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NASA NTRS1980

The application of LANDSAT remote sensing technology to natural resources management. Section 1: Introduction to VICAR - Image classification module. Section 2: Forest resource assessment of Humboldt County.

A teaching module on image classification procedures using the VICAR computer software package was developed to optimize the training benefits for users of the VICAR programs. The field test of the module is discussed. An intensive forest land inventory strategy was developed for Humboldt County. The results indicate that LANDSAT data can be computer classified to yield site specific forest resource information with high accuracy (82%). The "Douglas-fir 80%" category was found to cover approximately 21% of the county and "Mixed Conifer 80%" covering about 13%. The "Redwood 80%" resource category, which represented dense old growth trees as well as large second growth, comprised 4.0% of the total vegetation mosaic. Furthermore, the "Brush" and "Brush-Regeneration" categories were found to be a significant part of the vegetative community, with area estimates of 9.4 and 10.0%.

Fox, L., III↗
NASA NTRS1995

Channel fading for mobile satellite communications using spread spectrum signaling and TDRSS

This paper will present some preliminary results from a propagation experiment which employed NASA's TDRSS and an 8 MHz chip rate spread spectrum signal. Channel fade statistics were measured and analyzed in 21 representative geographical locations covering urban/suburban, open plain, and forested areas. Cumulative distribution Functions (CDF's) of 12 individual locations are presented and classified based on location. Representative CDF's from each of these three types of terrain are summarized. These results are discussed, and the fade depths exceeded 10 percent of the time in three types of environments are tabulated. The spread spectrum fade statistics for tree-lined roads are compared with the Empirical Roadside Shadowing Model.

Jenkins, Jeffrey D.↗
NASA NTRS2010

Multiple Spectral-Spatial Classification Approach for Hyperspectral Data

A .new multiple classifier approach for spectral-spatial classification of hyperspectral images is proposed. Several classifiers are used independently to classify an image. For every pixel, if all the classifiers have assigned this pixel to the same class, the pixel is kept as a marker, i.e., a seed of the spatial region, with the corresponding class label. We propose to use spectral-spatial classifiers at the preliminary step of the marker selection procedure, each of them combining the results of a pixel-wise classification and a segmentation map. Different segmentation methods based on dissimilar principles lead to different classification results. Furthermore, a minimum spanning forest is built, where each tree is rooted on a classification -driven marker and forms a region in the spectral -spatial classification: map. Experimental results are presented for two hyperspectral airborne images. The proposed method significantly improves classification accuracies, when compared to previously proposed classification techniques.

Tarabalka, Yuliya↗
NASA NTRS2012

Utilizing NASA Earth Observing System (EOS) Data to Determine Ideal Planting Locations for Wetland Tree Species in St. Bernard Parish, Louisiana

St. Bernard Parish, in southeast Louisiana, is rapidly losing coastal forests and wetlands due to a combination of natural and anthropogenic disturbances (e.g. subsidence, saltwater intrusion, low sedimentation, nutrient deficiency, herbivory, canal dredging, levee construction, spread of invasive species, etc.). After Hurricane Katrina severely impacted the area in 2005, multiple Non-Governmental Organizations (NGOs) have worked not only on rebuilding destroyed dwellings, but on rebuilding the ecosystems that once protected the citizens of St. Bernard Parish. Volunteer groups, NGOs, and government entities often work separately and independently of each other and use different sets of information to choose the best planting sites for coastal forests. Using NASA EOS, NRCS soil surveys, and ancillary road and canal data in conjunction with ground truthing, the team created maps of optimal planting sites for several species of wetland trees to aid in unifying these organizations, who share a common goal, under one plan. The methodology for this project created a comprehensive Geographic Information System (GIS) to help identify suitable planting sites in St. Bernard Parish. This included supplementing existing elevation data using LIDAR data and classifying existing land cover in the study area from ASTER multispectral satellite data. Low altitude AVIRIS hyperspectral imagery was used to assess the health of vegetation over an area near the intersection of the Mississippi River Gulf Outlet Canal (MRGO) and Bayou la Loutre. Historic extent of coastal forests was mapped using aerial photos from USGS collected between 1952 and 1956. The final products demonstrated the utility of combining NASA EOS with other geospatial data in assessing, monitoring, and restoring of coastal ecosystems in Louisiana. This methodology also provides a useful template for other ecological forecasting and coastal restoration applications.

Reahard, Ross↗
NASA NTRS1985

Analysis of data acquired by Shuttle Imaging Radar SIR-A and Landsat Thematic Mapper over Baldwin County, Alabama

Seasonally compatible data collected by SIR-A and by Landsat 4 TM over the lower coastal plain in Alabama were coregistered, forming a SIR-A/TM multichannel data set with 30 m x 30 m pixel size. Spectral signature plots and histogram analysis of the data were used to observe data characteristics. Radar returns from pine forest classes correlated highly with the tree ages, suggesting the potential utility of microwave remote sensing for forest biomass estimation. As compared with the TM-only data set, the use of SIR-A/TM data set improved classification accuracy of the seven land cover types studied. In addition, the SIR-A/TM classified data support previous finding by Engheta and Elachi (1982) that microwave data appear to be correlated with differing bottomland hardwood forest vegetation as associated with varying water regimens (i.e., wet versus dry).

Wu, S.-T.↗
DOE OSTI2020

At-source Recovery of Rare Earth Elements from Coal Mine Drainage

Conventional acid mine drainage (AMD) treatment consists of pH adjustment, oxidation, and separation of solid precipitates from discharge quality water. Alkaline addition increases the pH to the range 7 to 9 to precipitate the regulated metals Al and Mn ions as hydroxides. Mechanical or chemical oxidation then converts the reduced iron species Fe 2+ to Fe 3+ which precipitates at a low pH value as ferric hydroxide (Fe(OH) 3 ). Co-precipitation of Rare Earth Elements (REEs) with hydroxides creates a gangue-rich matrix from which REEs must be separated. Fe(OH)3 is generally the most abundant gangue-forming metal. Current research by the project team has shown raw, untreated AMD has an average total rare earth element content (TREE) of about 287 μg/L (0.287 ppm). Operators of AMD-producing facilities are obliged to treat it to neutralize acidity and remove regulated metals (e.g., iron (Fe), aluminum (Al), and manganese (Mn)) prior to discharge. Ongoing research indicates conventional AMD treatment concentrates TREE in resulting precipitates (AMD sludge) by an average factor of 2,635x to an average dry weight, elemental concentration of 708 g/t (ppm). While the economics of recovering REEs from AMD sludge are appealing, much of the cost of REE recovery would be incurred during separation of REEs from the gangue metals: Fe, Al, and Mn. Significant gains can be made by precipitating REEs when most of these gangue metals are still in solution. Significant improvements in REE extraction efficiency can be obtained through separation of REEs from the aqueous phase AMD, upstream of conventional AMD treatment by: 1) creating an enriched REE feedstock, 2) producing a more consistent feedstock, 3) reducing transportation costs to an REE refinery, 4) reducing acid consumption in the acid leaching step, and 5) reducing the volume of waste produced at the ALSX plant. This project is exploring two novel approaches for extracting REEs upstream of the conventional AMD treatment plants to create a purified REE feedstock while leaving the bulk of the Fe, Al, and Mn in solution for subsequent treatment. While the average TREE concentration of raw AMD is low and individual sites range between 10 and 2,200 μg/L, successful at-source REE separation will generate a superior feedstock to a conventional ALSX process and significantly improve the economics and environmental performance of REE extraction from AMD. AMD can be classified into two types: type A is net acid and iron is partly oxidized while type B is net alkaline, and iron occurs in the reduced, ferrous state. In Case A, the pH is raised slightly, which will precipitate Fe 3+ and Al 3+ but not REEs. The other important type of AMD is net alkaline water found in flooded, anoxic deep mines. These generally have a pH > 6.0 and are net alkaline. REE concentrations are also much lower than those found in acidic AMD while the volumes and flux are much higher. Most of these are pumped discharges with almost no Al. Case B AMD is strongly reduced and, like Case A water, Fe and Mn ions are similarly reduced and therefore soluble at pH <9.0. REEs and an array of transition ions will be the only trivalent cations in this type of AMD. In Case B, both upward pH adjustment under reducing conditions and application of an electrochemically stimulated supported liquid membrane strategy to separate REEs from ferrous ion will be explored.

01 COAL, LIGNITE, AND PEAT↗
NASA NTRS1989

NETRA: A parallel architecture for integrated vision systems. 1: Architecture and organization

Computer vision is regarded as one of the most complex and computationally intensive problems. An integrated vision system (IVS) is considered to be a system that uses vision algorithms from all levels of processing for a high level application (such as object recognition). A model of computation is presented for parallel processing for an IVS. Using the model, desired features and capabilities of a parallel architecture suitable for IVSs are derived. Then a multiprocessor architecture (called NETRA) is presented. This architecture is highly flexible without the use of complex interconnection schemes. The topology of NETRA is recursively defined and hence is easily scalable from small to large systems. Homogeneity of NETRA permits fault tolerance and graceful degradation under faults. It is a recursively defined tree-type hierarchical architecture where each of the leaf nodes consists of a cluster of processors connected with a programmable crossbar with selective broadcast capability to provide for desired flexibility. A qualitative evaluation of NETRA is presented. Then general schemes are described to map parallel algorithms onto NETRA. Algorithms are classified according to their communication requirements for parallel processing. An extensive analysis of inter-cluster communication strategies in NETRA is presented, and parameters affecting performance of parallel algorithms when mapped on NETRA are discussed. Finally, a methodology to evaluate performance of algorithms on NETRA is described.

Choudhary, Alok N.↗
DOE OSTI2019

Biogeographic classification of streams using fish community– and trait–environment relationships

Abstract Aim Present a hybrid biogeographic and environmentally constrained clustering approach to classify ~853,000 stream reaches in the eastern United States. Examine the frequency of stream typologies in the landscape relative to anthropogenic stressors to identify potential stream conservation needs. Location Eastern United States. Methods Fish communities at 956 least‐disturbed sampling reaches were characterized using taxonomic and functional composition of native species. Environmental variables summarized within stream reaches included stream discharge, channel gradient, hydrologic regime, summer water temperature and boundaries of freshwater ecoregions. Multivariate regression trees were used to relate environmental variables to fish communities while simultaneously developing taxa‐ and trait‐specific biogeographic classifications. We then overlaid stream classifications with indices of anthropogenic disturbances to evaluate rarity and risk of complete loss of natural representation of stream types. Results Taxonomically based classes represented a combination of ecoregional boundaries and environmental gradients, whereas temperature gradients were most important in differentiating functional composition. An optimal taxonomy‐based classification contained 13 classes and explained 26.4% of community variation, and the optimal trait‐based classification contained 6 classes, explaining 25.2% of community variation. Overlaying class maps with an anthropogenic disturbance index revealed substantial variation in the severity of degradation among classes relative to their abundance in the landscape, especially rare classes (i.e., large rivers and cold headwater systems). Main conclusions We demonstrate the value of integrating local, regional and historical biogeographic factors with taxonomic and functional characteristics of freshwater biota to classify ecosystems based on mechanistic biota–environment relationships. This approach is important to addressing the challenge of developing stream classifications that reconcile the environmental drivers of community trait composition with the constraints of biogeographic regionality at large spatial scales. Furthermore, the spatially explicit and high‐resolution maps disseminated here can uniquely inform management decisions regarding anthropogenic threats to the biodiverse freshwaters of the eastern United States.

Troia, Matthew J.↗
DOE OSTI2022

Application of Multi-Criteria Decision Analysis Techniques for Informing Select Agent Designation and Decision Making

The Centers for Disease Control and Prevention (CDC) Select Agent Program establishes a list of biological agents and toxins that potentially threaten public health and safety, the procedures governing the possession, utilization, and transfer of those agents, and training requirements for entities working with them. Every 2 years the Program reviews the select agent list, utilizing subject matter expert (SME) assessments to rank the agents. In this study, we explore the applicability of multi-criteria decision analysis (MCDA) techniques and logic tree analysis to support the CDC Select Agent Program biennial review process, applying the approach broadly to include non-select agents to evaluate its generality. We conducted a literature search for over 70 pathogens against 15 criteria for assessing public health and bioterrorism risk and documented the findings for archiving. The most prominent data gaps were found for aerosol stability and human infectious dose by inhalation and ingestion routes. Technical review of published data and associated scoring recommendations by pathogen-specific SMEs was found to be critical for accuracy, particularly for pathogens with very few known cases, or where proxy data (e.g., from animal models or similar organisms) were used to address data gaps. Analysis of results obtained from a two-dimensional plot of weighted scores for difficulty of attack (i.e., exposure and production criteria) vs. consequences of an attack (i.e., consequence and mitigation criteria) provided greater fidelity for understanding agent placement compared to a 1-to-n ranking and was used to define a region in the upper right-hand quadrant for identifying pathogens for consideration as select agents. A sensitivity analysis varied the numerical weights attributed to various properties of the pathogens to identify potential quantitative (x and y) thresholds for classifying select agents. The results indicate while there is some clustering of agent scores to suggest thresholds, there are still pathogens that score close to any threshold, suggesting that thresholding “by eye” may not be sufficient. The sensitivity analysis indicates quantitative thresholds are plausible, and there is good agreement of the analytical results with select agent designations. A second analytical approach that applied the data using a logic tree format to rule out pathogens for consideration as select agents arrived at similar conclusions.

60 APPLIED LIFE SCIENCES↗
DOE OSTI2019

Galaxy morphology prediction using Capsule Networks

Abstract Understanding morphological types of galaxies is a key parameter for studying their formation and evolution. Neural networks that have been used previously for galaxy morphology classification have some disadvantages, such as not being inherently invariant under rotation. In this work, we studied the performance of Capsule Network (CapsNet), a recently introduced neural network architecture that is rotationally invariant and spatially aware, on the task of galaxy morphology classification. We designed two evaluation scenarios based on the answers from the question tree in the Galaxy Zoo project. In the first scenario, we used CapsNet for regression and predicted probabilities for all of the questions. In the second scenario, we chose the answer to the first morphology question that had the highest user agreement as the class of the object and trained a CapsNet classifier, where we also reconstructed galaxy images. We achieved promising results in both of these scenarios. Automated approaches such as the one introduced here will play a critical role in the upcoming large sky surveys.

Katebi, Reza↗
DOE OSTI2024

Training toward significance with the decorrelated event classifier transformer neural network

Experimental particle physics uses machine learning for many tasks, where one application is to classify signal and background events. This classification can be used to bin an analysis region to enhance the expected significance for a mass resonance search. In natural language processing, one of the leading neural network architectures is the transformer. In this work, an event classifier transformer is proposed to bin an analysis region, in which the network is trained with special techniques. The techniques developed here can enhance the significance and reduce the correlation between the network’s output and the reconstructed mass. It is found that this trained network can perform better than boosted decision trees and feed-forward networks. Published by the American Physical Society 2024

Astronomy & Astrophysics↗
DOE OSTI2020

Non-standard interactions in radiative neutrino mass models

Models of radiative Majorana neutrino masses require new scalars and/or fermions to induce lepton-number-violating interactions. We show that these new particles also generate observable neutrino non-standard interactions (NSI) with matter. We classify radiative models as type-I or II, with type-I models containing at least one Standard Model (SM) particle inside the loop diagram generating neutrino mass, and type-II models having no SM particle inside the loop. While type-II radiative models do not generate NSI at tree-level, popular models which fall under the type-I category are shown, somewhat surprisingly, to generate observable NSI at tree-level, while being consistent with direct and indirect constraints from colliders, electroweak precision data and charged-lepton flavor violation (cLFV). We survey such models where neutrino masses arise at one, two and three loops. In the prototypical Zee model which generates neutrino masses via one-loop diagrams involving charged scalars, we find that diagonal NSI can be as large as (8%, 3.8%, 9.3%) for (ε$_{ee}$, ε$_{μμ}$, ε$_{ττ}$), while off-diagonal NSI can be at most (10$^{–3}$%, 0.56%, 0.34%) for (ε$_{eμ}$, ε$_{eτ}$, ε$_{μτ}$). In one-loop neutrino mass models using leptoquarks (LQs), (ε$_{μμ}$, ε$_{ττ}$) can be as large as (21.6%, 51.7%), while ε$_{ee}$ and (ε$_{eμ}$, ε$_{eτ}$, ε$_{μτ}$) can at most be 0.6%. Other two- and three-loop LQ models are found to give NSI of similar strength. The most stringent constraints on the diagonal NSI are found to come from neutrino oscillation and scattering experiments, while the off-diagonal NSI are mostly constrained by low-energy processes, such as atomic parity violation and cLFV. We also comment on the future sensitivity of these radiative models in long-baseline neutrino experiments, such as DUNE. While our analysis is focused on radiative neutrino mass models, it essentially covers all NSI possibilities with heavy mediators.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗
DOE OSTI2020

Machine learning applied to classifying neutron resonances

The performance of nuclear reactors and other nuclear systems depends on a precise understanding of the neutron interaction cross sections for materials used in these systems. These cross sections exhibit resonance structure whose shape is determined in part by the angular momentum quantum numbers of the resonances. The correct assignment of the quantum numbers of neutron resonances is therefore of paramount importance. In this project, we apply a machine learning technique, namely decision trees, to automate the quantum number assignments. The tree is trained from simulated data generated to mimic the errors found in real data. We explore the use of several physics-motivated features for training our trees, including the nearest neighbor spacing distribution, cumulative level distribution, and channel width distributions. Initial results using random matrix theory motivated fits which demonstrated that we can determine resonance spin groups somewhat reliably. If we use these fits as features in our trees, we can train them to spot outliers corresponding to misassigned resonances. We found that with the large number of features used in this project that the decision tree tended to over t training data resulting in poor performance with respect to the test data. By reducing the number of features, we can achieve nearly perfect assignment of quantum numbers with our training data.

73 NUCLEAR PHYSICS AND RADIATION PHYSICS↗
DOE OSTI2019

Polarimetric SAR Image Terrain Classification

In practical applications of automated terrain classification from high-resolution polarimetric synthetic aperture radar (PolSAR) imagery, different terrain types may inherently contain a high level of internal variability, as when a broadly defined class (e.g., “trees”) contains elements arising from multiple subclasses (pine, oak, and willow). In addition, real-world factors such as the time of year of a collection, the moisture content of the scene, the imaging geometry, and the radar system parameters can all increase the variability observed within each class. Such variability challenges the ability of classifiers to maintain a high level of sensitivity in recognizing diverse elements that are within-class, without sacrificing their selectivity in rejecting out-of-class elements. In an effort to gauge the degree to which classifiers respond robustly in the presence of intraclass variability and generalize to untrained scenes and conditions, here we compare the performance of a suite of classifiers across six broad terrain categories from a large set of polarimetric synthetic aperture radar (PolSAR) image sets. The main contributions of this article are as follows: 1) an analysis of the robustness of a variety of current state-of-the art classification algorithms to intraclass variability found in PolSAR image sets, and 2) the associated PolSAR image and feature data that Sandia is releasing to the research community with this publication. The analysis of the classification algorithms we provide will serve as a benchmark of performance for the future PolSAR terrain classification algorithm research and development enabled by the image sets and data provided. By sharing our analysis and high-resolution fully polarimetric Sandia data with the research community, we enable others to develop and assess a new generation of robust terrain classification algorithms for PolSAR.

42 ENGINEERING↗
NASA NTRS1993

Using machine learning techniques to automate sky survey catalog generation

We describe the application of machine classification techniques to the development of an automated tool for the reduction of a large scientific data set. The 2nd Palomar Observatory Sky Survey provides comprehensive photographic coverage of the northern celestial hemisphere. The photographic plates are being digitized into images containing on the order of 10(exp 7) galaxies and 10(exp 8) stars. Since the size of this data set precludes manual analysis and classification of objects, our approach is to develop a software system which integrates independently developed techniques for image processing and data classification. Image processing routines are applied to identify and measure features of sky objects. Selected features are used to determine the classification of each object. GID3* and O-BTree, two inductive learning techniques, are used to automatically learn classification decision trees from examples. We describe the techniques used, the details of our specific application, and the initial encouraging results which indicate that our approach is well-suited to the problem. The benefits of the approach are increased data reduction throughput, consistency of classification, and the automated derivation of classification rules that will form an objective, examinable basis for classifying sky objects. Furthermore, astronomers will be freed from the tedium of an intensely visual task to pursue more challenging analysis and interpretation problems given automatically cataloged data.

Fayyad, Usama M.↗
DOE OSTI2020

Data-driven Cyberattack Detection for Photovoltaic (PV) Systems through Analyzing Micro-PMU Data

With increasing exposure to software-based sensing and control, Photovoltaic (PV) systems are facing higher risks of cyber attacks. Here, to ensure the system stability and minimize potential economic losses, it is imperative to monitor operating states and detect attacks at the early stage. To meet this demand, Micro-Phasor Measurement Units (μPMU) are increasingly popular in monitoring distribution networks. However, due to the relatively low sampling rate, μPMU has not yet been used to detect and classify cyber-attacks in power electronics enabled smart grid. To our knowledge, this is one of the first attempts to use μPMU to detect cyber attacks that degrade the performance of power electronics systems. We propose to apply data-driven methods on micro-PMU data to implement attack detection. We have evaluated data-driven methods, including decision tree (DT), K-nearest neighbor (KNN), support vector machine (SVM), artificial neural network (ANN), long short-term memory (LSTM) and convolutional neural network (CNN). The proposed CNN model achieves the required performances with the highest 99.23% accuracy and 0.9963 F 1 score.

14 SOLAR ENERGY↗
DOE OSTI2023

classLog: Logistic regression for the classification of genetic sequences

Introduction Sequencing and phylogenetic classification have become a common task in human and animal diagnostic laboratories. It is routine to sequence pathogens to identify genetic variations of diagnostic significance and to use these data in realtime genomic contact tracing and surveillance. Under this paradigm, unprecedented volumes of data are generated that require rapid analysis to provide meaningful inference. Methods We present a machine learning logistic regression pipeline that can assign classifications to genetic sequence data. The pipeline implements an intuitive and customizable approach to developing a trained prediction model that runs in linear time complexity, generating accurate output rapidly, even with incomplete data. Our approach was benchmarked against porcine respiratory and reproductive syndrome virus (PRRSv) and swine H1 influenza A virus (IAV) datasets. Trained classifiers were tested against sequences and simulated datasets that artificially degraded sequence quality at 0, 10, 20, 30, and 40%. Results When applied to a poor-quality sequence data, the classifier achieved between >85% to 95% accuracy for the PRRSv and the swine H1 IAV HA dataset and this increased to near perfect accuracy when using the full dataset. The model also identifies amino acid positions used to determine genetic clade identity through a feature selection ranking within the model. These positions can be mapped onto a maximum-likelihood phylogenetic tree, allowing for the inference of clade defining mutations. Discussion Our approach is implemented as a python package with code available at https://github.com/flu-crew/classLog .

Zeller, Michael A.↗
DOE OSTI2020

Metatranscriptomic dynamics after Verticillium dahliae infection and root damage in Olea europaea

Background: The olive tree is of particular economic interest in the Mediterranean basin. Researchers have conducted several studies on one of the most devastating disorders affecting this tree, the Verticillium wilt, which causes substantial economic losses in numerous areas. We analyzed metatranscriptomic samples taken from a previous study conducted on leaves and roots of Olea europaea that were infected with Verticillium dahliae. In addition, we also analyzed mechanically damaged roots. The aim of our approach is to describe the dynamics of the root microbiome after severe perturbations. Results: Our results not only describe the dynamics of the microbial community associated with the disturbance, but also show the high complexity of these systems and explain how this can lead to a conflicting assignment of the various types of parasitism observed in a specific organism. Conclusions: Our findings indicate that this infection, although led by Verticillium, is driven not by a single species, but by a polymicrobial consortium that also includes natural endophytes of the olive tree. This community contains both biotrophic and necrotrophic organisms that alternate and live together during the infection. In addition, opportunistic organisms appear that take profit not from plant tissues, but from new emerging populations of microorganisms. Therefore, this system can be described as a complex biological system composed of different interacting communities. Notably, our work has important considerations when it comes to classifying the type of parasitism of a given species.

Verticillium dahliae↗