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At least 199 records · Page 11

Standardized naming of microbiome samples in Genomes OnLine Database

The power of next-generation sequencing has resulted in an explosive growth in the number of projects aiming to understand the metagenomic diversity of complex microbial environments. The interdisciplinary nature of this microbiome research community, along with the absence of reporting standards for microbiome data and samples, poses a significant challenge for follow-up studies. Commonly used names of metagenomes and metatranscriptomes in public databases currently lack the essential information necessary to accurately describe and classify the underlying samples, which makes a comparative analysis difficult to conduct and often results in misclassified sequences in data repositories. The Genomes OnLine Database (GOLD) (https:// gold.jgi.doe.gov/) at the Department of Energy Joint Genome Institute has been at the forefront of addressing this challenge by developing a standardized nomenclature system for naming microbiome samples. GOLD, currently in its twenty-fifth anniversary, continues to enrich the research community with hundreds of thousands of metagenomes and metatranscriptomes with well-curated and easy-to-understand names. Through this manuscript, we describe the overall naming process that can be easily adopted by researchers worldwide. Additionally, we propose the use of this naming system as a best practice for the scientific community to facilitate better interoperability and reusability of microbiome data.

59 BASIC BIOLOGICAL SCIENCES↗

Analyzing the effect of misalignment on single-filament carbon fiber tensile testing via stereoscopic computer vision imaging

An understanding of the constitutive properties of carbon fibers (CF) is critical to the accuracy of high-resolution composite simulations and to the development of CF derived from low-cost alternative precursor materials. Single-fiber tensile testing is a capable tool to measure CF properties and is well suited to research efforts where only a small number of fibers may be available. However, single-fiber tensile tests are challenging to conduct due to the difficulty in handling small diameter fibers (5-15 μm), the brittleness of single fibers, and the required nanoscale/microscale resolution of testing equipment. The accuracy of the measured properties depends on several factors, but a critical factor is fiber misalignment, especially at short gauge lengths. Current standards do not address the effect of tensile specimen misalignment on measured properties. Furthermore, this work presents a robust method of fiber alignment using stereoscopic computer vision that enables users to align fibers vertically for tensile testing to improve the accuracy of resulting mechanical properties. Additionally, an analytical relationship between fiber misalignment angle and measured properties is developed and validated against the experimental results. As a result, new best practices for single-fiber tensile testing of CF are recommended.

47 OTHER INSTRUMENTATION↗

Process-dependent anisotropic thermal conductivity of laser powder bed fusion AlSi10Mg: impact of microstructure and aluminum-silicon interfaces

Purpose AlSi10Mg alloy is commonly used in laser powder bed fusion due to its printability, relatively high thermal conductivity, low density and good mechanical properties. However, the thermal conductivity of as-built materials as a function of processing (energy density, laser power, laser scanning speed, support structure) and build orientation, are not well explored in the literature. This study aims to elucidate the relationship between processing, microstructure, and thermal conductivity. Design/methodology/approach The thermal conductivity of laser powder bed fusion (L-PBF) AlSi10Mg samples are investigated by the flash diffusivity and frequency domain thermoreflectance (FDTR) techniques. Thermal conductivities are linked to the microstructure of L-PBF AlSi10Mg, which changes with processing conditions. The through-plane exceeded the in-plane thermal conductivity for all energy densities. A co-located thermal conductivity map by frequency domain thermoreflectance (FDTR) and crystallographic grain orientation map by electron backscattered diffraction (EBSD) was used to investigate the effect of microstructure on thermal conductivity. Findings The highest through-plane thermal conductivity (136 ± 2 W/m-K) was achieved at 59 J/mm 3 and exceeded the values reported previously. The in-plane thermal conductivity peaked at 117 ± 2 W/m-K at 50 J/mm 3 . The trend of thermal conductivity reducing with energy density at similar porosity was primarily due to the reduced grain size producing more Al-Si interfaces that pose thermal resistance. At these interfaces, thermal energy must convert from electrons in the aluminum to phonons in the silicon. The co-located thermal conductivity and crystallographic grain orientation maps confirmed that larger colonies of columnar grains have higher thermal conductivity compared to smaller columnar grains. Practical implications The thermal properties of AlSi10Mg are crucial to heat transfer applications including additively manufactured heatsinks, cold plates, vapor chambers, heat pipes, enclosures and heat exchangers. Additionally, thermal-based nondestructive testing methods require these properties for applications such as defect detection and simulation of L-PBF processes. Industrial standards for L-PBF processes and components can use the data for thermal applications. Originality/value To the best of the authors’ knowledge, this paper is the first to make coupled thermal conductivity maps that were matched to microstructure for L-PBF AlSi10Mg aluminum alloy. This was achieved by a unique in-house thermal conductivity mapping setup and relating the data to local SEM EBSD maps. This provides the first conclusive proof that larger grain sizes can achieve higher thermal conductivity for this processing method and material system. This study also shows that control of the solidification can result in higher thermal conductivity. It was also the first to find that the build substrate (with or without support) has a large effect on thermal conductivity.

Engineering↗

Expanding standards in viromics: in silico evaluation of dsDNA viral genome identification, classification, and auxiliary metabolic gene curation

Viruses influence global patterns of microbial diversity and nutrient cycles. Though viral metagenomics (viromics), specifically targeting dsDNA viruses, has been critical for revealing viral roles across diverse ecosystems, its analyses differ in many ways from those used for microbes. To date, viromics benchmarking has covered read pre-processing, assembly, relative abundance, read mapping thresholds and diversity estimation, but other steps would benefit from benchmarking and standardization. Here we use in silico-generated datasets and an extensive literature survey to evaluate and highlight how dataset composition (i.e., viromes vs bulk metagenomes) and assembly fragmentation impact (i) viral contig identification tool, (ii) virus taxonomic classification, and (iii) identification and curation of auxiliary metabolic genes (AMGs). The in silico benchmarking of five commonly used virus identification tools show that gene-content-based tools consistently performed well for long (≥3 kbp) contigs, while k -mer- and blast-based tools were uniquely able to detect viruses from short (≤3 kbp) contigs. Notably, however, the performance increase of k -mer- and blast-based tools for short contigs was obtained at the cost of increased false positives (sometimes up to ~5% for virome and ~75% bulk samples), particularly when eukaryotic or mobile genetic element sequences were included in the test datasets. Furthermore, for viral classification, variously sized genome fragments were assessed using gene-sharing network analytics to quantify drop-offs in taxonomic assignments, which revealed correct assignations ranging from ~95% (whole genomes) down to ~80% (3 kbp sized genome fragments). A similar trend was also observed for other viral classification tools such as VPF-class, ViPTree and VIRIDIC, suggesting that caution is warranted when classifying short genome fragments and not full genomes. Finally, we highlight how fragmented assemblies can lead to erroneous identification of AMGs and outline a best-practices workflow to curate candidate AMGs in viral genomes assembled from metagenomes. Together, these benchmarking experiments and annotation guidelines should aid researchers seeking to best detect, classify, and characterize the myriad viruses ‘hidden’ in diverse sequence datasets.

59 BASIC BIOLOGICAL SCIENCES↗

Operating Dynamic Reserve Dimensioning Using Probabilistic Forecasts

The rapid integration of variable energy sources (VRES) into power grids increases variability and uncertainty of the net demand, making the power system operation challenging. Operating reserve is used by system operators to manage and hedge against such variability and uncertainty. Traditionally, reserve requirements are determined by rules-of-thumb (static reserve requirements, e.g., NERC Reliability Standards), and more recently, dynamic reserve requirements from tools and methods which are in the adoption process (e.g., DynADOR, DRD, and RESERVE, among others). While these methods/tools significantly improve the static rule-of-thumb approaches, they rely exclusively on deterministic data (i.e., best guess only). Consequently, these methods disregard the probabilistic uncertainty thresholds associated with specific days and their weather conditions (i.e., best guess plus probabilistic uncertainty). This work presents practical approaches to determine the operating reserve requirements leveraging the wealth information from probabilistic forecasts. Proposed approaches are validated and tested using actual data from the CAISO system. Furthermore, results show the benefits in terms of risk reduction of considering the probabilistic forecast information into the dimensioning process of operating reserve requirements.

29 ENERGY PLANNING, POLICY, AND ECONOMY↗

Cyber-Informed Engineering Implementation Guide: Version 1.0 [Slides]

This Implementation Guide describes the principles of Cyber-Informed Engineering (CIE) and outlines questions that engineering teams should consider during each phase of a system's lifecycle to effectively employ these principles. It describes what it means to engineer systems in a cyber-informed way, rather than offering a comprehensive, step-by-step process or procedure for CIE implementation. This guide complements - but does not replace - the application of cybersecurity standards or practices currently in place within an organization. Engineers and technicians that design critical energy infrastructure installations can use this Implementation Guide to integrate the 12 principles of CIE into each phase of the engineering lifecycle, from concept to retirement. The guide is aimed at system or design engineers, rather than software engineers or operational cybersecurity practitioners. The engineers who design, build, operate, and maintain the physical infrastructure are best positioned to leverage a system's engineering design to diminish the severity of cyber attacks or digital technology failures. CIE expands cybersecurity decisions into the engineering space, not by asking engineers to become cyber experts, but by calling on engineers to apply engineering tools and make engineering decisions that improve cybersecurity outcomes. CIE examines the engineering consequences that a sophisticated cyber attacker could achieve and drives engineering changes that may provide deterministic mitigations to limit or eliminate those consequences.

24 POWER TRANSMISSION AND DISTRIBUTION↗

Taming the Wild West: Assessing Impacts-Relevant Climate Data Products (Final Report)

Impacts-relevant Earth system data refers to observational and ESM data that are downscaled, debiased, validated, and provisioned for use by decision-makers. Impacts-relevant Earth system data is essential for mitigation and adaptation planning across a variety of regions and sectors. A vast number of these data products have emerged in recent years, which has led to confusion among stakeholders and scientists as to the best product to use. With no standard evaluation protocol available for these products, the decision on which product to use was sometimes made because it was pragmatic rather than the best product to use. This project sought to develop foundational capabilities around impacts-relevant data products that would support more informed selection and application of these products. This work has been immensely successful, driving several academic publications and supported the development of a community of practice around impacts-relevant data products.

54 ENVIRONMENTAL SCIENCES↗

Cyber-Informed Engineering Implementation Guide

This Implementation Guide describes the principles of Cyber-Informed Engineering (CIE) and outlines questions that engineering teams should consider during each phase of a system’s lifecycle to effectively employ these principles. It describes what it means to engineer systems in a cyber-informed way, rather than offering a comprehensive, step-by-step process or procedure for CIE implementation. This guide complements—but does not replace—the application of cybersecurity standards or practices currently in place within an organization. Engineers and technicians that design critical energy infrastructure installations can use this Implementation Guide to integrate the 12 principles of CIE into each phase of the engineering lifecycle, from concept to retirement. The guide is aimed at system or design engineers, rather than software engineers or operational cybersecurity practitioners. The engineers who design, build, operate, and maintain the physical infrastructure are best positioned to leverage a system’s engineering design to diminish the severity of cyber attacks or digital technology failures. CIE expands cybersecurity decisions into the engineering space, not by asking engineers to become cyber experts, but by calling on engineers to apply engineering tools and make engineering decisions that improve cybersecurity outcomes. CIE examines the engineering consequences that a sophisticated cyber attacker could achieve and drives engineering changes that may provide deterministic mitigations to limit or eliminate those consequences.

42 ENGINEERING↗

Electrolyte strategies for practically viable all-solid-state lithium-sulfur batteries

All-solid-state lithium-sulfur batteries are a promising platform due to their high gravimetric energy density and enhanced safety. However, they face numerous challenges that currently obstruct commercial adoption. The key to overcoming these challenges lies in the rational selection and targeted development of solid-state electrolytes, where different materials classes present distinct trade-offs between performance and practicality. We assert that sulfide electrolytes offer the best compatibility with the cathode and anode requirements for practical sulfur cells, with halides and borohydrides also showing potential for use in the cathode with further development. We provide cell-level target parameters to ensure that the field moves consistently towards commercial relevance. Looking forward, we call for the adoption of the chlorinated argyrodite with a composition range of Li 6-x PS 5-x Cl 1+x (x = 0 - 0.5) as a standardized solid-state electrolyte to enable rigorous benchmarking across the field and accelerate battery development.

25 ENERGY STORAGE↗

Validating and Comparing Energy Estimation Methods at Water Resource Recovery Facilities

Water resource recovery facilities play a crucial role in the water-energy nexus, consuming a substantial amount of energy in the United States. Growing treatment volumes and more stringent water quality standards are expected to increase the amount of energy needed to treat wastewater, but accurately estimating energy consumption and potential remains challenging due to variability in scale, treatment methods, and effluent treatment standards. In this study, we used publicly available data to evaluate the accuracy of methods for estimating energy consumption and generation, then quantified uncertainty based on key factors like flow rate, treatment level, and geographic location. To validate methods, we estimated energy consumption and generation at the facility-level, then compared estimates to self-reported data from utilities in major U.S. cities. We found that process models of treatment trains under best practice configurations were accurate relative to other methods for estimating electricity use, total energy use, and electricity generation from biogas utilization, and less complex methods based on effluent treatment level and prime movers also performed well for estimating electricity consumption and generation, respectively. Applying the evaluated methods to a national inventory of treatment facilities, we estimate that annual energy consumption ranged from 56.3 x 10^3 to 82.5 x 10^3 TJ in 2012 and 83.6 x 10^3 to 127 x 10^3 TJ in 2042. Our results indicate that not all estimation methods are suited for every use case, so we recommend that researchers and practitioners select an estimation method based on data availability and desired computational intensity.

Hodson, Abigayle↗

Toward a First-Principles Framework for Predicting Collective Properties of Electrolytes

Conspectus Given the universal importance of electrolyte solutions, it is natural to expect that we have a nearly complete understanding of the fundamental properties of these solutions (e.g., the chemical potential) and that we can therefore explain, predict, and control the phenomena occurring in them. In fact, reality falls short of these expectations. But, recent advances in the simulation and modeling of electrolyte solutions indicate that it should soon be possible to make progress toward these goals. In this Account, we will discuss the use of first-principles interaction potentials based in quantum mechanics (QM) to enhance our understanding of electrolyte solutions. Specifically, we will focus on the use of quantum density functional theory (DFT) combined with molecular dynamics simulation (DFT-MD) as the foundation for our approach. The overarching concept is to understand and accurately reproduce the balance between local or short-ranged (SR) structural details and long-range (LR) correlations, allowing the prediction of the thermodynamics of both single ions in solution as well as the collective interactions characterized by activity/osmotic coefficients. In doing so, relevant collective motions and driving forces characterized by chemical potentials can be determined. Here, in this Account, we will make the case that understanding electrolyte solutions requires a faithful QM representation of the SR nature of the ion–ion, ion–water, and water–water interactions. However, the number of molecules that is required for collective behavior makes the direct application of high-level QM methods that contain the best SR physics untenable, making methods that balance accuracy and efficiency a practical goal. Alternatives such as continuum solvent models (CSMs) and empirically based classical molecular dynamics have been extensively employed to resolve this problem but without yet overcoming the fundamental issue of SR accuracy. We will demonstrate that accurately describing the SR interaction is imperative for predicting both intrinsic properties, namely, at infinite dilution, and collective properties of electrolyte solutions. DFT has played an important role in our understanding of condensed phase systems, e.g., bulk liquid water, the air–water interface, ions in bulk, and at the air–water interface. This approach holds huge promise to provide benchmark calculations of electrolyte solution properties that will allow for the development and improvement of more efficient methods, as well as an enhanced understanding of fundamental phenomena. However, the standard protocol using the generalized gradient approximation with van der Waals (vdW) correction requires improvement in order to achieve a high level of quantitative accuracy. Simply simulating with higher level DFT functionals may not be the best route considering the significant computational cost. Alternative methods of incorporating information from higher levels of QM should be explored; e.g., using force matching techniques on small clusters, where high level benchmark calculations are possible, to develop ideal correction terms to the DFT functional is a promising possibility. We argue that DFT with statistical mechanics is becoming an increasingly useful framework enabling the prediction of collective electrolyte properties.

Duignan, Timothy T.↗

Operation and Maintenance of PV Systems: Data Science, Analysis, and Standards

This effort improves the effectiveness and reduce uncertainty in O&M cost through four primary objectives/tasks: 1) institutionalize standards for reliability and availability reporting for large PV power plants; 2) bridge systemic O&M knowledge gaps around important topics affecting O&M; 3) characterize systemic failure modes and patterns and accelerate O&M experiential learning cycles using field data; and 4) establish a baseline understanding of UPVS O&M cost drivers. Key results of this effort include publication of IEC standards, published topical papers on O&M topics, training, and characterize field data for climate- and service-related patterns (additional details below). Integrating these results serves to reduce performance risk and facilitate improvement in the way solar projects are operated and maintained. Results are well received and two publications are among the most successful SETO publications at NREL ("Model of Operation and Maintenance Costs for Photovoltaic Systems with over 40,000 downloads and "Best Practices in Operation and Maintenance of PV Systems, 3rd Ed." with over 90,000 downloads).

14 SOLAR ENERGY↗

Let Each Quantum Bit Choose Its Basis Gates

Near-term quantum computers are primarily limited by errors in quantum operations (or gates) between two quantum bits (or qubits). A physical machine typically provides a set of basis gates that include primitive 2-qubit (2Q) and 1-qubit (1Q) gates that can be implemented in a given technology. 2Q entangling gates, coupled with some 1Q gates, allow for universal quantum computation. In superconducting technologies, the current state of the art is to implement the same 2Q gate between every pair of qubits (typically an XX-or XY-type gate). This strict hardware uniformity requirement for 2Q gates in a large quantum computer has made scaling up a time and resource-intensive endeavor in the lab. We propose a radical idea – allow the 2Q basis gate(s) to differ between every pair of qubits, selecting the best entangling gates that can be calibrated between given pairs of qubits. This work aims to give quantum scientists the ability to run meaningful algorithms with qubit systems that are not perfectly uniform. Scientists will also be able to use a much broader variety of novel 2Q gates for quantum computing. We develop a theoretical framework for identifying good 2Q basis gates on “nonstandard” Cartan trajectories that deviate from “standard” trajectories like XX. We then introduce practical methods for calibration and compilation with nonstandard 2Q gates, and discuss possible ways to improve the compilation. To demonstrate our methods in a case study, we simulated both standard XY-type trajectories and faster, nonstandard trajectories using an entangling gate architecture with far-detuned transmon qubits. We identify efficient 2Q basis gates on these nonstandard trajectories and use them to compile a number of standard benchmark circuits such as QFT and QAOA. Furthermore, our results demonstrate an 8x improvement over the baseline 2Q gates with respect to speed and coherence-limited gate fidelity.

quantum computing↗

Pilot Study for Multifamily Building Ventilation and Indoor Air Quality

Weatherization Program Notice (WPN) 17-7 issued by the US Department of Energy (DOE) Weatherization Assistance Program (WAP) requires that buildings have ventilation in accordance with ASHRAE Standard 62.2-2016 (entitled Ventilation and Indoor Air Quality in Residential Buildings) in dwelling units weatherized under the program. The 2016 version of the standard expanded its scope of application to include all multifamily dwelling units. This has resulted in concerns for buildings where installing ventilation in individual units is costly or otherwise logistically difficult. Also, excessive ventilation rates could significantly increase energy costs, and may cause indoor air quality issues within the buildings. One deficiency that is noted is that the standard does not provide a credit for existing infiltration in multifamily buildings that reduces the required mechanical ventilation levels. This report details findings from a field study investigating envelope air-tightness, inter-unit connectivity, and indoor air quality in centrally ventilated high-rise multifamily buildings with central ventilation systems serving individual units in the state of New York. As allowed under WPN 17-7, the State of New York has a variance in the application of ASHRAE Standard 62.2-2016 in select types of multifamily buildings to provide time to determine how best to implement the standard. The purpose of this pilot study is to characterize the impact that weatherization and feasible ventilation improvements have on the indoor air quality of large, multifamily buildings with centrally ventilated apartments, as currently performed under WAP in the State of New York under their variance request (i.e., to implement ASHRAE Standard 62.2-2016 “to the greatest extent possible” in this type of multifamily building). A major goal is to determine if these practices improve or at least “do no harm” to the indoor air quality of the weatherized multifamily buildings and to the occupants themselves.

32 ENERGY CONSERVATION, CONSUMPTION, AND UTILIZATI↗

Cybersecurity Considerations for Hydrogen Infrastructure in Airport Environments

This report explores key cybersecurity concerns and best practices within environments that serve as reference points for the development of hydrogen fueling infrastructure for aviation. This cybersecurity analysis leverages prior NREL studies: 1) hydrogen fueling station component validation to identify vulnerabilities and failure events documented in physical equipment, and 2) electric aircraft charging infrastructure analysis to explore primary cybersecurity vulnerabilities. It reviews the criticality of digitized technologies in sustaining hydrogen fuel production, storage, and fueling systems, noting cybersecurity concerns that are universal to power systems and industrial control systems in general. In considering cybersecurity vulnerabilities within a future landscape of hydrogen energy for aviation applications, a reference architecture was intended to reveal the points of connection between assets and the potential sensors that are vulnerable to manipulation in the event of compromised access or communication within a SCADA system. A generalized reference architecture can help stakeholders, engineers, or strategists understand connections, criticalities, and standard practices when it comes to designing and planning for new systems. There are several gaps to account for in assessing the future of hydrogen production, storage, and fueling for aviation. Engaging stakeholders, including aircraft manufacturers, electric utilities, site property owners, and local communities, will inform decision-making around site structure, operations, and resources for future hydrogen fueling infrastructure to understand operational needs and cybersecurity awareness. Cybersecurity mitigation strategy must consider physical attack vectors that emerge with the integration of hydrogen systems into existing airport security requirements. The cybersecurity risk assessment contained in this report is an entry point into potential future granular-level analyses to be conducted as part of hazard and risk assessments for safe aviation hydrogen infrastructure, determining how the scale of hydrogen fuel infrastructure for aviation impacts the volume of cyber attack vectors, and what, if any, are the vulnerabilities associated with different types of on-board hydrogen systems. In this nascent development phase, assessing how best to integrate cybersecurity practices into an evolving U.S. aviation landscape provides critical insights into building increased awareness and stakeholder engagement to support a cyber-resilient infrastructure.

08 HYDROGEN↗

Performance Assessments of Demand Flexibility from Grid-Interactive Efficient Buildings: Issues and Considerations

This SEE Action Network report explains basic concepts and fundamental considerations for assessing the actual demand flexibility performance of buildings participating in demand flexibility programs and responding to time-varying retail rates. Demand flexibility is the capability of distributed energy resources (DERs) to adjust a building’s load profile across different timescales. Assessments determine the timing, location, quantity, and quality of grid services provided. The results can be used for financial settlements and to improve performance of demand flexibility, support its consideration in resource potential studies and electricity system planning, and contribute to cost-effectiveness evaluations. While practitioners and regulators regularly find opportunities to improve performance assessments of demand-related services, to a large degree current best practices are sufficient for basic service offerings as demand flexibility is implemented today. However, advances in assessment practices will be required in a future with grid-interactive efficient buildings (GEBs) that provide continuous demand flexibility by integrating multiple DERs and flexibility modes (load shed, load shift, modulate, and generate). Example practices include using new baseline constructs—including whether baselines are even required for certain building flexibility modes or configurations, deploying more advanced metering and analytics, further developing cybersecurity standards, improving communication standards for increased interoperability, and establishing performance metrics and assessment procedures for load modulation as it is more fully defined and implemented. This report provides information on prioritizing and designing performance assessment elements for demand flexibility programs and time-varying retail rates, assessment protocols, and research and development needs. Additional research sponsored by DOE’s Building Technologies Office offers more detailed technical information on assessing performance of demand flexibility, including definition of performance metrics.

24 POWER TRANSMISSION AND DISTRIBUTION↗

Recommended Functionalities for Improving Cybersecurity of Distributed Energy Resources: Preprint

The legacy electric grid is transitioning into a 'present' modern grid due to increasing penetration of intermittent renewable generation at the distribution side, also known as distributed energy resources (DERs). Monitoring and control of such DERs requires extensive data-exchange and bidirectional communication networks. This bidirectional communication paves the way to cyber vulnerabilities and risks for new kinds of cyber-attacks that may have destructive impacts on power system operations. Since IEEE Std. 1547-2018 does not discuss cybersecurity measures for DERs, cybersecurity controls should be developed for securing DER systems at all three levels: device level, communications level, and applications level. This paper discusses the current industry's best practices related to DER cybersecurity and proposes recommended functionalities for improving the cybersecurity posture of DERs. These practical recommended functionalities have been discussed and verified with the industry through a DER cybersecurity working group and are meant to improve the device level security of DERs.

24 POWER TRANSMISSION AND DISTRIBUTION↗

Microbiome data management in action workshop: Atlanta, GA, USA, June 12–13, 2024

Microbiome research is revolutionizing human and environmental health, but the value and reuse of microbiome data are significantly hampered by the limited development and adoption of data standards. While several ongoing efforts are aimed at improving microbiome data management, significant gaps still remain in terms of defining and promoting adoption of consensus standards for these datasets. The Strengthening the Organization and Reporting of Microbiome Studies (STORMS) guidelines for human microbiome research have been endorsed and successfully utilized by many research organizations, publishers, and funding agencies, and have been recognized as a consensus community standard. No equivalent effort has occurred for environmental, synthetic, and non-human host-associated microbiomes. To address this growing need within the microbiome research community, we convened the Microbiome Data Management in Action Workshop (June 12–13, 2024, in Atlanta, GA, USA), to bring together key decision makers in microbiome science including researchers, publishers, funders, and data repositories. The 50 attendees, representing the diverse and interdisciplinary nature of microbiome research, discussed recent progress and challenges, and brainstormed actionable recommendations and paths forward for coordinated environmental microbiome data management and the modifications necessary for the STORMS guidelines to be applied to environmental, non-human host, and synthetic microbiomes. The outcomes of this workshop will form the basis of a formalized data management roadmap to be implemented across the field. These best practices will drive scientific innovation now and in years to come as these data continue to be used not only in targeted reanalyses but in large-scale models and machine learning efforts.

54 ENVIRONMENTAL SCIENCES↗