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At least 199 records · Page 11

Spatial data software integration - Merging CAD/CAM/mapping with GIS and image processing

The integration of CAD/CAM/mapping with image processing using geographic information systems (GISs) as the interface is examined. Particular emphasis is given to the development of software interfaces between JPL's Video Image Communication and Retrieval (VICAR)/Imaged Based Information System (IBIS) raster-based GIS and the CAD/CAM/mapping system. The design and functions of the VICAR and IBIS are described. Vector data capture and editing are studied. Various software programs for interfacing between the VICAR/IBIS and CAD/CAM/mapping are presented and analyzed.

Logan, Thomas L.↗

The First SeaWiFS HPLC Analysis Round-Robin Experiment (SeaHARRE-1)

Four laboratories, which had contributed to various aspects of SeaWiFS calibration and validation activities, participated in the first SeaWiFS HPLC Analysis Round-Robin Experiment (SeaHARRE-1): Horn Point Laboratory (USA), the Joint Research Centre (Italy), the Laboratoire de Physique et Chimie Marines (France), and the Marine and Coastal Management group (South Africa). The analyses of the data are presented in Chapter 1 and the individual methods of the four groups are presented in Chapters 2-5. The average (or overall) conclusions of the round-robin are derived from 12 in situ stations occupied during a cruise in the Mediterranean Sea, although, only 11 stations are used in the analyses. The data set is composed of 12 replicates taken during each sampling opportunity with 3 replicates going to each of the 4 laboratories. The average (or overall) results from the intercomparison of 15 pigments or pigment associations are as follows (in some cases, data subsets that exclude pigments which were not analyzed by all the laboratories, or that had unusually large variances, are used to exclude a variety of problematic pigments): a) the accuracy of the four methods in determining the concentration of total chlorophyll a is 7.9%, (one method did not separate mono- and divinyl chlorophyll a, and if the samples containing significant divinyl chlorophyll a concentrations are ignored, the four methods have an accuracy of 6.7%); b) the accuracy in determining the full set of pigments is 19.1%; c) there is a reduction in accuracy of approximately - 12.2% for every decade (factor of 10) decrease in concentration (based on a data subset); d) the precision of the four methods using a subset data is 8.617( 6.2% for an edited subset); e) the repeatability of the four methods using the subset data is 9.2% (7.2%; for an edited subset, and f) the reproducibility of the four methods using the subset data is 21.31% (15.0% for an edited subset).

Hooker, Stanford B.↗

Space Act Agreement Maker (SAAM) With Electronic Routing System (ERouter) Developed

Members of the Commercial Technology Office at the NASA Glenn Research Center have developed an exciting new tool that greatly reduces the lead time in creating and routing Space Act Agreements. The Space Act Agreement Maker (SAAM) is an e-government Web-based system that automates the initial drafting of Space Act Agreements by technical and program personnel. SAAM also is used for editing and will be used later for maintaining electronic copies of all Space Act Agreements. During the initial drafting, the software prompts NASA personnel proposing an agreement to answer questions regarding the agreement. On the basis of the answers, the software selects from a matrix of NASA standard clauses to produce a first draft of the agreement. The draft agreement and information submitted by the NASA personnel are electronically routed to Glenn s Commercial Technology Office for review and, where necessary, editing. The final version of the agreement, along with any supporting documentation, is then routed for electronic concurrence/approval to the necessary internal review participants using the electronic routing system (e-router). SAAM was developed cooperatively by Glenn s Commercial Technology Office and Glenn s Office of Chief Counsel. Currently, SAAM is being evaluated by the NASA Headquarters General Counsel Office for use at all NASA centers. This system allows for the effective processing of Space Act Agreements for NASA s internal and external customers. Document control is maintained by a database. With SAAM s electronic routing, review times can be reduced significantly, allowing Glenn to more rapidly establish partnerships with industry. Prior to the creation of SAAM, it took several hours to draft a Space Act Agreement. With SAAM in place, the document can be written in about 30 min. Using the e-router also saves time in determining where the agreement is in the routing process. The document can be tracked easily, and delays can be avoided. Important research with industry partners can commence quickly after preliminary discussions have been held. The development of these products is in line with the expanding e-government initiative that is part of the Presidential Management Agenda. By using this product, NASA researchers can secure greater support from industry and academia partners. The Space Act Agreement Maker has been very well received at NASA Headquarters and at some of the other NASA centers as well. We anticipate that the NASA Ames Research Center will have the system in place very soon, and that some of the other centers will use SAAM in the near future. The General Counsel s office at NASA Headquarters has encouraged the Glenn team to develop a similar system for processing patent licenses. Find out more about Glenn's Technology Transfer & Partnership Office http://technology.grc.nasa.gov/.

Stauber, Laurel J.↗

An architecture for the development of real-time fault diagnosis systems using model-based reasoning

Presented here is an architecture for implementing real-time telemetry based diagnostic systems using model-based reasoning. First, we describe Paragon, a knowledge acquisition tool for offline entry and validation of physical system models. Paragon provides domain experts with a structured editing capability to capture the physical component's structure, behavior, and causal relationships. We next describe the architecture of the run time diagnostic system. The diagnostic system, written entirely in Ada, uses the behavioral model developed offline by Paragon to simulate expected component states as reflected in the telemetry stream. The diagnostic algorithm traces causal relationships contained within the model to isolate system faults. Since the diagnostic process relies exclusively on the behavioral model and is implemented without the use of heuristic rules, it can be used to isolate unpredicted faults in a wide variety of systems. Finally, we discuss the implementation of a prototype system constructed using this technique for diagnosing faults in a science instrument. The prototype demonstrates the use of model-based reasoning to develop maintainable systems with greater diagnostic capabilities at a lower cost.

Hall, Gardiner A.↗

NASA Human Research Wiki - An Online Collaboration Tool

In preparation for exploration-class missions, the Exploration Medical Capability (ExMC) element of NASA's Human Research Program (HRP) has compiled a large evidence base, which previously was available only to persons within the NASA community. The evidence base is comprised of several types of data, for example: information on more than 80 medical conditions which could occur during space flight, derived from several sources (including data on incidence and potential outcomes of these medical conditions, as captured in the Integrated Medical Model's Clinical Finding Forms). In addition, approximately 35 gap reports are included in the evidence base, identifying current understanding of the medical challenges for exploration, as well as any gaps in knowledge and/or technology that would need to be addressed in order to provide adequate medical support for these novel missions. In an effort to make the ExMC information available to the general public and increase collaboration with subject matter experts within and outside of NASA, ExMC has developed an online collaboration tool, very similar to a wiki, titled the NASA Human Research Wiki. The platform chosen for this data sharing, and the potential collaboration it could generate, is a MediaWiki-based application that would house the evidence, allow "read only" access to all visitors to the website, and editorial access to credentialed subject matter experts who have been approved by the Wiki's editorial board. Although traditional wikis allow users to edit information in real time, the NASA Human Research Wiki includes a peer review process to ensure quality and validity of information. The wiki is also intended to be a pathfinder project for other HRP elements that may want to use this type of web-based tool. The wiki website will be released with a subset of the data described and will continue to be populated throughout the year.

Barr, Y. R.↗

Unleashing the capacity of Rhodococcus for converting lignin into lipids

Bioconversion of bioresources/wastes (e.g., lignin, chemical pulping byproducts) represents a promising approach for developing a bioeconomy to help address growing energy and materials demands. Rhodococcus, a promising microbial strain, utilizes numerous carbon sources to produce lipids, which are precursors for synthesizing biodiesel and aviation fuels. However, compared to chemical conversion, bioconversion involves living cells, which is a more complex system that needs further understanding and upgrading. Various wastes amenable to bioconversion are reviewed herein to highlight the potential of Rhodococci for producing lipid-derived bioproducts. In light of the abundant availability of these substrates, Rhodococcus’ metabolic pathways converting them to lipids are analyzed from a “beginning-to-end” view. Based on an in-depth understanding of microbial metabolic routes, genetic modifications of Rhodococcus by employing emerging tools (e.g., multiplex genome editing, biosensors, and genome-scale metabolic models) are presented for promoting the bioconversion. Co-solvent enhanced lignocellulose fractionation (CELF) strategy facilitates the generation of a lignin-derived aromatic stream suitable for the Rhodococcus’ utilization. Novel alkali sterilization (AS) and elimination of thermal sterilization (ETS) approaches can significantly enhance the bioaccessibility of lignin and its derived aromatics in aqueous fermentation media, which promotes lipid titer significantly. In order to achieve value-added utilization of lignin, biodiesel and aviation fuel synthesis from lignin and lipids are further discussed. In conclusion, the possible directions for unleashing the capacity of Rhodococcus through synergistically modifying microbial strains, substrates, and fermentation processes are proposed toward a sustainable biological lignin valorization.

09 BIOMASS FUELS↗

Sensitivity of fatigue reliability in wind turbines: effects of design turbulence and the Wöhler exponent

Fatigue assessment of wind turbines involves three main sources of uncertainty: material resistance, load, and the damage accumulation model. Many studies focus on increasing the accuracy of fatigue load assessment to improve the fatigue reliability. Probabilistic modeling of the wind's turbulence standard deviation is an example of an approach used for this purpose. Editions 3 and 4 of the IEC standard for the design of wind energy generation systems (IEC 61400-1) suggest different probability distributions as alternatives for the representative turbulence in the normal turbulence model (NTM) of edition 1. There are debates on whether the suggested distributions provide conservative reliability levels, as the established design safety factors are calibrated based on the representative turbulence approach. The current study addresses the debate by comparing annual reliability based on different scenarios of NTM using a probabilistic approach. More importantly, it elaborates on the relative importance of load assessment accuracy in defining the fatigue reliability. Using the DTU 10 MW reference wind turbine and the first-order reliability method (FORM), we study the changes in the annual reliability level and its sensitivity to the three main random inputs. We perform the study considering the blade root flapwise and the tower base fore–aft moments, assuming different fatigue exponents in each load channel. The results show that integration over distributions of turbulence in each mean wind speed results in less conservative annual reliability levels than representative turbulence. The difference in the reliability levels varies according to turbulence distribution and the fatigue exponent. In the case of the tower base, the difference in the annual reliability index after 20 years can be up to 50 %. However, the model and material uncertainty have much higher effects on the reliability levels compared to load uncertainty. Knowledge about such differences in the reliability levels due to the choice of turbulence distribution is especially important, as it impacts the extent of lifetime extension through reliability reassessments.

17 WIND ENERGY↗

Data-Base Software For Tracking Technological Developments

Technology Tracking System (TechTracS) computer program developed for use in storing and retrieving information on technology and related patent information developed under auspices of NASA Headquarters and NASA's field centers. Contents of data base include multiple scanned still images and quick-time movies as well as text. TechTracS includes word-processing, report-editing, chart-and-graph-editing, and search-editing subprograms. Extensive keyword searching capabilities enable rapid location of technologies, innovators, and companies. System performs routine functions automatically and serves multiple users.

Aliberti, James A.↗

Application of Tracking and Data Relay Satellite (TDRS) Differenced One-Way Doppler (DOWD) Tracking Data for Orbit Determination and Station Acquisition Support of User Spacecraft Without TDRS Compatible Transponders

Many spacecraft are launched today with only an omni-directional (omni) antenna and do not have an onboard Tracking and Data Relay Satellite (TDRS) transponder that is capable of coherently returning a carrier signal through TDRS. Therefore, other means of tracking need to be explored and used to adequately acquire the spacecraft. Differenced One-Way Doppler (DOWD) tracking data are very useful in eliminating the problems associated with the instability of the onboard oscillators when using strictly one-way Doppler data. This paper investigates the TDRS DOWD tracking data received by the Goddard Space Flight Center (GSFC) Flight Dynamics Facility (FDF) during the launch and early orbit phases for the the Interplanetary Physics Laboratory (WIND) and the National Oceanographic and Atmospheric Administration (NOAA)-J missions. In particular FDF personnel performed an investigation of the data residuals and made an assessment of the acquisition capabilities of DOWD-based solutions. Comparisons of DOWD solutions with existing data types were performed and analyzed in this study. The evaluation also includes atmospheric editing of the DOWD data and a study of the feasibility of solving for Doppler biases in an attempt to minimize error. Furthermore, by comparing the results from WIND and NOAA-J, an attempt is made to show the limitations involved in using DOWD data for the two different mission profiles. The techniques discussed in this paper benefit the launches of spacecraft that do not have TDRS transponders on board, particularly those launched into a low Earth orbit. The use of DOWD data is a valuable asset to missions which do not have a stable local oscillator to enable high-quality solutions from the one-way/return-link Doppler tracking data.

Olszewski, A. D., Jr.↗

New Data Source for Studying and Modelling the Topside Ionosphere

The existing uncertainties about density profiles in the topside ionosphere, i.e., in the height regime from hmF2 to approx. 2000 km, requires the search for new data sources. Millions of ionograms had been recorded by the ISIS and Alouette satellites in the sixties and seventies, that never were analyzed in terms of electron density profiles. In recent years an effort started to digitize the analog recordings to prepare the ionograms for computerized analysis. This paper shows how the digital ionograms are processed and the electron density profiles (from satellite orbit altitude, 1400 km for ISIS-2, down to the F peak) are calculated. The most difficult part of the task is the automatic scaling of the echo traces in the ISIS ionograms. Unlike the ionograms from modern ionosondes, the ISIS ionograms do not identify the wave polarization of the different echo traces, so physical logic must be applied to identify the ordinary ()) and extraordinary (X) traces, and this is not always successful. Characteristic resonance features seen in the topside ionograms occur at the gyro and plasma frequencies. An elaborate scheme was developed to identify these resonance frequencies in order to determine the local plasma and gyrofrequencies. This information helps in the identification of the O and X traces, and it provides the starting density of the electron density profile. The inversion of the echo traces into electron density profiles uses the same modified Chebyshev polynomial fitting technique that is successfully applied in the ground-based Digisonde network. The automatic topside ionogram scaler with true height algorithm TOPIST is successfully scaling approx. 70% of the ionograms. An 'editing process' is available to manually scale the more difficult ionograms. The home page for the ISIS project is at http://nssdc.gsfc.nasa.gov/space/isis/isis-status.html. It provides access to as of January 2001, 3000,000 digitized ISIS ionogram data and to related software. A search page lets users select data location, time, and a host of other search criteria. The automated processing of the ISIS ionograms will begin later this year and the electron density profiles will be made available from the project home page. The ISIS data restoration efforts are supported through NASA's Applied Systems and Information Research Program.

Huang, Xue-Qin↗

The Umbra Simulation and Integration Framework Applied to Emergency Response Training

The Mine Emergency Response Interactive Training Simulation (MERITS) is intended to prepare personnel to manage an emergency in an underground coal mine. The creation of an effective training environment required realistic emergent behavior in response to simulation events and trainee interventions, exploratory modification of miner behavior rules, realistic physics, and incorporation of legacy code. It also required the ability to add rich media to the simulation without conflicting with normal desktop security settings. Our Umbra Simulation and Integration Framework facilitated agent-based modeling of miners and rescuers and made it possible to work with subject matter experts to quickly adjust behavior through script editing, rather than through lengthy programming and recompilation. Integration of Umbra code with the WebKit browser engine allowed the use of JavaScript-enabled local web pages for media support. This project greatly extended the capabilities of Umbra in support of training simulations and has implications for simulations that combine human behavior, physics, and rich media.

Hamilton, Paul Lawrence↗

AstraAI v1

AstraAI is an open-source, structure-aware AI coding agent designed for large scientific and DOE-HPC codebases such as AMReX-based applications. Unlike general-purpose coding assistants, AstraAI combines retrieval-augmented generation (RAG) with compiler-level Abstract Syntax Tree (AST) analysis to perform precise, scope-constrained code modifications. It identifies exact function spans, enforces locality of edits, and maintains cross-file invariants, enabling deterministic and build-safe transformations in complex C++/GPU environments. AstraAI is intended for developers working on large, evolving HPC frameworks where correctness, reproducibility, and structural integrity are critical. Typical use cases include modifying physics kernels, updating GPU device lambdas, and performing multi-file refactors without breaking compilation or runtime semantics. Compared to conventional LLM-based coding agents - even those with repository access - AstraAI provides structural guarantees rather than free-form text patches. It minimizes unintended diffs, prevents scope drift, preserves formatting and build stability, and reduces structural hallucinations. By integrating compiler tooling directly into the generation loop, AstraAI transforms AI-assisted coding from probabilistic text editing into deterministic, structure-preserving program transformation suitable for mission-critical scientific software.

Natarajan, Mahesh [Lawrence Berkeley National Labo↗

Morphogene-assisted transformation of Sorghum bicolor allows more efficient genome editing

Sorghum bicolor (L.) Moench, the fifth most important cereal worldwide, is a multi-use crop for feed, food, forage and fuel. To enhance the sorghum and other important crop plants, establishing gene function is essential for their improvement. For sorghum, identifying genes associated with its notable abiotic stress tolerances requires a detailed molecular understanding of the genes associated with those traits. The limits of this knowledge became evident from our earlier in-depth sorghum transcriptome study showing that over 40% of its transcriptome had not been annotated. Here, we describe a full spectrum of tools to engineer, edit, annotate and characterize sorghum’s genes. Efforts to develop those tools began with a morphogene-assisted transformation (MAT) method that led to accelerated transformation times, nearly half the time required with classical callus-based, non-MAT approaches. These efforts also led to expanded numbers of amenable genotypes, including several not previously transformed or historically recalcitrant. Another transformation advance, termed altruistic, involved introducing a gene of interest in a separate Agrobacterium strain from the one with morphogenes, leading to plants with the gene of interest but without morphogenes. The MAT approach was also successfully used to edit a target exemplary gene, phytoene desaturase. To identify single-copy transformed plants, we adapted a high-throughput technique and also developed a novel method to determine transgene independent integration. These efforts led to an efficient method to determine gene function, expediting research in numerous genotypes of this widely grown, multi-use crop.

54 ENVIRONMENTAL SCIENCES↗

AXAF user interfaces for heterogeneous analysis environments

The AXAF Science Center (ASC) will develop software to support all facets of data center activities and user research for the AXAF X-ray Observatory, scheduled for launch in 1999. The goal is to provide astronomers with the ability to utilize heterogeneous data analysis packages, that is, to allow astronomers to pick the best packages for doing their scientific analysis. For example, ASC software will be based on IRAF, but non-IRAF programs will be incorporated into the data system where appropriate. Additionally, it is desired to allow AXAF users to mix ASC software with their own local software. The need to support heterogeneous analysis environments is not special to the AXAF project, and therefore finding mechanisms for coordinating heterogeneous programs is an important problem for astronomical software today. The approach to solving this problem has been to develop two interfaces that allow the scientific user to run heterogeneous programs together. The first is an IRAF-compatible parameter interface that provides non-IRAF programs with IRAF's parameter handling capabilities. Included in the interface is an application programming interface to manipulate parameters from within programs, and also a set of host programs to manipulate parameters at the command line or from within scripts. The parameter interface has been implemented to support parameter storage formats other than IRAF parameter files, allowing one, for example, to access parameters that are stored in data bases. An X Windows graphical user interface called 'agcl' has been developed, layered on top of the IRAF-compatible parameter interface, that provides a standard graphical mechanism for interacting with IRAF and non-IRAF programs. Users can edit parameters and run programs for both non-IRAF programs and IRAF tasks. The agcl interface allows one to communicate with any command line environment in a transparent manner and without any changes to the original environment. For example, the authors routinely layer the GUI on top of IRAF, ksh, SMongo, and IDL. The agcl, based on the facilities of a system called Answer Garden, also has sophisticated support for examining documentation and help files, asking questions of experts, and developing a knowledge base of frequently required information. Thus, the GUI becomes a total environment for running programs, accessing information, examining documents, and finding human assistance. Because the agcl can communicate with any command-line environment, most projects can make use of it easily. New applications are continually being found for these interfaces. It is the authors' intention to evolve the GUI and its underlying parameter interface in response to these needs - from users as well as developers - throughout the astronomy community. This presentation describes the capabilities and technology of the above user interface mechanisms and tools. It also discusses the design philosophies guiding the work, as well as hopes for the future.

Mandel, Eric↗

Chapter 7 - CRISPR-Based Tools for Microbial Cell Factories

The development of microbial chassis for the production of a variety of biochemicals and biofuels is a growing area of research. How to efficiently manipulate genetic information to achieve optimal production of these compounds is a key area of focus in the field. In recent years, clustered regularly interspaced palindromic repeats (CRISPR) and its associated proteins (Cas) have become a popular strategy for gene editing and regulation in many organisms due to its versatility and efficacy. Here, we describe methods developed utilizing CRISPR-Cas systems for engineering microbial cell factories (e.g., bacteria and yeast) at the single gene to genome scale for mutagenesis and transcriptional regulation of target genes. Finally, we provide a perspective on the challenges and opportunities for the applications of advanced CRISPR-Cas-based tools for engineering microbial cell factories.

BIOMASS FUELS↗

Distant-acting Enhancers in Development and Disease

Multiple converging lines of evidence from experimental and human genetic studies indicate that both common and rare sequence variants involving enhancers play major roles in Mendelian and complex human disease phenotypes. We use a combination of sequence-based molecular approaches including chromatin mapping and synthesis-enabled modification of enhancer sequences, large-scale transgenic mouse studies (http://enhancer.lbl.gov), and CRISPR genome editing in the mouse model to study the in vivofunction of enhancers in developmental, evolutionary, and disease-related processes. Using examples from our ongoing work, I will illustrate how these methods provide insight into the function and evolution of distant-acting regulatory sequences and offer a starting point for understanding their role in human disease. I will discuss how improved in vivo mouse assays can be used to study candidate pathogenic human mutations in enhancers at scale, revealing the extent to which human genetic studies alone can be insufficient to identify truly causal mutations in enhancers. I will also show how such assays can be used to explore the sensitivity of enhancers that are extremely conserved ("ultraconserved") in evolution to mutations, revealing a remarkable functional robustness to sequence changes that contrasts with apparent evolutionary constraints.

Visel, A↗

Effects of islands in the Geosat footprint

The presence of land within a radar altimeter's footprint may contaminate its tracking performance and perturb the nadir oceanographic signal. A study has been performed which examines the effects of small mid-ocean islands on the Geosat tracker. The surface return waveforms, as well as the altimeter measurements, have been analyzed. Open-ocean waveforms have been compared with waveforms containing land reflections; they differ perceptibly. Computations could be performed, based on a combination of waveform data, altimeter signal strength, and sea surface heights, to detect contaminated sea-surface height values for subsequent editing.

Brooks, Ronald L.↗

Legato: Personal Computer Software for Analyzing Pressure-Sensitive Paint Data

'Legato' is personal computer software for analyzing radiometric pressure-sensitive paint (PSP) data. The software is written in the C programming language and executes under Windows 95/98/NT operating systems. It includes all operations normally required to convert pressure-paint image intensities to normalized pressure distributions mapped to physical coordinates of the test article. The program can analyze data from both single- and bi-luminophore paints and provides for both in situ and a priori paint calibration. In addition, there are functions for determining paint calibration coefficients from calibration-chamber data. The software is designed as a self-contained, interactive research tool that requires as input only the bare minimum of information needed to accomplish each function, e.g., images, model geometry, and paint calibration coefficients (for a priori calibration) or pressure-tap data (for in situ calibration). The program includes functions that can be used to generate needed model geometry files for simple model geometries (e.g., airfoils, trapezoidal wings, rotor blades) based on the model planform and airfoil section. All data files except images are in ASCII format and thus are easily created, read, and edited. The program does not use database files. This simplifies setup but makes the program inappropriate for analyzing massive amounts of data from production wind tunnels. Program output consists of Cartesian plots, false-colored real and virtual images, pressure distributions mapped to the surface of the model, assorted ASCII data files, and a text file of tabulated results. Graphical output is displayed on the computer screen and can be saved as publication-quality (PostScript) files.

Schairer, Edward T.↗