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At least 199 records · Page 11

Axion-gauge coupling quantization with a twist

The possible couplings of an axion to gauge fields depend on the global structure of the gauge group. If the Standard Model gauge group is minimal, or equivalently if fractionally charged color-singlet particles are forbidden, then the QCD axion’s Chern-Simons couplings to photons and gluons obey correlated quantization conditions. Specifically, the photon coupling can have a fractional part which is a multiple of 1/3, but which is determined by the gluon coupling. A consequence of this result is that, among all theories with a minimal gauge group and minimal axion coupling to gluons, the smallest possible axion-photon amplitude |g aγγ | arises for E/N = 8/3. This provides a new motivation for experiments targeting this axion-photon coupling.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗

Photochemical spin-state control of binding configuration for tailoring organic color center emission in carbon nanotubes

Abstract Incorporating fluorescent quantum defects in the sidewalls of semiconducting single-wall carbon nanotubes (SWCNTs) through chemical reaction is an emerging route to predictably modify nanotube electronic structures and develop advanced photonic functionality. Applications such as room-temperature single-photon emission and high-contrast bio-imaging have been advanced through aryl-functionalized SWCNTs, in which the binding configurations of the aryl group define the energies of the emitting states. However, the chemistry of binding with atomic precision at the single-bond level and tunable control over the binding configurations are yet to be achieved. Here, we explore recently reported photosynthetic protocol and find that it can control chemical binding configurations of quantum defects, which are often referred to as organic color centers, through the spin multiplicity of photoexcited intermediates. Specifically, photoexcited aromatics react with SWCNT sidewalls to undergo a singlet-state pathway in the presence of dissolved oxygen, leading to ortho binding configurations of the aryl group on the nanotube. In contrast, the oxygen-free photoreaction activates previously inaccessible para configurations through a triplet-state mechanism. These experimental results are corroborated by first principles simulations. Such spin-selective photochemistry diversifies SWCNT emission tunability by controlling the morphology of the emitting sites.

36 MATERIALS SCIENCE↗

Rheological and Structural Properties of k‐Carrageenan/Xanthan Gum Gummies Architected With a New Natural Additive

ABSTRACT Biohybrids (BHs)based on bentonite and anthocyanins can be produced as alternatives to synthetic colorants. However, no information is available on the interaction of biohybrid with food system. This research studies the rheological properties of gummies containing k‐carrageenan and xanthan gum incorporated with a BH. The incorporation of BH (≤ 2% w/w) increased the flow consistency index and shear thinning effect in melted gummies at 85°C. During cooling from 90°C to 25°C, the presence of BH altered the sol–gel transition temperature typical in carrageenan systems, probably by the formation of carrageenan complexes. At 25°C, all gummies had a solid‐like response with elastic modulus ( G ') higher than viscous modulus ( G "). G ' values increased linearly with BH concentration, and the linear viscoelastic region and breaking strain decreased with BH concentration, indicating that this natural additive acted as a reinforcing material.

Valencia, German Ayala [Department of Chemical and↗

Metallic and porous Ti nanorod arrays for visible-IR light absorption and dendrite-free stable lithium-metal batteries

It is still a challenging task to prepare highly porous nanorod arrays of metals formed on substrates for optical and energy storage applications. Herein, we demonstrate the design and synthesis of black color, metallic and highly porous Ti nanorod arrays as novel current collectors for dendrite-free and highly stable Li-metal anodes. The high porosity of metallic nanorod arrays provides numerous heterogeneous nucleation sites and huge contact area and large space for the accommodation of Li metal. The conductive metallic Ti nanorod arrays enhance electrode integration. Effectively, it eliminates formation Li dendrites and demonstrates superior cycling stability over 300 cycles. Additionally, the unique porous structures of the nanorod arrays can decrease the amplitude of forced vibration in narrow space leading to light absorption. Interestingly, the metal is black instead of metallic color. The black metallic nanorod arrays can absorb more than 96% of both visible and infra-red lights. Furthermore, this black color metallic porous nanorod arrays may find additional applications in aerospace, energy, biomedical, defence, and chemical industries.

25 ENERGY STORAGE↗

Ultracentral Collisions of Small and Deformed Systems at RHIC

We study a range of collision systems involving deformed ions and compare the elliptic and triangular flow harmonics produced in a hydrodynamics scenario versus a color glass condensate (CGC) scenario. For the hydrodynamics scenario, we generate initial conditions using TRENTO and work within a linear response approximation to obtain the final flow harmonics. For the CGC scenario, we use the explicit calculation of two-gluon correlations taken in the high-p T “(semi)dilute-(semi)dilute” regime to express the flow harmonics in terms of the density profile of the collision. Here, we consider ultracentral collisions of deformed ions as a testbed for these comparisons because the difference between tip-on-tip and side-on-side collisions modifies the multiplicity dependence in both scenarios, even at zero impact parameter. We find significant qualitative differences in the multiplicity dependence obtained in the initial conditions+hydrodynamics scenario and the CGC scenario, allowing these collisions of deformed ions to be used as a powerful discriminator between models. We also find that sub-nucleonic fluctuations have a systematic effect on the elliptic and triangular flow harmonics which are most discriminating in 0–1% ultracentral symmetric collisions of small deformed ions and in 0–10% d197Au collisions. The collision systems we consider are 238 U 238 U, d 197 Au, 9 Be 197 Au, 9 Be 9 Be, 3 He 3 He, and 3 He 197 Au.

73 NUCLEAR PHYSICS AND RADIATION PHYSICS↗

Revealing core-valence interactions in solution with femtosecond X-ray pump X-ray probe spectroscopy

Abstract Femtosecond pump-probe spectroscopy using ultrafast optical and infrared pulses has become an essential tool to discover and understand complex electronic and structural dynamics in solvated molecular, biological, and material systems. Here we report the experimental realization of an ultrafast two-color X-ray pump X-ray probe transient absorption experiment performed in solution. A 10 fs X-ray pump pulse creates a localized excitation by removing a 1 s electron from an Fe atom in solvated ferro- and ferricyanide complexes. Following the ensuing Auger–Meitner cascade, the second X-ray pulse probes the Fe 1 s → 3 p transitions in resultant novel core-excited electronic states. Careful comparison of the experimental spectra with theory, extracts +2 eV shifts in transition energies per valence hole, providing insight into correlated interactions of valence 3 d with 3 p and deeper-lying electrons. Such information is essential for accurate modeling and predictive synthesis of transition metal complexes relevant for applications ranging from catalysis to information storage technology. This study demonstrates the experimental realization of the scientific opportunities possible with the continued development of multicolor multi-pulse X-ray spectroscopy to study electronic correlations in complex condensed phase systems.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗

Real-Time Identification of Oxygen Vacancy Centers in LiNbO 3 and SrTiO 3 during Irradiation with High Energy Particles

Oxygen vacancies are known to play a central role in the optoelectronic properties of oxide perovskites. A detailed description of the exact mechanisms by which oxygen vacancies govern such properties, however, is still quite incomplete. The unambiguous identification of oxygen vacancies has been a subject of intense discussion. Interest in oxygen vacancies is not purely academic. Precise control of oxygen vacancies has potential technological benefits in optoelectronic devices. In this review paper, we focus our attention on the generation of oxygen vacancies by irradiation with high energy particles. Irradiation constitutes an efficient and reliable strategy to introduce, monitor, and characterize oxygen vacancies. Unfortunately, this technique has been underexploited despite its demonstrated advantages. This review revisits the main experimental results that have been obtained for oxygen vacancy centers (a) under high energy electron irradiation (100 keV–1 MeV) in LiNbO 3 , and (b) during irradiation with high-energy heavy (1–20 MeV) ions in SrTiO 3 . In both cases, the experiments have used real-time and in situ optical detection. Moreover, the present paper discusses the obtained results in relation to present knowledge from both the experimental and theoretical perspectives. Our view is that a consistent picture is now emerging on the structure and relevant optical features (absorption and emission spectra) of these centers. One key aspect of the topic pertains to the generation of self-trapped electrons as small polarons by irradiation of the crystal lattice and their stabilization by oxygen vacancies. What has been learned by observing the interplay between polarons and vacancies has inspired new models for color centers in dielectric crystals, models which represent an advancement from the early models of color centers in alkali halides and simple oxides. The topic discussed in this review is particularly useful to better understand the complex effects of different types of radiation on the defect structure of those materials, therefore providing relevant clues for nuclear engineering applications.

36 MATERIALS SCIENCE↗

Hybrid quantum nanophotonic devices with color centers in nanodiamonds [Invited]

Optically active color centers in nanodiamonds offer unique opportunities for generating and manipulating quantum states of light. These mechanically, chemically, and optically robust emitters can be produced in mass quantities, deterministically manipulated, and integrated with a variety of quantum device geometries and photonic material platforms. Nanodiamonds with deeply sub-wavelength sizes coupled to nanophotonic structures feature a giant enhancement of light-matter interaction, promising high bitrates in quantum photonic systems. We review the recent advances in controlled techniques for synthesizing, selecting, and manipulating nanodiamond-based color centers for their integration with quantum nanophotonic devices.

Sahoo, Swetapadma (ORCID:0000000179281391)↗

Extraction of Deep Inelastic Cross Sections Using a 10.4 GeV Electron Beam and a Polarized Helium-3 Target

Experiment E12-06-121 at Jefferson Lab aims to do a precision measurement of the neutron spin structure function g2 using inclusive inelastic scattering of electrons over a large kinematic range of x and Q2. The third moment of the linear combination of the spin structure functions g1 and g2, d2, is one of the cleanest higher twist observables and contains information on quark-gluon correlations. It is connected to the \color polarizability or \color Lorentz force" of the nucleon. The experimental data taking was successfully conducted in Hall C using a longitudinally polarized electron beam with 10.4 GeV energy, and a polarized 3He gas target. The combination of the Super High Momentum Spectrometer (SHMS) and the High Momentum Spectrometer (HMS) allowed us to run the experiment for three constant Q2 values (3.0, 4.3, and 5.6 GeV2/c2) over a wide range of x (0:20 < x < 0:95) for the ?first time. To extract the neutron spin structure functions, precision determination of the unpolarized cross-sections and double spin asymmetries are required. The analysis of the deep inelastic scattering data and the results from the ?first measurements of unpolarized 3He cross-sections are reported in this work. The extracted cross-sections will be combined with the electron asymmetry results (ongoing work) to obtain the g2 and d2 of 3He. Finally, nuclear correction to the 3He results will have to be applied to extract g2 and d2 for the neutrons.

Roy, Murchhana↗

Seed coat transcriptomic profiling of 5-593, a genotype important for genetic studies of seed coat color and patterning in common bean ( Phaseolus vulgaris L.)

Common bean (Phaseolus vulgaris L.) market classes have distinct seed coat colors, which are directly related to the diverse flavonoids found in the mature seed coat. To understand and elucidate the molecular mechanisms underlying the regulation of seed coat color, RNA-Seq data was collected from the black bean 5-593 and used for a differential gene expression and enrichment analysis from four different seed coat color development stages. 5-593 carries dominant alleles for 10 of the 11 major genes that control seed coat color and expression and has historically been used to develop introgression lines used for seed coat genetic analysis. Pairwise comparison among the four stages identified 6,294 differentially expressed genes (DEGs) varying from 508 to 5,780 DEGs depending on the compared stages. Kyoto Encyclopedia of Genes and Genomes (KEGG) enrichment analysis revealed that phenylpropanoid biosynthesis, flavonoid biosynthesis, and plant hormone signal transduction comprised the principal pathways expressed during bean seed coat pigment development. Transcriptome analysis suggested that most structural genes for flavonoid biosynthesis and some potential regulatory genes were significantly differentially expressed. Further studies detected 29 DEGs as important candidate genes governing the key enzymatic flavonoid biosynthetic pathways for common bean seed coat color development. Additionally, four gene models, Pv5-593.02G016100, 593.02G078700, Pv5-593.02G090900, and Pv5-593.06G121300, encode MYB-like transcription factor family protein were identified as strong candidate regulatory genes in anthocyanin biosynthesis which could regulate the expression levels of some important structural genes in flavonoid biosynthesis pathway. These findings provide a framework to draw new insights into the molecular networks underlying common bean seed coat pigment development.

60 APPLIED LIFE SCIENCES↗

Alternatives to Contour Visualizations for Power Systems Data

Electrical grids are geographical and topological structures whose voltage states are challenging to represent accurately and efficiently for visual analysis. The current common practice is to use colored contour maps, yet these can misrepresent the data. We examine the suitability of four alternative visualization methods for depicting voltage data in a geographically dense distribution system - Voronoi polygons, H3 tessellations, S2 tessellations, and a network-weighted contour map. We find that Voronoi tessellations and network-weighted contour maps more accurately represent the statistical distribution of the data than regular contour maps.

MATHEMATICS AND COMPUTING,POWER TRANSMISSION AND D↗

Reflectin: Protein Driver of Dynamically Tunable Biophotonics; New Paradigm for Tunably Reconfigurable Materials

We discovered that the reflectins, with architecture and sequences unlike those of any other proteins known, exhibit a novel interplay between signal-controlled nucleation and growth of dynamically arrested liquid-liquid phase-segregated assemblies that uniquely enables the continuous and precise fine-tuning of physical properties governing the color and brightness of light reflected from the membrane-enclosed nanostructures that contain them. Our research included high-resolution structural analyses conducted at the DOE-BES user facilities of the Stanford Synchrotron Light Source and LBL National Laboratory’s Molecular Foundry, leveraging their capabilities for time-resolved SAXS and cryo-TEM with our ongoing genetic engineering, biophysical and computational analyses to identify the structural determinants and mechanisms governing the dynamic behaviors of the reflectins. We augmented these methods with EPR analyses that revealed for the first time the existence of a specific pathway of reflectin assembly. Using dynamic light scattering and continuously monitored circular dichroism and Raman microscopy, we elucidated the progression of structural changes underlying the mechanisms of signal-induced condensation, folding, assembly, liquefaction, dynamic arrest, regulation and reversal.

59 BASIC BIOLOGICAL SCIENCES↗

Alternatives to Contour Visualizations for Power Systems Data

Electrical grids are geographical and topological structures whose voltage states are challenging to represent accurately and efficiently for visual analysis. The current common practice is to use colored contour maps, yet these can misrepresent the data. We examine the suitability of four alternative visualization methods for depicting voltage data in a geographically dense distribution system-Voronoi polygons, H3 tessellations, S2 tessellations, and a network-weighted contour map. We find that Voronoi tessellations and network-weighted contour maps more accurately represent the statistical distribution of the data than regular contour maps.

MATHEMATICS AND COMPUTING↗

CoLoRe-2LPT: Lyman-$α$ mock catalogues for the validation of DESI cosmological analyses

The Lyman-$α$ (Ly$α$) forest has become a crucial probe for studying the large-scale structure of the universe at high redshift ($z > 2$), providing powerful constraints on Baryon Acoustic Oscillations (BAO) and the full-shape (FS) clustering of matter. As a key ingredient for upcoming BAO and FS analyses, we present a new generation of fast cosmological Ly$α$ mocks based on second-order Lagrangian perturbation theory (2LPT). These new mocks significantly improve upon previous log-normal approaches, both at accurately capturing small scale clustering and at recovering the non-linear broadening of the BAO peak. They are able to reproduce Ly$α$ statistics within $10\%$ of the latest DESI measurement; including the Ly$α$ bias and the redshift-space distortion $β$ parameter, mean transmitted flux, and 1D power spectrum. The corresponding quasar (QSO) clustering is also improved with respect to previous approaches, calibrated against high-resolution Abacus simulations, recovering the observational QSO linear bias to less than $5\%$ and improving redshift-space distortions via 2LPT velocities and the addition of Fingers-of-God effects. Furthermore, these mocks incorporate high column density systems and metal lines, allowing us to explore the effects and systematics induced by these astrophysical contaminants. This new set of mocks has been key for enhancing the modeling and validation of the DESI DR2 Ly$α$ full shape cosmological analysis. This work provides a physically motivated and computationally efficient tool for simulating current and next-generation Ly$α$ surveys and validating FS and BAO analysis.

Bernal, M.F. Ruiz-Herrera [Madrid, CIEMAT] (ORCID:↗

Investigation and Expression Analysis of R2R3-MYBs and Anthocyanin Biosynthesis-Related Genes during Seed Color Development of Common Bean ( Phaseolus vulgaris )

Anthocyanins are responsible for the coloration of common bean seeds, and their accumulation is positively correlated with the expression level of anthocyanin biosynthetic genes. The MBW (MYB-bHLH-WD40) complex is thought to regulate the expression of these genes, and MYB proteins, which are a key factor in activating anthocyanin pathway genes, have been identified in several plants. This study demonstrated gene structures, chromosomal placements, gene duplications of R2R3-MYBs, miRNAs associated with R2R3-MYBs, and the interaction of these genes with other flavonoid regulatory genes. qRT-PCR was used to investigate the role of specific R2R3-MYBs and flavonoid genes in common bean seed color development. As a result of a comprehensive analysis with the help of in silico tools, we identified 160 R2R3-MYB genes in the common bean genome. We divided these genes into 16 classes on the basis of their intron-exon and motif structures. Except for three, the rest of the common bean R2R3-MYB members were distributed to all chromosomes with different densities, primarily located on chromosomes 3 and 8. We identified a total of 44 duplicated gene pairs dispersed across 11 chromosomes and evolved under purifying selection (Ka/Ks < 1), 19 of which were derived from a whole-genome duplication. Our research uncovered 25 putative repressor PvMYB proteins that contain the EAR motif. Additionally, fifty different cis-regulatory elements regulated by light, stress, and hormone were identified. Within the genome of the common bean, we discovered a total of 36 microRNAs that target a total of 72 R2R3-MYB transcripts. The effect of 16 R2R3-MYB genes and 16 phenylpropanoid pathway genes, selected on the basis of their interaction in the protein-protein interaction map, playing role in the regulation of seed coat color development was evaluated using qRT-PCR in 5 different tissues at different developmental stages. The results revealed that these specific genes have different expression levels during different developmental periods, with higher levels in the pod filling and early pod stages than in the rest of the developmental periods. Furthermore, it was shown that PvTT8 (bHLH), PvTT2 (PvMYB42), PvMYB113, PvTTG1, and PvWD68 genes have effects on the regulation of seed coat color. The findings of this study, which is the first to use whole-genome analysis to identify and characterize the R2R3-MYB genes in common bean, may serve as a reference for future functional research in the legume.

59 BASIC BIOLOGICAL SCIENCES↗

Estimating the color lifetime of energetic quarks

Using a simple geometric framework with a realistic nuclear density distribution, we fit published HERMES data to determine fundamental properties of hadronization using the nuclear medium as a spatial analyzer. Our approach uses a fit to the transverse momentum broadening observable and the hadronic multiplicity ratio; the simultaneous fit to two different observables strongly constrains the outcome. Using the known sizes of the target nuclei, we extract the color lifetime, finding a z h -dependent range of values from 2 to 8 fm/c for these data. We also extract estimates for the qˆ transport coefficient characterizing the strength of the interaction between the quark and the cold nuclear medium, finding an average value of 0.035±0.011 GeV 2 /fm. With a three-parameter model we obtain satisfactory fits to the data with a goodness-of-fit parameter χ 2 /dof of 1.1 or less. In a secondary fit of the results from that model we independently find a value for the Lund String Model string tension of 1.00±0.05 GeV/fm. We evaluated the sensitivity for extracting quark energy loss and effective in-medium hadronic cross sections using four-parameter variants of the model, finding large uncertainties in both cases. Our results suggest that hadronic interaction of forming hadrons in the nuclear medium is the primary dynamical cause of meson attenuation in the HERMES data, with quark energy loss playing a more minor role.

Electron-ion collider↗

Data Driven Correlated Noise Simulation for the ICEBERG LArTPC

Accurate electronic-noise simulation is essential for low-energy physics in liquid-argon TPCs. More realistic noise modeling allows us to better tune reconstruction algorithms and more reliably assess and optimize signal-detection thresholds. We present a data-driven noise simulation framework developed for the ICEBERG test stand for DUNE that generates synthetic noise waveforms that reproduce both (i) the measured per-channel magnitude of the Fast Fourier Transform (FFT) and (ii) frequency-dependent channel-to-channel correlations observed in ICEBERG noise data. Using a dedicated noise-only dataset, we build a compact noise model containing per-channel FFT-magnitude targets together with a small set of band-wise cross-wire color matrices. White noise is generated in the frequency domain by drawing circular-symmetric complex Gaussian coefficients with random phases and scaling them to match the measured FFT-magnitude targets, and cross-wire correlations are subsequently imposed using the stored color matrices. The model and algorithm were integrated into the LArSoft + Wire-Cell Toolkit simulation chain and validated by comparing waveform structure, frequency-domain spectra, and band-limited correlation matrices from simulated noise and ICEBERG data. This approach can be extended to other LArTPC operating conditions.

Ghosh, Avik [Iowa State U.]↗