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The high-power klystron amplifiers at the Spallation Neutron Source (SNS) have been in operation for over 100,000 hours. Overcurrent faults from the klystron cathodes comprise the bulk of RF System downtime. Reliable operation is of particular interest to the SNS, and data from over a decade of operation is used to help mitigate repetitive overcurrent conditions.
Klystron amplifiers have been operated at the Spallation Neutron Source (SNS) in support of the user program since 2006. SNS tubes have amassed over 100,000 hours of high-voltage and filament-on time providing a significant source of operational statistics for high power, high-duty klystrons. Additionally, the SNS Radiofrequency (RF) Systems Group has developed operational methods to mitigate specific reliability challenges, such as cathode arcing and output power instability. Despite much progress, many of these challenges persist, prompting the SNS to update the procedures used for klystron processing as well as develop a higher throughput test stand.
Sphagnum magellanicum is one of two Sphagnum species for which a reference-quality genome exists to facilitate research in ecological genomics. Phylogenetic and comparative genomic analyses were conducted based on resequencing data from 48 samples and RADseq analyses based on 187 samples. Here, we report that there are four clades/species within the S. magellanicum complex in eastern North America and that the reference genome belongs to Sphagnum divinum . The species exhibit tens of thousands (RADseq) to millions (resequencing) of fixed nucleotide differences. Two species, however, referred to informally as S. diabolicum and S. magni because they have not been formally described, are differentiated by only 100 (RADseq) to 1000 (resequencing) of differences. Introgression among species in the complex is demonstrated using D-statistics and f 4 ratios. One ecologically important functional trait, tissue decomposability, which underlies peat (carbon) accumulation, does not differ between segregates in the S. magellanicum complex, although previous research showed that many closely related Sphagnum species have evolved differences in decomposability/carbon sequestration. Phylogenetic resolution and more accurate species delimitation in the S. magellanicum complex substantially increase the value of this group for studying the early evolutionary stages of climate adaptation and ecological evolution more broadly.
The Gamow Explorer will use Gamma Ray Bursts (GRBs) to: 1) probe the high redshift universe (z < 6) when the first stars were born, galaxies formed and Hydrogen was reionized; and 2) enable multi-messenger astrophysics by rapidly identifying Electro-Magnetic (IR/Optical/X-ray) counterparts to Gravitational Wave (GW) events. GRBs have been detected out to z ~ 9 and their afterglows are a bright beacon lasting a few days that can be used to observe the spectral fingerprints of the host galaxy and intergalactic medium to map the period of reionization and early metal enrichment. Gamow Explorer is optimized to quickly identify high-z events to trigger follow-up observations with JWST and large ground-based telescopes. A wide field of view Lobster Eye X-ray Telescope (LEXT) will search for GRBs and locate them with arc-minute precision. When a GRB is detected, the rapidly slewing spacecraft will point the 5 photometric channel Photo-z Infra-Red Telescope (PIRT) to identify high redshift (z < 6) long GRBs within 100s and send an alert within 1000s of the GRB trigger. An L2 orbit provides < 95% observing efficiency with pointing optimized for follow up by the James Webb Space Telescope (JWST) and ground observatories. The predicted Gamow Explorer high-z rate is <10 times that of the Neil Gehrels Swift Observatory. The instrument and mission capabilities also enable rapid identification of short GRBs and their afterglows associated with GW events. The Gamow Explorer will be proposed to the 2021 NASA MIDEX call and if approved, launched in 2028.
An American football is a rotationally symmetric object, which, when well-thrown, spins rapidly around its symmetry axis. In the absence of aerodynamic effects, the football would be a torque-free gyroscope and the symmetry/spin axis would remain pointing in a fixed direction in space as the football moved on its parabolic path. When a pass is well-thrown through the atmosphere, however, the symmetry axis remains—at least approximately—tangent to the path of motion. The rotation of the symmetry axis must be due to aerodynamic torque; yet, that torque, at first glance, would seem to have precisely the opposite effect. In this work, we explain the action of aerodynamics on the ball's orientation at second glance.
RNA macromolecules, like proteins, fold to assume shapes that are intimately connected to their broadly recognized biological functions; however, because of their high charge and dynamic nature, RNA structures are far more challenging to determine. We introduce an approach that exploits the high brilliance of x-ray free-electron laser sources to reveal the formation and ready identification of angstrom-scale features in structured and unstructured RNAs. Previously unrecognized structural signatures of RNA secondary and tertiary structures are identified through wide-angle solution scattering experiments. With millisecond time resolution, we observe an RNA fold from a dynamically varying single strand through a base-paired intermediate to assume a triple-helix conformation. While the backbone orchestrates the folding, the final structure is locked in by base stacking. This method may help to rapidly characterize and identify structural elements in nucleic acids in both equilibrium and time-resolved experiments.
Enzymes populate ensembles of structures necessary for catalysis that are difficult to experimentally characterize. We use time-resolved mix-and-inject serial crystallography at an x-ray free electron laser to observe catalysis in a designed mutant isocyanide hydratase (ICH) enzyme that enhances sampling of important minor conformations. The active site exists in a mixture of conformations, and formation of the thioimidate intermediate selects for catalytically competent substates. The influence of cysteine ionization on the ICH ensemble is validated by determining structures of the enzyme at multiple pH values. Large molecular dynamics simulations in crystallo and time-resolved electron density maps show that Asp 17 ionizes during catalysis and causes conformational changes that propagate across the dimer, permitting water to enter the active site for intermediate hydrolysis. ICH exhibits a tight coupling between ionization of active site residues and catalysis-activated protein motions, exemplifying a mechanism of electrostatic control of enzyme dynamics.
The severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) virus enters host cells via an interaction between its Spike protein and the host cell receptor angiotensin-converting enzyme 2 (ACE2). By screening a yeast surface-displayed library of synthetic nanobody sequences, we developed nanobodies that disrupt the interaction between Spike and ACE2. Cryo–electron microscopy (cryo-EM) revealed that one nanobody, Nb6, binds Spike in a fully inactive conformation with its receptor binding domains locked into their inaccessible down state, incapable of binding ACE2. Affinity maturation and structure-guided design of multivalency yielded a trivalent nanobody, mNb6-tri, with femtomolar affinity for Spike and picomolar neutralization of SARS-CoV-2 infection. mNb6-tri retains function after aerosolization, lyophilization, and heat treatment, which enables aerosol-mediated delivery of this potent neutralizer directly to the airway epithelia.
Planned relocation is an ambitious objective that occurs in complex governance settings rife with inequalities of power, discrimination, distrust, deep uncertainty, misalignment of incentives and authorities, and other challenges. Taking planned relocation from ambition to an equitable and effective portfolio of measures will require changes in science, governance and how they work together. Research will need to understand perverse incentives, conflicts, limits to risk perception, and other factors across individuals, communities, governance levels, and sectors. Knowledge to enable planned relocation will emerge not just from technical studies but from entwined processes of action, learning and capacity building. Science and governance must advance their collaboration to better support and learn from these tangled processes to identify adaptive pathways, build agency and implement strategies under deep uncertainty.
Rivers and streams contribute to global carbon cycling by decomposing immense quantities of terrestrial plant matter. However, decomposition rates are highly variable and large-scale patterns and drivers of this process remain poorly understood. Using a cellulose-based assay to reflect the primary constituent of plant detritus, we generated a predictive model (81% variance explained) for cellulose decomposition rates across 514 globally distributed streams. A large number of variables were important for predicting decomposition, highlighting the complexity of this process at the global scale. Predicted cellulose decomposition rates, when combined with genus-level litter quality attributes, explain published leaf litter decomposition rates with high accuracy (70% variance explained). Finally, our global map provides estimates of rates across vast understudied areas of Earth and reveals rapid decomposition across continental-scale areas dominated by human activities.
Laika BOSS (Binary Object Scanning System), often written as "Laikaboss", is an object scanner and intrusion detection system that strives to be scalable, flexible, and verbose. Its goal is to take arbitrary file input and extract all relevant subfiles and metadata for use in helping analysts determine the function and maliciousness of a file at a glance. This is an extension to the original code developed by Lockheed Martin.
Understanding the organization and dynamics of turbulence structures in the atmospheric surface layer (ASL) is important for fundamental and applied research in different fields, including weather prediction, snow settling, particle and pollutant transport, and wind energy. The main challenges associated with probing and modeling turbulence in the ASL are: i) the broad range of turbulent scales associated with the different eddies present in high Reynolds-number boundary layers ranging from the viscous scale ($\mathcal{O}$(mm)) up to large energy-containing structures ($\mathcal{O}$(km)); ii) the non-stationarity of the wind conditions and the variability associated with the daily cycle of the atmospheric stability; iii) the interactions among eddies of different sizes populating different layers of the ASL, which contribute to momentum, energy, and scalar turbulent fluxes. Creative and innovative measurement techniques are required to probe near-surface turbulence by generating spatio-temporally-resolved data in the proximity of the ground and, at the same time, covering the entire ASL height with large enough streamwise extent to characterize the dynamics of larger eddies evolving aloft. To this aim, the U.S. National Science Foundation sponsored the development of the Grand-scale Atmospheric Imaging Apparatus (GAIA) enabling super-large snow particle image velocimetry (SLPIV) in the near-surface region of the ASL. This inaugural version of GAIA provides a comprehensive measuring system by coupling SLPIV and two scanning Doppler LiDARs to probe the ASL at an unprecedented resolution. A field campaign performed in 2021–2022 and its preliminary results are presented herein elucidating new research opportunities enabled by the GAIA measuring system.
The third Wind Forecast Improvement Project (WFIP3), a U.S. Department of Energy and National Oceanic and Atmospheric Administration sponsored investigation, sought to improve understanding of the physical phenomena in the atmosphere and ocean that dictate the structure and variability of wind and thermodynamic fields within the marine atmospheric boundary layer. WFIP3 focused on mesoscale and submesoscale flows -- including sea breezes, low-level jets, low-level clouds, and coastal storms -- and the ability of advanced numerical model parameterizations to represent them within fully coupled oceanic and atmospheric modeling systems and foundational weather forecast models. WFIP3 conducted a comprehensive 18-month observational study over the Northeast U.S. outer continental shelf, a high-use coastal zone, using a 3D multiscale sensor array to highly resolve the temporal, vertical, and horizontal structure of the coupled atmospheric and oceanic boundary layers. Multiple land-based study sites adjacent to the coastal ocean observed surface meteorology and vertical profiles of atmospheric properties via passive infrared and microwave radiometers, active lidars and radars, and radiosondes. At sea, an array of surface flux buoys and two vertical profiling lidar buoys observed both atmospheric and oceanic properties, augmented by land-based oceanographic radar systems and routine ship-based surveys. Intensive observations of the marine atmospheric boundary layer over the ocean was done from an air-sea interaction flux tower and extended deployments of a large autonomous barge platform. Numerous critical forecasting phenomena were observed that are being evaluated within regional coupled and uncoupled modeling systems, including the National Oceanic and Atmospheric Administration's foundational High-Resolution Rapid Refresh forecast model.
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