimally prioritizes the modernization or replacement of vehicles within the fleet - respecting numerous business rules associated with fleet structure, budgets, industrial base, research and testing, etc., while maximizing overall fleet performance through time. This paper contains a thorough documentation of the terminology, parameters, variables, and constraints that comprise the fleet management mixed integer linear programming (MILP) mathematical formulation.

32 ENERGY CONSERVATION, CONSUMPTION, AND UTILIZATI↗

Strategy for Modernizing a 40-Year-Old Accelerator Control System

Modernizing the Fermilab accelerator control system is essential to future operations of the laboratory's accelerator complex. The existing control system has evolved over four decades and uses hardware that is no longer available and software that uses obsolete frameworks. The Accelerator Controls Operations Research Network (ACORN) Project will modernize the control system and replace end-of-life power supplies to enable future accelerator complex operations with megawatt particle beams. The project team is evaluating three design concepts, and the future deployment of artificial intelligence capabilities for accelerator operations is an important consideration. An overview of the ACORN Project will be presented, including R&D used for evaluating the conceptual designs in the context of requirements for future accelerator operations.

43 PARTICLE ACCELERATORS↗

NCSP Analytical Methods Subtask 3, AMPX Development and Maintenance, and NCSP Nuclear Data Subtask 6, SAMMY Modernization

The modernization of SAMMY continued with the removal of all container array access for the main program. The container array was used due to the computer limitations at the time of the initial writing of SAMMY, but it prevented the use of some modern code testing options. Additionally, the authors continued to make the code more modular by shifting the storage of the energy grid and the covariance information to C++ storage, thus allowing for better unit testing and the elimination of scratch files. For AMPX, the authors continued to implement the new Evaluated Nuclear Data File format to allow AMPX to read new evaluations as they become available.

73 NUCLEAR PHYSICS AND RADIATION PHYSICS↗