Soil carbon dynamics during drying vs. rewetting: Importance of antecedent moisture conditions
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Patel, Kaizad F. (ORCID:0000000164377809)↗
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Uncertainty in Land-Use Adaptation Persists Despite Crop Model Projections Showing Lower Impacts Under High Warming
Climate change is expected to impact crop yields and alter resource availability. However, the understanding of the potential of agricultural land-use adaptation and its costs under climate warming is limited. Here, we use a global land system model to assess land-use-based adaptation and its cost under a set of crop model projections, including CO2 fertilization, based on climate model outputs. In our simulations of a low-emissions scenario, the land system responds through slight changes in cropland area in 2100, with costs close to zero. For a high emissions scenario and impacts uncertainty, the response tends toward cropland area changes and investments in technology, with average adaptation costs between −1.5 and +19 US$05 per ton of dry matter per year. Land-use adaptation can reduce adverse climate effects and use favorable changes, like local gains in crop yields. However, variance among high-emissions impact projections creates challenges for effective adaptation planning.
Agriculture↗
Terrestrial carbon balance in a drier world: the effects of water availability in southwestern North America
Abstract Global modeling efforts indicate semiarid regions dominate the increasing trend and interannual variation of net CO 2 exchange with the atmosphere, mainly driven by water availability. Many semiarid regions are expected to undergo climatic drying, but the impacts on net CO 2 exchange are poorly understood due to limited semiarid flux observations. Here we evaluated 121 site‐years of annual eddy covariance measurements of net and gross CO 2 exchange (photosynthesis and respiration), precipitation, and evapotranspiration ( ET ) in 21 semiarid North American ecosystems with an observed range of 100 – 1000 mm in annual precipitation and records of 4–9 years each. In addition to evaluating spatial relationships among CO 2 and water fluxes across sites, we separately quantified site‐level temporal relationships, representing sensitivity to interannual variation. Across the climatic and ecological gradient, photosynthesis showed a saturating spatial relationship to precipitation, whereas the photosynthesis– ET relationship was linear, suggesting ET was a better proxy for water available to drive CO 2 exchanges after hydrologic losses. Both photosynthesis and respiration showed similar site‐level sensitivity to interannual changes in ET among the 21 ecosystems. Furthermore, these temporal relationships were not different from the spatial relationships of long‐term mean CO 2 exchanges with climatic ET . Consequently, a hypothetical 100‐mm change in ET , whether short term or long term, was predicted to alter net ecosystem production ( NEP ) by 64 gC m −2 yr −1 . Most of the unexplained NEP variability was related to persistent, site‐specific function, suggesting prioritization of research on slow‐changing controls. Common temporal and spatial sensitivity to water availability increases our confidence that site‐level responses to interannual weather can be extrapolated for prediction of CO 2 exchanges over decadal and longer timescales relevant to societal response to climate change.
Biederman, Joel A.↗
Accumulation of persistent tungsten in bone as in situ generated polytungstate
Tungsten accumulates in bone but is neither labile nor inert once absorbed. Tungsten’s relatively high cytosolic solubility and availability are problematic given its association with childhood lymphocytic leukemia. In light of tungsten’s technological prevalence, and the increased concern of regulatory agencies, here we characterize the chemical form and localization in mice exposed to tungsten through drinking water. Using X-ray fluorescence spectroscopy, we report accumulation of tungsten in bone tissue with some sites having ~10-fold greater intensities than background levels. The long bone tissue studied includes cortical, cancellous and bone marrow. Persistence of tungsten in cortical bone tissue following removal of the source indicates that it is retained in an insoluble form. The X-ray absorption near-edge structure spectra for tungsten in these tissues indicate that it is no longer in the originally administered form, orthotungstate, but rather resembles the heteropolytungsate species, phosphotungstate.
60 APPLIED LIFE SCIENCES↗
Roadmap for transforming heterogeneous catalysis with artificial intelligence
Artificial intelligence (AI) is poised to transform heterogeneous catalysis, opening avenues for catalytic materials discovery. By uncovering intricate patterns in high-dimensional data, AI has been reshaping our pursuit of sustainable catalytic processes across the energy, environmental and chemical sectors. This promise, however, hinges on overcoming fundamental barriers, including limitations in data availability and quality, challenges in the generalizability and interpretability of data-augmented decisions, and the persistent gap between in silico predictions and experiments. Furthermore, we outline a forward-looking roadmap for deeply integrating AI into heterogeneous catalysis with an AI-ready data ecosystem, multimodal foundation models, and ultimately autonomous laboratories to accelerate the development of next-generation catalytic technologies via AI-empowered human–machine collaboration.
Computational methods↗
Fitness factors impacting survival of a subsurface bacterium in contaminated groundwater
Many factors contribute to the ability of a microbial species to persist when encountering complexly contaminated environments, including time of exposure, the nature and concentration of contaminants, availability of nutritional resources, and possession of a combination of appropriate molecular mechanisms needed for survival. Herein we sought to identify genes that are most important for survival of Gram-negative Enterobacteriaceae in contaminated groundwater environments containing high concentrations of nitrate and metals using the metal-tolerant Oak Ridge Reservation isolate, Pantoea sp. MT58 (MT58). Survival fitness experiments in which a randomly barcoded transposon insertion (RB-TnSeq) library of MT58 was exposed directly to contaminated Oak Ridge Reservation groundwater samples from across a nitrate and mixed metal contamination plume were used to identify genes important for survival with increasing exposure times and concentrations of contaminants, and availability of a carbon source. Genes involved in controlling and using carbon, encoding transcriptional regulators, and related to Gram-negative outer membrane processes were among those found to be important for survival in contaminated Oak Ridge Reservation groundwater. A comparative genomics analysis of 75 Pantoea genus strains allowed us to further separate the survival determinants into core and non-core genes in the Pantoea pangenome, revealing insights into the survival of subsurface microorganisms during contaminant plume intrusion.
59 BASIC BIOLOGICAL SCIENCES↗
Restoration of Geographically Isolated Wetlands: An Amphibian-Centric Review of Methods and Effectiveness
Geographically isolated wetlands provide a critical habitat for pond-breeding amphibians, a taxa of broad conservation concern. Global wetland loss and degradation has made restoration essential for amphibian conservation. Restoration goals typically include recovering the wetlands’ physiochemical, hydrological, and ecological functions. However, for pond-breeding amphibians, successful restoration should also result in sustained populations, which is difficult to assess and infrequently reported. In this paper, we review the available evidence that restoration of geographically isolated wetlands promotes pond-breeding amphibian occupancy and population persistence. We provide an overview of restoration practices addressing hydrology, vegetation, and ecological processes within these unique environments and across spatial scales. We then summarize the evidence, and discuss the limitations, for evaluating successful restoration within the context of amphibian conservation across these categories. Finally, we provide recommendations for researchers and practitioners to leverage prior successes and establish systematic data collection and dissemination. Moving restoration of wetlands for amphibian conservation forward will require more robust data collection and reporting.
59 BASIC BIOLOGICAL SCIENCES↗
Grid Technology as a Cyberinfrastructure for Delivering High-End Services to the Earth and Space Science Community
Grid technology consists of middleware that permits distributed computations, data and sensors to be seamlessly integrated into a secure, single-sign-on processing environment. In &is environment, a user has to identify and authenticate himself once to the grid middleware, and then can utilize any of the distributed resources to which he has been,panted access. Grid technology allows resources that exist in enterprises that are under different administrative control to be securely integrated into a single processing environment The grid community has adopted commercial web services technology as a means for implementing persistent, re-usable grid services that sit on top of the basic distributed processing environment that grids provide. These grid services can then form building blocks for even more complex grid services. Each grid service is characterized using the Web Service Description Language, which provides a description of the interface and how other applications can access it. The emerging Semantic grid work seeks to associates sufficient semantic information with each grid service such that applications wii1 he able to automatically select, compose and if necessary substitute available equivalent services in order to assemble collections of services that are most appropriate for a particular application. Grid technology has been used to provide limited support to various Earth and space science applications. Looking to the future, this emerging grid service technology can provide a cyberinfrastructures for both the Earth and space science communities. Groups within these communities could transform those applications that have community-wide applicability into persistent grid services that are made widely available to their respective communities. In concert with grid-enabled data archives, users could easily create complex workflows that extract desired data from one or more archives and process it though an appropriate set of widely distributed grid services discovered using semantic grid technology. As required, high-end computational resources could be drawn from available grid resource pools. Using grid technology, this confluence of data, services and computational resources could easily be harnessed to transform data from many different sources into a desired product that is delivered to a user's workstation or to a web portal though which it could be accessed by its intended audience.
Hinke, Thomas H.↗
Envisioning urban environments resilient to vector-borne diseases: a protocol to study dengue in Vietnam
Transmitted primarily by Aedes aegypti (Ae. aegypti) and Aedes albopictus (Ae. albopictus), arboviral diseases pose a major global public health threat. Dengue, chikungunya, and zika are increasingly prevalent in Southeast Asia. Among other arboviruses, dengue and zika are becoming more common in Central and South America. Given human encroachment into previously uninhabited, often deforested areas, to provide new housing in regions of population expansion, conceptualizing built urban environments in a novel way is urgently needed to safeguard against the growing climate change-driven threat of vector-borne diseases. By understanding the spread from a One Health perspective, enhanced control and prevention can be achieved. This is particularly important considering that climate change is likely to significantly impact the persistence of ponded water where mosquitoes breed due to increasing temperature and shifting rainfall patterns with regard to magnitude, duration, frequency, and season. Models can incorporate aquatic mosquito stages and adult spatial dynamics when habitats are heterogeneously available, thereby including dispersal and susceptible-exposed-infected-recovered (SEIR) epidemiology. Coupled with human population distribution (density, locations), atmospheric conditions (air temperature, precipitation), and hydrological conditions (soil moisture distribution, ponding persistence in topographic depressions), modeling has improved predictive ability for infection rates. However, it has not informed interventional approaches from an urban environment perspective which considers the role of ponds/lakes that support green spaces, the density of population that enables rapid spread of disease, and varying micro-habitats for various mosquito stages under climate change. Here, for an example of dengue in Vietnam, a preventive and predictive approach to design resilient urban environments is proposed, which uses data from rapidly expanding metropolitan communities to learn continually. This protocol deploys computational approaches including simulation and machine learning/artificial intelligence, underpinned by surveillance and medical data for validation and adaptive learning. Its application may best inform urban planning in low-middle income countries in tropical zones where arboviral pathogens are prevalent.
60 APPLIED LIFE SCIENCES↗
Mentat/A: Medium grain parallel processing
The objective of this project is to support the Algorithm to Architecture Mapping Model (ATAMM) firing rules using the Mentat run-time system and the Mentat Programming Language (MPL). Specifically, this required changes to (1) modify the run-time system to control queue length and inhibit actor firing until required data tokens are available and space is available in the input queues of all of the direct descendent actors, (2) disallow the specification of persistent object classes in the MPL, and (3) permit only decision free graphs in the MPL. We have been successful in implementing the spirit of the plan, although some goals changed as we came to better understand the problem. Here, we report on what we accomplished and the lessons we learned. The Mentat/A runtime system, the compiler, results for three applications, and a summary and some observations are given. Appendix A contains a list of technical reports and published papers partially supported by the grant. Appendix B contains listings for the three applications.
Grimshaw, Andrew S.↗
Mentat/A: Medium grain parallel processing
The objective of this project is to test the Algorithm to Architecture Mapping Model (ATAMM) firing rules using the Mentat run-time system and the Mentat Programming Language (MPL). A special version of Mentat, Mentat/A (Mentat/ATAMM) was constructed. This required changes to: (1) modify the run-time system to control queue length and inhibit actor firing until required data tokens are available and space is available in the input queues of all of the direct descendent actors; (2) disallow the specification of persistent object classes in the MPL; and (3) permit only decision free graphs in the MPL. We were successful in implementing the spirit of the plan, although some goals changed as we came to better understand the problem. We report on what we accomplished and the lessons we learned. The Mentat/A run-time system is discussed, and we briefly present the compiler. We present results for three applications and conclude with a summary and some observations. Appendix A contains a list of technical reports and published papers partially supported by the grant. Appendix B contains listings for the three applications.
Grimshaw, Andrew S.↗
Global Precipitation at Your Fingertips, Part I: Data
The most accurate satellite estimates come from the first precipitation radar (PR) to fly in space, aboard the Tropical Rainfall Measuring Mission (TRMM) satellite. Although important for research, the PR's coverage is too limited to give routine monitoring of global precipitation. Rather, we depend on observations of the Earth system's natural emission of microwave energy. Even these data are not available at all times since the satellites on which the microwave sensors fly are in "low Earth orbit", or LEO, some 400-800 km above the surface. Such LEO satellites pass over any given spot on Earth twice a day. In contrast, "geosynchronous Earth orbit", or GEO, satellites at an altitude of about 35,000 km orbit at the same speed that the Earth revolves and therefore always view the same part of the surface. The trade-off is that GEO sensors provide less-precise estimates computed from the Earth system's natural emissions of infrared (IR) energy. Other satellite datasets are used to provide estimates in regions where both microwave and IR have difficulty, such as polar regions or times before mid-1987 when microwave data became available. Finally, rain gauge data where available, have proved to be valuable for helping to reduce biases in the satellite data, which are persistent differences between the satellite estimate and the precipitation that actually occurred. The datasets discussed below take slightly different approaches to mixing and matching the various kinds of input data to create global estimates of precipitation that answer different needs and/or take advantage of different input data. Each is produced at the NASA Goddard Space Flight Center, in Greenbelt, Maryland, USA. [Other combination datasets are produced at other data centers.]
Huffman, George J.↗
Integrating Gridded NASA Hydrological Data into CUAHSI HIS
The amount of hydrological data available from NASA remote sensing and modeling systems is vast and ever-increasing;but, one challenge persists:increasing the usefulness of these data for, and thus their use by, end user communities. The Hydrology Data and Information Services Center (HDISC), part of the Goddard Earth Sciences DISC, has continually worked to better understand the hydrological data needs of different end users, to thus better able to bridge the gap between NASA data and end user communities. One effective strategy is integrating the data in to end user community tools and environments. There is an ongoing collaborative effort between NASA HDISC, NASA Hydrological Sciences Branch, and CUAHSI to integrate NASA gridded hydrology data in to the CUAHSI Hydrologic Information System (HIS).
Rui, Hualan↗
Bioavailable iron titrations reveal oceanic Synechococcus ecotypes optimized for different iron availabilities
Abstract The trace metal iron (Fe) controls the diversity and activity of phytoplankton across the surface oceans, a paradigm established through decades of in situ and mesocosm experimental studies. Despite widespread Fe-limitation within high-nutrient, low chlorophyll (HNLC) waters, significant contributions of the cyanobacterium Synechococcus to the phytoplankton stock can be found. Correlations among differing strains of Synechococcus across different Fe-regimes have suggested the existence of Fe-adapted ecotypes. However, experimental evidence of high- versus low-Fe adapted strains of Synechococcus is lacking, and so we investigated the transcriptional responses of microbial communities inhabiting the HNLC, sub-Antarctic region of the Southern Ocean during the Spring of 2018. Analysis of metatranscriptomes generated from on-deck incubation experiments reflecting a gradient of Fe-availabilities reveal transcriptomic signatures indicative of co-occurring Synechococcus ecotypes adapted to differing Fe-regimes. Functional analyses comparing low-Fe and high-Fe conditions point to various Fe-acquisition mechanisms that may allow persistence of low-Fe adapted Synechococcus under Fe-limitation. Comparison of in situ surface conditions to the Fe-titrations indicate ecological relevance of these mechanisms as well as persistence of both putative ecotypes within this region. This Fe-titration approach, combined with transcriptomics, highlights the short-term responses of the in situ phytoplankton community to Fe-availability that are often overlooked by examining genomic content or bulk physiological responses alone. These findings expand our knowledge about how phytoplankton in HNLC Southern Ocean waters adapt and respond to changing Fe supply.
Gilbert, Naomi E. (ORCID:0000000256915547)↗
New Hampshire Ecological Conservation: Predicting Future Conflicts between Loon Habitats and Human Development in New Hampshire using NASA Earth Observations
Bioindicator species monitoring allows researchers to infer the overall ecological health of a given area. Among these species, the Common Loon (Gavia immer), occupies the land-water interface on lakefront habitats in New Hampshire (NH) which exposes nest sites to human encroachment. In collaboration with the Loon Preservation Committee (LPC), we utilized NASA Earth observations to predict future conflicts between loon habitats and human development in New Hampshire. Land use & land cover (LULC), water clarity, and land surface temperature (LST) were analyzed to determine habitat suitability for loons. We used land cover classifications from the National Land Cover Database (NLCD) to analyze development around eight NH lakes (Canobie, First Connecticut, Massabesic, Newfound, Onway, Squam, Umbagog, and Winnipesaukee) from 2001 to 2019. Terra Moderate Resolution Imaging Spectroradiometer (MODIS), Landsat 5 Thematic Mapper (TM), and Landsat 8 Operational Land Imager (OLI) data provided land surface temperature between 2000 and 2022. Additionally, we utilized Landsat 8 OLI imagery to estimate water clarity between 2013 and 2022. LULC analysis identified areas of development around each lake for 2001, 2019, and land available for future development as of 2019. Assessment of mean summer land surface temperature revealed that loons' presence persists, despite increasing temperatures. We observed increased average water clarity in lakes that were more developed, in general the southernmost lakes analyzed within NH. We synthesized these results to assist the LPC in future conservation efforts.
ACOLITE↗
Toward the Next Generation of Air Quality Monitoring Indicators
This paper introduces an initiative to bridge the state of scientific knowledge on air pollution with the needs of policymakers and stakeholders to design the "next generation" of air quality indicators. As a first step this initiative assesses current monitoring and modeling associated with a number of important pollutants with an eye toward identifying knowledge gaps and scientific needs that are a barrier to reducing air pollution impacts on human and ecosystem health across the globe. Four outdoor air pollutants were considered e particulate matter, ozone, mercury, and Persistent Organic Pollutants (POPs) e because of their clear adverse impacts on human and ecosystem health and because of the availability of baseline data for assessment for each. While other papers appearing in this issue will address each pollutant separately, this paper serves as a summary of the initiative and presents recommendations for needed investments to provide improved measurement, monitoring, and modeling data for policyrelevant indicators. The ultimate goal of this effort is to enable enhanced public policy responses to air pollution by linking improved data and measurement methods to decision-making through the development of indicators that can allow policymakers to better understand the impacts of air pollution and, along with source attribution based on modeling and measurements, facilitate improved policies to solve it. The development of indicators represents a crucial next step in this process.
Particulate matter↗
Persistent hot carrier diffusion in boron arsenide single crystals imaged by ultrafast electron microscopy
Cubic boron arsenide (BAs) is promising for microelectronics thermal management because of its high thermal conductivity. Recently, its potential as an optoelectronic material is also being explored. However, it remains challenging to measure its photocarrier transport properties because of small sizes of available high-quality crystals. Here, we use scanning ultrafast electron microscopy (SUEM) to directly visualize the diffusion of photocarriers in BAs single crystals. Surprisingly, we observed ambipolar diffusion at low optical fluence with persistent hot carrier dynamics for above 200 ps, which can likely be attributed to the large frequency gap between acoustic and optical phonons, the same feature that is responsible for the high thermal conductivity. At higher optical fluence, we observed spontaneous electron-hole separation. Our results show BAs is an attractive optoelectronic material combining high thermal conductivity and excellent photocarrier transport properties. Finally, our study also demonstrates the capability of SUEM to probe photocarrier transport in emerging materials.
36 MATERIALS SCIENCE↗
Respiratory Toxicity of Lunar Highland Dust
Lunar dust exposures occurred during the Apollo missions while the crew was on the lunar surface and especially when microgravity conditions were attained during rendezvous in lunar orbit. Crews reported that the dust was irritating to the eyes and in some cases respiratory symptoms were elicited. NASA s vision for lunar exploration includes stays of 6 months on the lunar surface hence the health effects of periodic exposure to lunar dust need to be assessed. NASA has performed this assessment with a series of in vitro and in vivo tests on authentic lunar dust. Our approach is to "calibrate" the intrinsic toxicity of lunar dust by comparison to a nontoxic dust (TiO2) and a highly toxic dust (quartz) using intratrachael instillation of the dusts in mice. A battery of indices of toxicity is assessed at various time points after the instillations. Cultures of selected cells are exposed to test dusts to assess the adverse effects on the cells. Finally, chemical systems are used to assess the nature of the reactivity of various dusts and to determine the persistence of reactivity under various environmental conditions that are relevant to a space habitat. Similar systems are used to assess the dissolution of the dust. From these studies we will be able to set a defensible inhalation exposure standard for aged dust and predict whether we need a separate standard for reactive dust. Presently-available data suggest that aged lunar highland dust is slightly toxic, that it can adversely affect cultured cells, and that the surface reactivity induced by grinding the dust persists for a few hours after activation.
James, John T.↗