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DOE OSTI2018

Optimizing Service Restoration in Distribution Systems With Uncertain Repair Time and Demand

This paper proposes a novel method to co-optimize the distribution system operation and repair crew routing for outage restoration after extreme weather events. A two-stage stochastic mixed integer linear program is developed. The first stage is to dispatch the repair crews to the damaged components. The second stage is distribution system restoration using distributed generators, and reconfiguration. We consider demand uncertainty in terms of a truncated normal forecast error distribution, and model the uncertainty of the repair time using a lognormal distribution. A new decomposition approach, combined with the progressive hedging algorithm, is developed for solving large-scale outage management problems in an effective and timely manner. Furthermore, the proposed method is validated on modified IEEE 34- and 8500-bus distribution test systems.

24 POWER TRANSMISSION AND DISTRIBUTION↗

DOE OSTI2022

Identifying chemically similar multiphase nanoprecipitates in compositionally complex non-equilibrium oxides via machine learning

Abstract Characterizing oxide nuclear fuels is difficult due to complex fission products, which result from time-evolving system chemistry and extreme operating environments. Here, we report a machine learning-enhanced approach that accelerates the characterization of spent nuclear fuels and improves the accuracy of identifying nanophase fission products and bubbles. We apply this approach to commercial, high-burnup, irradiated light-water reactor fuels, demonstrating relationships between fission product precipitates and gases. We also gain understanding of the fission versus decay pathways of precipitates across the radius of a fuel pellet. An algorithm is provided for quantifying the chemical segregation of the fission products with respect to the high-burnup structure, which enhances our ability to process large amounts of microscopy data, including approaching the atomistic-scale. This may provide a faster route for achieving physics-based fuel performance modeling.

36 MATERIALS SCIENCE↗

DOE OSTI2018

ProgLIMI: Programmable LInk Metric Identification in Software-Defined Networks

In this paper, we propose the Programmable LInk Metric Identification (ProgLIMI) infrastructure for software-defined networking (SDN) networks. ProgLIMI identifies round-trip link metrics (RTLMs) from accumulated end-to-end metrics of selected measurement paths by leveraging the flexible routing control capability of SDN networks. ProgLIMI mainly solves three sub-problems: (1) monitor placement; (2) linearly independent measurement path construction; and (3) flow rule design. To reduce measurement cost, ProgLIMI tries to minimize the number of required monitors and flow rules. In this paper, we address the three sub-problems for both full and hybrid SDN networks. For full SDN networks, ProgLIMI can achieve full RTLM identification using only one monitor and two flow rules in each SDN switch. In contrast, the RTLM identification in hybrid SDN networks is more complicated due to the routing constraint of hybrid SDN networks. We first prove that the monitor placement problem in hybrid SDN networks is NP-hard. We then formulate the monitor placement and measurement path selection problem in hybrid SDN networks and propose a greedy heuristic algorithm to solve the problem efficiently. Our evaluations on both physical testbed and simulation platform reveal that ProgLIMI can accurately identify the RTLMs (delay and loss rate). Besides, ProgLIMI is also resource efficient, i.e., it only requires two flow rules in each SDN switch and a small number of monitors, and the extra probing traffic load incurred by ProgLIMI is also low.

97 MATHEMATICS AND COMPUTING↗

DOE OSTI2024

Flexible silicon photonic architecture for accelerating distributed deep learning

The increasing size and complexity of deep learning (DL) models have led to the wide adoption of distributed training methods in datacenters (DCs) and high-performance computing (HPC) systems. However, communication among distributed computing units (CUs) has emerged as a major bottleneck in the training process. In this study, we propose Flex-SiPAC, a flexible silicon photonic accelerated compute cluster designed to accelerate multi-tenant distributed DL training workloads. Flex-SiPAC takes a co-design approach that combines a silicon photonic hardware platform with a tailored collective algorithm, optimized to leverage the unique physical properties of the architecture. The hardware platform integrates a novel wavelength-reconfigurable transceiver design and a micro-resonator-based wavelength-reconfigurable switch, enabling the system to achieve flexible bandwidth steering in the wavelength domain. The collective algorithm is designed to support reconfigurable topologies, enabling efficient all-reduce communications that are commonly used in DL training. The feasibility of the Flex-SiPAC architecture is demonstrated through two testbed experiments. First, an optical testbed experiment demonstrates the flexible routing of wavelengths by shuffling an array of input wavelengths using a custom-designed spatial-wavelength selective switch. Second, a four-GPU testbed running two DL workloads shows a 23% improvement in job completion time compared to a similarly sized leaf-spine topology. We further evaluate Flex-SiPAC using large-scale simulations, which show that Flex-SiPAC is able to reduce the communication time by 26% to 29% compared to state-of-the-art compute clusters under representative collective operations.

Wu, Zhenguo (ORCID:0000000322847985)↗

DOE OSTI2024

Characterizing climate pathways using feature importance on echo state networks

The 2022 National Defense Strategy of the United States listed climate change as a serious threat to national security. Climate intervention methods, such as stratospheric aerosol injection, have been proposed as mitigation strategies, but the downstream effects of such actions on a complex climate system are not well understood. The development of algorithmic techniques for quantifying relationships between source and impact variables related to a climate event (i.e., a climate pathway) would help inform policy decisions. Data-driven deep learning models have become powerful tools for modeling highly nonlinear relationships and may provide a route to characterize climate variable relationships. In this paper, we explore the use of an echo state network (ESN) for characterizing climate pathways. ESNs are a computationally efficient neural network variation designed for temporal data, and recent work proposes ESNs as a useful tool for forecasting spatiotemporal climate data. However, ESNs are noninterpretable black-box models along with other neural networks. The lack of model transparency poses a hurdle for understanding variable relationships. We address this issue by developing feature importance methods for ESNs in the context of spatiotemporal data to quantify variable relationships captured by the model. We conduct a simulation study to assess and compare the feature importance techniques, and we demonstrate the approach on reanalysis climate data. In the climate application, we consider a time period that includes the 1991 volcanic eruption of Mount Pinatubo. This event was a significant stratospheric aerosol injection, which acts as a proxy for an anthropogenic stratospheric aerosol injection. Furthermore, we are able to use the proposed approach to characterize relationships between pathway variables associated with this event that agree with relationships previously identified by climate scientists.

black-box models↗

DOE OSTI2018

Pathway design using de novo steps through uncharted biochemical spaces

Existing retrosynthesis tools generally traverse production routes from a source to a sink metabolite using known enzymes or de novo steps. Generally, important considerations such as blending known transformations with putative steps, complexity of pathway topology, mass conservation, cofactor balance, thermodynamic feasibility, microbial chassis selection, and cost are largely dealt with in a posteriori fashion. The computational procedure we present here designs bioconversion routes while simultaneously considering any combination of the aforementioned design criteria. First, we track and codify as rules all reaction centers using a prime factorization-based encoding technique (rePrime). Reaction rules and known biotransformations are then simultaneously used by the pathway design algorithm (novoStoic) to trace both metabolites and molecular moieties through balanced bio-conversion strategies. We show the use of novoStoic in bypassing steps in existing pathways through putative transformations, assembling complex pathways blending both known and putative steps toward pharmaceuticals, and postulating ways to biodegrade xenobiotics.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

DOE OSTI2018

A Modeling Framework for Connectivity and Automation Co-simulation

This paper presents a unified modeling environment to simulate vehicle driving and powertrain operations within the context of the surrounding environment, including interactions between vehicles and between vehicles and the road. The goal of this framework is to facilitate the analysis of the energy impacts of vehicle connectivity and automation, as well as the development of eco-driving algorithms. Connectivity and automation indeed provide the potential to use information about the environment and future driving to minimize energy consumption. To achieve this goal, the designers of eco-driving control strategies need to simulate a wide range of driving situations, including the interactions with other vehicles and the infrastructure in a closed-loop fashion. The framework, called RoadRunner, extends the capability of Autonomie, a vehicle energy consumption and performance modeling platform, to simulate the longitudinal movements of one or more user-defined vehicles along a user-defined route. In the first part of the paper, we provide an overview of how the framework is organized. The route attributes (position of traffic lights, grade, etc.) can be automatically extracted from a digital map after origin and destination are provided. The user defines which vehicle models to simulate and in which order. The Simulink model is then automatically generated from the scenario description. In the second part of the paper, we present an example case of a scenario with an eco-approach, using traffic signals that provide their signal phase and timing information to the vehicle. A two-stage control algorithm inspired by the literature is implemented to adjust the vehicle’s velocity while traveling through a signalized corridor with the goal of minimizing fuel consumption. Finally, we present simulation results for speed patterns and powertrain operations in typical roads with multiple intersection, comparing the energy savings with traditional driving of unconnected vehicles.

Kim, Namdoo↗

DOE OSTI2020

HPC-enabled computation of demand models at scale

The purpose of this project is to examine the energy impact of urban-scale traffic for the Los Angeles Basin by developing and implementing a scalable traffic assignment model. An energy optimization function will be posed and when integrated into the optimization code for travel assignment it can be mathematically proven to converge. The energy optimization function can then be compared to the typical travel time optimization that is traditionally used in traffic assignment models. The analysis will begin with static traffic assignment models with the routing for all origin and destinations computed in parallel on high performance computing facilities. Convergence of the numerical methods rely on the solution of convex programs (or extensions of these). This step will mostly consist of demonstrating the ability to parallelize the Frank Wolfe algorithm on various platforms.

29 ENERGY PLANNING, POLICY, AND ECONOMY↗

DOE OSTI2020

HPC4Mobilty w/ UCB

32 ENERGY CONSERVATION, CONSUMPTION, AND UTILIZATI↗

DOE OSTI2019

RetSynth: determining all optimal and sub-optimal synthetic pathways that facilitate synthesis of target compounds in chassis organisms

The efficient biological production of industrially and economically important compounds is a challenging problem. Brute-force determination of the optimal pathways to efficient production of a target chemical in a chassis organism is computationally intractable. Many current methods provide a single solution to this problem, but fail to provide all optimal pathways, optional sub-optimal solutions or hybrid biological/non-biological solutions. Here we present RetSynth, software with a novel algorithm for determining all optimal biological pathways given a starting biological chassis and target chemical. By dynamically selecting constraints, the number of potential pathways scales by the number of fully independent pathways and not by the number of overall reactions or size of the metabolic network. This feature allows all optimal pathways to be determined for a large number of chemicals and for a large corpus of potential chassis organisms. Additionally, this software contains other features including the ability to collect data from metabolic repositories, perform flux balance analysis, and to view optimal pathways identified by our algorithm using a built-in visualization module. This software also identifies sub-optimal pathways and allows incorporation of non-biological chemical reactions, which may be performed after metabolic production of precursor molecules. The novel algorithm designed for RetSynth streamlines an arduous and complex process in metabolic engineering. Our stand-alone software allows the identification of candidate optimal and additional sub-optimal pathways, and provides the user with necessary ranking criteria such as target yield to decide which route to select for target production. Furthermore, the ability to incorporate non-biological reactions into the final steps allows determination of pathways to production for targets that cannot be solely produced biologically. With this comprehensive suite of features RetSynth exceeds any open-source software or webservice currently available for identifying optimal pathways for target production.

59 BASIC BIOLOGICAL SCIENCES↗

DOE OSTI2013

Routing performance analysis and optimization within a massively parallel computer

An apparatus, program product and method optimize the operation of a massively parallel computer system by, in part, receiving actual performance data concerning an application executed by the plurality of interconnected nodes, and analyzing the actual performance data to identify an actual performance pattern. A desired performance pattern may be determined for the application, and an algorithm may be selected from among a plurality of algorithms stored within a memory, the algorithm being configured to achieve the desired performance pattern based on the actual performance data.

97 MATHEMATICS AND COMPUTING↗

DOE OSTI2014

Next Generation Environmentally-Friendly Driving Feedback Systems Research and Development

The objective of this project is to design, develop, and demonstrate a next-generation, federal safety- and emission-complaint driving feedback system that can be deployed across the existing vehicle fleet and improve fleet average fuel efficiency by at least 2%. The project objective was achieved with the driving feedback system that encourages fuel-efficient vehicle travel and operation through: 1) Eco-Routing Navigation module that suggests the most fuel-efficient route from one stop to the next, 2) Eco-Driving Feedback module that provides sensible information, recommendation, and warning regarding fuel-efficient vehicle operation, and 3) Eco-Score and Eco-Rank module that provides a means for driving performance tracking, self-evaluation, and peer comparison. The system also collects and stores vehicle travel and operation data, which are used by Algorithm Updating module to customize the other modules for specific vehicles and adapts them to specific drivers over time. The driving feedback system was designed and developed as an aftermarket technology that can be retrofitted to vehicles in the existing fleet. It consists of a mobile application for smart devices running Android operating system, a vehicle on-board diagnostics connector, and a data server. While the system receives and utilizes real-time vehicle and engine data from the vehicle’s controller area network bus through the vehicle’s on-board diagnostic connector, it does not modify or interfere with the vehicle’s controller area network bus, and thus, is in compliance with federal safety and emission regulations. The driving feedback system was demonstrated and then installed on 45 vehicles from three different fleets for field operational test. These include 15 private vehicles of the general public, 15 pickup trucks of the California Department of Transportation that are assigned to individual employees for business use, and 15 shuttle buses of the Riverside Transit Agency that are used for paratransit service. Detailed vehicle travel and operation data including route taken, driving speed, acceleration, braking, and the corresponding fuel consumption, were collected both before and during the test period. The data analysis results show that the fleet average fuel efficiency improvements for the three fleets with the use of the driving feedback system are in the range of 2% to 9%. The economic viability of the driving feedback system is high. A fully deployed system would require capital investment in smart device ($150-$350) and on-board diagnostics connector ($50-$100) as well as paying operating costs for wireless data plan and subscription fees ($20-$30 per month) for connecting to the data server and receiving various system services. For individual consumers who already own a smart device (such as smartphone) and commercial fleets that already use some kind of telematics services, the costs for deploying this driving feedback system would be much lower.

33 ADVANCED PROPULSION SYSTEMS↗

DOE OSTI2022

Multi-modal Energy-optimal Trip Scheduling in Real-time (METS-R) for Transportation Hubs (Final Report)

This report summarizes the work performed under the award number EE0008524. The project develops the Multi-modal Energy-optimal Trip Scheduling in Real-time (METS-R) platform as the next-generation transportation solution based on autonomous electric vehicles (AEV) serving passenger trips from and to urban transportation hubs, to substantially reduce transportation energy consumption. Extensive data collection and analyses were first conducted to understand the demand patterns and energy consumption of hub-based on-road trips. Then, a data-driven framework that consists of an analytical module and a simulation module was proposed. For the analytical module, five planning + operation tools were developed to support the planning and energy-efficient operations of urban AEV services: the charging station planning that robotically allocates charging supplies based on the stationary charging demand distribution; the transit planning and demand adaptive scheduling model that efficiently generates\ candidate transit routes from hubs to other places and dynamically adjusts the transit time table to fit the current demand; the online energy-efficient routing that learns the energy-optimal paths from observations of link-level energy consumption in real-time; the hub-based ridesharing that matches trip requests together with account for the uncertainty of future trip demand and vehicle supply; and finally, the integrated demand prediction and anomaly detection pipeline that leverages the flight/train time table and support other planning/operation tools. To demonstrate the performance of these tools, a scalable high-performance agent-based simulator was built. We divided the urban space into multiple service zones where each zone was considered as an agent for passenger generation and vehicle charging. Two types of AEV agents were coded to model two types of mobility services: AEV taxi and AEV transit. For the AEV taxi, the team implemented the functions of pickup/drop-off passengers, energy-efficient routing, ridesharing, fleet rebalancing, and recharging. For the AEV bus, the team implemented the functions of demand-adaptive route scheduling, passenger boarding, and recharging. A high-performance computing framework was introduced to receive various profiling information (such as link energy updates, vehicle speed) from the simulator instances and communicate the operational commands back to the instances. The numerical experiments show that each of the proposed operational algorithms can reduce energy consumption and improve system efficiency. Furthermore, there exists the need to collectively consider multiple planning + operational strategies as multiple strategies can influence each other in terms of performance impacts. Recommendations for future work related to AEV planning and simulation are discussed.

29 ENERGY PLANNING, POLICY, AND ECONOMY↗

DOE OSTI2017

Effective Inclusion of Mechanical and Electrical Anharmonicity in Excited Electronic States: VPT2-TDDFT Route

Here, we present a reliable and cost-effective procedure for the inclusion of anharmonic effects in excited-state energies and spectroscopic intensities by means of second-order vibrational perturbation theory. This development is made possible thanks to a recent efficient implementation of excited-state analytic Hessians and properties within the time-dependent density functional theory framework. As illustrated in this work, by taking advantage of such algorithmic developments, it is possible to perform calculations of excited-state infrared spectra of medium-large isolated molecular systems, with anharmonicity effects included in both the energy and property surfaces. We also explore the use of this procedure for the inclusion of anharmonic effects in the simulation of vibronic bandshapes of electronic spectra, and compare the results with previous, more approximate models.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

DOE OSTI2017

Toward a systematic exploration of nano-bio interactions

Many studies of nanomaterials make non-systematic alterations of nanoparticle physicochemical properties. Given the immense size of the property space for nanomaterials, such approaches are not very useful in elucidating fundamental relationships between inherent physicochemical properties of these materials and their interactions with, and effects on, biological systems. Data driven artificial intelligence methods such as machine learning algorithms have proven highly effective in generating models with good predictivity and some degree of interpretability. They can provide a viable method of reducing or eliminating animal testing. However, careful experimental design with the modelling of the results in mind is a proven and efficient way of exploring large materials spaces. This approach, coupled with high speed automated experimental synthesis and characterization technologies now appearing, is the fastest route to developing models that regulatory bodies may find useful. We advocate greatly increased focus on systematic modification of physicochemical properties of nanoparticles combined with comprehensive biological evaluation and computational analysis. This is essential to obtain better mechanistic understanding of nano-bio interactions, and to derive quantitatively predictive and robust models for the properties of nanomaterials that have useful domains of applicability. - Highlights: • Nanomaterials studies make non-systematic alterations to nanoparticle properties. • Vast nanomaterials property spaces require systematic studies of nano-bio interactions. • Experimental design and modelling are efficient ways of exploring materials spaces. • We advocate systematic modification and computational analysis to probe nano-bio interactions.

60 APPLIED LIFE SCIENCES↗

DOE OSTI2017

Rapid Calculation of Max-Min Fair Rates for Multi-Commodity Flows in Fat-Tree Networks

Max-min fairness is often used in the performance modeling of interconnection networks. Existing methods to compute max-min fair rates for multi-commodity flows have high complexity and are computationally infeasible for large networks. In this paper, we show that by considering topological features, this problem can be solved efficiently for the fat-tree topology that is widely used in data centers and high performance compute clusters. Several efficient new algorithms are developed for this problem, including a parallel algorithm that can take advantage of multi-core and shared-memory architectures. Using these algorithms, we demonstrate that it is possible to find the max-min fair rate allocation for multi-commodity flows in fat-tree networks that support tens of thousands of nodes. We evaluate the run-time performance of the proposed algorithms and show improvement in orders of magnitude over the previously best known method. Finally, we further demonstrate a new application of max-min fair rate allocation that is only computationally feasible using our new algorithms.

97 MATHEMATICS AND COMPUTING↗

DOE OSTI2024

Correlated pair ansatz with a binary tree structure

We develop an efficient algorithm to implement the recently introduced binary tree state (BTS) ansatz on a classical computer. BTS allows a simple approximation to permanents arising from the computationally intractable antisymmetric product of interacting geminals and respects size-consistency. We show how to compute BTS overlap and reduced density matrices efficiently. We also explore two routes for developing correlated BTS approaches: Jastrow coupled cluster on BTS and linear combinations of BT states. Here, the resulting methods show great promise in benchmark applications to the reduced Bardeen–Cooper–Schrieffer Hamiltonian and the one-dimensional XXZ Heisenberg Hamiltonian.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

DOE OSTI2014

Electricity Demand Evolution Driven by Storm Motivated Population Movement

Managing the risks posed by climate change to energy production and delivery is a challenge for communities worldwide. Sea Level rise and increased frequency and intensity of natural disasters due to sea surface temperature rise force populations to move locations, resulting in changing patterns of demand for infrastructure services. Thus, Infrastructures will evolve to accommodate new load centers while some parts of the network are underused, and these changes will create emerging vulnerabilities. Combining climate predictions and agent based population movement models shows promise for exploring the universe of these future population distributions and changes in coastal infrastructure configurations. In this work, we created a prototype agent based population distribution model and developed a methodology to establish utility functions that provide insight about new infrastructure vulnerabilities that might result from these patterns. Combining climate and weather data, engineering algorithms and social theory, we use the new Department of Energy (DOE) Connected Infrastructure Dynamics Models (CIDM) to examine electricity demand response to increased temperatures, population relocation in response to extreme cyclonic events, consequent net population changes and new regional patterns in electricity demand. This work suggests that the importance of established evacuation routes that move large populations repeatedly through convergence points as an indicator may be under recognized.

Allen, Melissa R↗