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DOE OSTI2026

ProtoDUNE-VD for Beyond the Standard Model Searches: Initial Studies and Future Prospects

The Deep Underground Neutrino Experiment (DUNE) is a next-generation long-baseline neutrino program designed to address fundamental questions in neutrino and astroparticle physics. ProtoDUNE, operating at the CERN Neutrino Platform, serves as a full-scale prototype for the DUNE Far Detector. In particular, the ProtoDUNE Vertical Drift (ProtoDUNE-VD) detector provides a powerful testbed for validating reconstruction and event selection techniques for future DUNE operations. In addition to detector R&D, ProtoDUNE enables a novel parasitic beam-dump search for beyond-the-Standard-Model (BSM) particles. However, it faces several challenges. Most notably, the ProtoDUNE-VD modules operate on the surface and are consequently exposed to an intense flux of cosmic rays, which requires a dedicated trigger. In addition, standard neutrinos are also produced in the T2 target area from the decay of unstable mesons, constituting a relevant background, which needs to be well understood and characterized a priori. We present the first studies based on 2025 data taken with a trigger designed to identify neutrino candidates at ProtoDUNE-VD. ProtoDUNE-VD’s high-resolution LArTPC imaging allows detailed reconstruction of decay and scattering signatures. This work demonstrates the complementarity of traditional tools such as Pandora and modern machine-learning approaches, providing key input for atmospheric neutrino and rare-event searches in the DUNE Vertical Drift program.

Bagdu, Halit [U. Iowa, Iowa City]↗
DOE OSTI2026

Wasserstein Normalized Autoencoder for Anomaly Detection in ProtoDUNE Vertical-Drift Detector

ProtoDUNE Vertical Drift needs a selective triggering algorithm. The detector sits on Earth's surface, so cosmic activity dominates its data. Our goal in this paper is to trigger on neutrino events more robustly than the current deployed Analog-to-Digital Converter Simple Window (ADCSW) model and, eventually, search for signals of Beyond Standard Model (BSM) physics at DUNE as our ultimate North Star objective. As a step towards this goal, we evaluate a Wasserstein Normalized Autoencoder (WNAE) on simulated collection-plane only windows of shape $1\times10\times10$ where Neutrinos act as our BSM-proxy and Cosmic-ray Muons serve as our learned background. The network parameters are fitted using only cosmic-ray muon events as background in order to maintain an unsupervised pipeline. Training uses finite-step Langevin $x^-$ samples, positive-sample reconstruction energy, and an empirical sliced $2$-Wasserstein objective to learn a normalized Boltzmann energy model. We then calibrate on a nominal $5\,\mathrm{Hz}$ operating threshold calculated from cosmic validation data. Both WNAE and ADCSW accept 311 of 194,083 held-out cosmic background events at this $5\,\mathrm{Hz}$ threshold. We found that WNAE accepts 9,677 of 34,634 neutrino-proxy events $(27.9\pm0.24)\%$, compared with 10,076 $(29.1\pm0.24)\%$ for ADCSW, an observed WNAE-minus-ADCSW difference of $-1.15\%$. At another nominal $2\,\mathrm{Hz}$ target threshold, the corresponding efficiencies are $(20.5\pm0.22)\%$ and $(22.6\pm0.22)\%$, respectively. Of the WNAE-selected neutrino proxies at $5\,\mathrm{Hz}$, $(20.8\pm0.4)\%$ of the classified neutrino-proxy events are unique to WNAE, where the uncertainty is an absolute binomial standard error of $0.4\%$.

Zheng, Jake [U. Chicago (main)] (ORCID:00090002189↗
DOE OSTI2024

Dual-RNA-sequencing to elucidate the interactions between sorghum and Colletotrichum sublineola

In warm and humid regions, the productivity of sorghum is significantly limited by the fungal hemibiotrophic pathogen Colletotrichum sublineola , the causal agent of anthracnose, a problematic disease of sorghum ( Sorghum bicolor (L.) Moench) that can result in grain and biomass yield losses of up to 50%. Despite available genomic resources of both the host and fungal pathogen, the molecular basis of sorghum− C. sublineola interactions are poorly understood. By employing a dual-RNA sequencing approach, the molecular crosstalk between sorghum and C. sublineola can be elucidated. In this study, we examined the transcriptomes of four resistant sorghum accessions from the sorghum association panel (SAP) at varying time points post-infection with C. sublineola . Approximately 0.3% and 93% of the reads mapped to the genomes of C. sublineola and Sorghum bicolor , respectively. Expression profiling of in vitro versus in planta C. sublineola at 1-, 3-, and 5-days post-infection (dpi) indicated that genes encoding secreted candidate effectors, carbohydrate-active enzymes (CAZymes), and membrane transporters increased in expression during the transition from the biotrophic to the necrotrophic phase (3 dpi). The hallmark of the pathogen-associated molecular pattern (PAMP)-triggered immunity in sorghum includes the production of reactive oxygen species (ROS) and phytoalexins. The majority of effector candidates secreted by C. sublineola were predicted to be localized in the host apoplast, where they could interfere with the PAMP-triggered immunity response, specifically in the host ROS signaling pathway. The genes encoding critical molecular factors influencing pathogenicity identified in this study are a useful resource for subsequent genetic experiments aimed at validating their contributions to pathogen virulence. This comprehensive study not only provides a better understanding of the biology of C. sublineola but also supports the long-term goal of developing resistant sorghum cultivars.

Vela, Saddie↗
DOE OSTI2025

Urban Impacts on Convective Squall Lines over Chicago in the Warm Season—Part I: Observations of Multi-Scale Convective Evolution

In this study, our aim is to diagnose how two quasi-linear convective systems (QLCS) are organized so one can determine the possible role of the city of Chicago, IL, USA, in modifying convective precipitation systems. In this Part I of a two-part study, we employ large-scale analyses, radiosonde soundings, surface observations, and Doppler radar data to diagnose the precursor atmospheric circulations that organize the evolution of two mesoscale convective systems and compare those circulations to radar and precipitation. Several multi-scale processes are found that organize and modify convection over the Chicago metroplex. Two sequential quasi-linear convective systems (QLCS #1 and #2) were organized that propagated over Chicago, IL, USA, during an eight-hour period on 5–6 July 2018. The first squall line (QLCS #1) built from the southwest to the northeast while strengthening as it propagated over the city, and the second (QLCS #2) propagated southeastwards and weakened as it passed over the city in association with a polar cold front. The weak upper-level divergence associated with a diffluent flow poleward of an expansive ridge built over and strengthened a low-level trough and confluence zone, triggering QLCS #1. Convective downdrafts from QLCS #1 produced a cold pool that interacted with multiple confluent low-level jets surrounding and focused on the metroplex urban heat island, thus advecting the convection poleward over the metroplex. The heaviest precipitation occurred just south-southeast of Midway Airport, Chicago. Subsequently, a polar cold front propagated into the metroplex, which triggered QLCS #2. However, the descending air above it under the polar jet and residual cold pool from QLCS #1 rapidly dissipated the cold frontal convection. This represents a case study where very active convection built over the metroplex and was likely modified by it, as evidenced in numerical simulations to be described in Part II.

Kaplan, Michael L.↗
DOE OSTI2024

Kink Instability of Flux Ropes in Partially Ionized Plasmas

In the solar atmosphere, flux ropes are subject to current-driven instabilities that are crucial in driving plasma eruptions, ejections, and heating. A typical ideal magnetohydrodynamics instability developing in flux ropes is the helical kink, which twists the flux rope axis. The growth of this instability can trigger magnetic reconnection, which can explain the formation of chromospheric jets and spicules, but its development has never been investigated in a partially ionized plasma (PIP). Here, we study the kink instability in PIP to understand how it develops in the solar chromosphere, where it is affected by charge-neutral interactions. Partial ionization speeds up the onset of the nonlinear phase of the instability, as the plasma β of the isolated plasma is smaller than the total plasma β of the bulk. The distribution of the released magnetic energy changes in fully ionized plasma and PIP, with a larger increase in internal energy associated with the PIP cases. The temperature in PIP increases faster also due to heating terms from the two-fluid dynamics. PIP effects trigger kink instability on shorter time scales, which is reflected in more explosive chromospheric flux rope dynamics. These results are crucial to understanding the dynamics of small-scale chromospheric structures—minifilament eruptions—that thus far have been largely neglected but could significantly contribute to chromospheric heating and jet formation.

79 ASTRONOMY AND ASTROPHYSICS↗
DOE OSTI2025

GRB 221009A: The B.O.A.T. Burst that Shines in Gamma Rays

We present a complete analysis of Fermi Large Area Telescope (LAT) data of GRB 221009A, the brightest gamma-ray burst (GRB) ever detected. The burst emission above 30 MeV detected by the LAT preceded, by 1 s, the low-energy (<10 MeV) pulse that triggered the Fermi Gamma-Ray Burst Monitor (GBM), as has been observed in other GRBs. The prompt phase of GRB 221009A lasted a few hundred seconds. It was so bright that we identify a bad time interval of 64 s caused by the extremely high flux of hard X-rays and soft gamma rays, during which the event reconstruction efficiency was poor and the dead time fraction quite high. The late-time emission decayed as a power law, but the extrapolation of the late-time emission during the first 450 s suggests that the afterglow started during the prompt emission. We also found that high-energy events observed by the LAT are incompatible with synchrotron origin, and, during the prompt emission, are more likely related to an extra component identified as synchrotron self-Compton (SSC). A remarkable 400 GeV photon, detected by the LAT 33 ks after the GBM trigger and directionally consistent with the location of GRB 221009A, is hard to explain as a product of SSC or TeV electromagnetic cascades, and the process responsible for its origin is uncertain. Because of its proximity and energetic nature, GRB 221009A is an extremely rare event.

79 ASTRONOMY AND ASTROPHYSICS↗
DOE OSTI2024

Effects of Dust Coagulation on Streaming Instability

Abstract Streaming instability (SI) in dust has long been thought to be a promising process in triggering planetesimal formation in the protoplanetary disks (PPDs). In this study, we present the first numerical investigation that models the SI in the vertically stratified disk together with the dust coagulation process. Our simulations reveal that, even with the initially small dust sizes, because dust coagulation promotes dust size growth, SI can eventually still be triggered. Specifically, dust coagulation, limited only by dust fragmentation, broadens the parameter boundaries obtained from previous SI studies using single dust species. We describe the various stages of dust dynamics along with their size evolution and explore the impact of different dust fragmentation velocities. Implications of these results for realistic PPDs are also discussed.

79 ASTRONOMY AND ASTROPHYSICS↗
DOE OSTI2025

Conceptual Design Report for the MATHUSLA Long-Lived Particle Detector near CMS

We present the Conceptual Design Report (CDR) for the MATHUSLA (MAssive Timing Hodoscope for Ultra-Stable neutraL pArticles) long-lived particle detector at the HL-LHC, covering the design, fabrication and installation at CERN Point 5. MATHUSLA is a 40 m-scale detector with an air-filled decay volume that is instrumented with scintillator tracking detectors, to be located near CMS. Its large size, close proximity to the CMS interaction point and about 100 m of rock shielding from HL-LHC backgrounds allows it to detect LLP production rates and lifetimes that are one to two orders of magnitude beyond the ultimate sensitivity of the HL-LHC main detectors for many highly motivated LLP signals. Data taking is projected to commence with the start of HL-LHC operations. We present a new 40m design for the detector: its individual scintillator bars and wavelength-shifting fibers, their organization into tracking layers, tracking modules, tower modules and the veto detector; define a high-level design for the supporting electronics, DAQ and trigger system, including supplying a hardware trigger signal to CMS to record the LLP production event; outline computing systems, civil engineering and safety considerations; and present preliminary cost estimates and timelines for the project. We also conduct detailed simulation studies of the important cosmic ray and HL-LHC muon backgrounds, implementing full track/vertex reconstruction and background rejection, to ultimately demonstrate high signal efficiency and $\ll 1$ background event in realistic LLP searches for the main physics targets at MATHUSLA. This sensitivity is robust with respect to detector design or background simulation details. Appendices provide various supplemental information.

Aitken, Branden [Victoria U.]↗
DOE OSTI2025

Rapid Inference of Logic Gate Neural Networks for Anomaly Detection in High Energy Physics

The increasing data rates and complexity of detectors at the Large Hadron Collider (LHC) necessitate fast and efficient machine learning models, particularly for rapid selection of what data to store, known as triggering. Building on recent work in differentiable logic gates, we present a public implementation of a Convolutional Differentiable Logic Gate Neural Network (CLGN). We apply this to detecting anomalies at the Level-1 Trigger at CMS using public data from the CICADA project. We demonstrate that the CLGN achieves physics performance on par with or superior to conventional quantized neural networks. We also synthesize an LGN for a Field-Programmable Gate Array (FPGA) and show highly promising FPGA characteristics, notably zero Digital Signal Processor (DSP) resource usage. This work highlights the potential of logic gate networks for high-speed, on-detector inference in High Energy Physics and beyond.

FOS: Physical sciences↗
DOE OSTI2025

Sub-microsecond Transformers for Jet Tagging on FPGAs

We present the first sub-microsecond transformer implementation on an FPGA achieving competitive performance for state-of-the-art high-energy physics benchmarks. Transformers have shown exceptional performance on multiple tasks in modern machine learning applications, including jet tagging at the CERN Large Hadron Collider (LHC). However, their computational complexity prohibits use in real-time applications, such as the hardware trigger system of the collider experiments up until now. In this work, we demonstrate the first application of transformers for jet tagging on FPGAs, achieving $\mathcal{O}(100)$ nanosecond latency with superior performance compared to alternative baseline models. We leverage high-granularity quantization and distributed arithmetic optimization to fit the entire transformer model on a single FPGA, achieving the required throughput and latency. Furthermore, we add multi-head attention and linear attention support to hls4ml, making our work accessible to the broader fast machine learning community. This work advances the next-generation trigger systems for the High Luminosity LHC, enabling the use of transformers for real-time applications in high-energy physics and beyond.

Laatu, Lauri [Imperial Coll., London]↗
DOE OSTI2026

Patch Hierarchical Attention Transformer for Efficient Particle Jet Tagging

Real-time jet tagging is critical for identifying short-lived particle decays in the high-throughput detectors of the Large Hadron Collider, where real-time trigger systems responsible for deciding which collision events to store impose strict latency and accuracy constraints. While transformer architectures achieve the highest jet tagging accuracy when compute is unconstrained, their quadratic self-attention cost makes inference restrictive on trigger budget. Existing efficient variants reduce the computational cost, but hinder the classification performance. To address this limitation, we introduce the Patch Hierarchical Attention Transformer (PHAT-JeT), which combines two mechanisms: a physics-inspired geometric message-passing module that encodes local detector-plane structure, and a hierarchical patch-based attention scheme that computes exact attention within small particle groups while preserving global context through lightweight patch-token communication. Within a restricted budget, PHAT-JeT achieves state-of-the-art accuracy and background rejection among all resource-constrained jet tagging models on four benchmarks (\textsc{hls4ml}, JetClass, Top Tagging, and Quark--Gluon). Our code is available at https://github.com/aaronw5/PHAT-JeT.

Wang, Aaron [Illinois U., Chicago] (ORCID:00000003↗
DOE OSTI2026

Wasserstein Normalized Autoencoder for Anomaly Detection in ProtoDUNE Vertical-Drift Detector

ProtoDUNE Vertical Drift needs a selective triggering algorithm. The detector sits on Earth's surface, so cosmic activity dominates its data. Our goal in this paper is to trigger on neutrino events more robustly than the current deployed Analog-to-Digital Converter Simple Window (ADCSW) model and, eventually, search for signals of Beyond Standard Model (BSM) physics at DUNE as our ultimate North Star objective. As a step towards this goal, we evaluate a Wasserstein Normalized Autoencoder (WNAE) on simulated collection-plane only windows of shape $1\times10\times10$ where Neutrinos act as our BSM-proxy and Cosmic-ray Muons serve as our learned background. The network parameters are fitted using only cosmic-ray muon events as background in order to maintain an unsupervised pipeline. Training uses finite-step Langevin $x^-$ samples, positive-sample reconstruction energy, and an empirical sliced $2$-Wasserstein objective to learn a normalized Boltzmann energy model. We then calibrate on a nominal $5\,\mathrm{Hz}$ operating threshold calculated from cosmic validation data. Both WNAE and ADCSW accept 311 of 194,083 held-out cosmic background events at this $5\,\mathrm{Hz}$ threshold. We found that WNAE accepts 9,677 of 34,634 neutrino-proxy events $(27.9\pm0.24)\%$, compared with 10,076 $(29.1\pm0.24)\%$ for ADCSW, an observed WNAE-minus-ADCSW difference of $-1.15\%$. At another nominal $2\,\mathrm{Hz}$ target threshold, the corresponding efficiencies are $(20.5\pm0.22)\%$ and $(22.6\pm0.22)\%$, respectively. Of the WNAE-selected neutrino proxies at $5\,\mathrm{Hz}$, $(20.8\pm0.4)\%$ of the classified neutrino-proxy events are unique to WNAE, where the uncertainty is an absolute binomial standard error of $0.4\%$.

Zheng, Jake [Chicago U.] (ORCID:0009000218901379)↗
DOE OSTI2026

Real-Time Anomaly Detection for Searches Beyond the Standard Model in the ProtoDUNE Horizontal Drift Detector

This paper summarizes work conducted throughout a SULI internship at Fermi National Accelerator Laboratory focused on building an unsupervised machine learning model for real-time anomaly detection in ProtoDUNE Horizontal Drift. Using simulated data, we trained an autoencoder model on a pure cosmic dataset, and evaluated it on both cosmic and neutrino events—making the model an anomaly detector. The goal was to make a model which matches or exceeds the current ADC Simple Window trigger algorithm so that our model can perform at the same rate but provide sensitivity to potential beyond-the-Standard-Model (BSM) signatures. In the end, we were able to construct a model which slightly exceeds the capabilities of the ADC Simple Window while remaining completely unsupervised, achieving 31.9 ± 0.2% (26.6 ± 0.2%) ν efficiency at 5 Hz (2 Hz), a 3.6 (3.2) percentage point increase. Additionally, 17.5 ± 0.3% (18.3 ± 0.3%) of the events that passed the autoencoder at 5 Hz (2 Hz) were missed by the current trigger algorithm. Future work will investigate alternative normalization methods, including quantile transformation, and evaluate the model on ProtoDUNE-HD detector-glitch data if that data becomes available.

Wilson, C. [Cincinnati U., RWC]↗
DOE OSTI2025

EGS Collab Experiment 2: Continuous Active Source Seismic Monitoring (CASSM)

The dataset contains continuous active-source seismic monitoring (CASSM) data collected during EGS Collab Experiment 2, conducted from February to September 2022 at the Sanford Underground Research Facility in Lead, South Dakota. This experiment aimed to investigate enhanced geothermal systems through high-pressure fluid injections at depths of 1200-1500 meters. The seismic monitoring system included 16 three-component piezoelectric accelerometers and 24 hydrophones installed in boreholes around the injection zones, recording signals from piezoelectric seismic sources. Data were acquired using both continuous and triggered recording systems, with sampling rates of up to 100 kHz. The raw data are organized by timestamps and stored in .dat format, with accompanying log files. Calibration certificates for selected accelerometers are provided to aid in correcting sensor responses, though users are advised to consider possible effects of enclosures and installation on sensor performance. Users are strongly advised to consult the accompanying report, which outlines the experimental setup, data acquisition, sensor specifications, and recording systems.

15 GEOTHERMAL ENERGY↗
DOE OSTI2025

Atomistic Mechanisms of the Crystallographic Orientation‐Dependent Cu 1.8 S Conductive Channel Formation in Cu 2 S‐Based Memristors

Achieving multiple types of resistive switching in a single material with controlled ionic motion is a key challenge in neuromorphic computing, traditionally addressed by combining materials with distinct switching behaviors. Here, Cu 2-x S is identified as a promising candidate to overcome this limitation due to its hierarchical phase transitions. Using in situ biasing experiments, reversible and non-reversible phase transitions (and resistive switching) are demonstrated in γ-Cu 2 S by controlling the compliance current. The formation of parallel high-digenite Cu 1.8 S channels, orientated along the γ-Cu 2 S [201] crystallographic direction, drives the nonvolatile resistive switching. These channels emerge via an intermediate δ-Cu 2 S phase and are stabilized at room temperature by residual strains, alongside β-Cu 2 S phase. In conclusion, the work clarifies the complex, electrically triggered phase transformations in γ-Cu 2 S, and highlights the potential of Cu 2-x S as a versatile material for neuromorphic computing.

75 CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND↗
DOE OSTI2026

Performance of the LHCb muon detector in Run 3

In Run 3 of the LHC, the instantaneous luminosity at the LHCb interaction point has been increased by a factor of five, from to $\mathscr{L}$ = 4 x 10 32 cm -2 s -2 to $\mathscr{L}$ = 2 x 10 33 cm -2 s -1 . Several hardware interventions, including a complete overhaul of the readout electronics, have been carried out on the muon detector. The muon identification algorithms in the software trigger were improved with the aim of ensuring Run 2 performance under a higher particle rate. The operation and calibration of the upgraded muon detector are presented. The muon detection efficiency and muon identification performance are evaluated on data calibration samples collected during the year 2024. A muon identification efficiency above 90% with sub-percent hadron misidentification probability is achieved by exploiting the pattern of hits in the muon detector.

Gaseous detectors↗
DOE OSTI2024

Enriching the physics program of the CMS experiment via data scouting and data parking

Specialized data-taking and data-processing techniques were introduced by the CMS experiment in Run 1 of the CERN LHC to enhance the sensitivity of searches for new physics and the precision of standard model measurements. These techniques, termed data scouting and data parking, extend the data-taking capabilities of CMS beyond the original design specifications. The novel data-scouting strategy trades complete event information for higher event rates, while keeping the data bandwidth within limits. Data parking involves storing a large amount of raw detector data collected by algorithms with low trigger thresholds to be processed when sufficient computational power is available to handle such data. The research program of the CMS Collaboration is greatly expanded with these techniques. The implementation, performance, and physics results obtained with data scouting and data parking in CMS over the last decade are discussed in this Report, along with new developments aimed at further improving low-mass physics sensitivity over the next years of data taking.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗
DOE OSTI2025

Ion Transport in Carbon Nanotube Porins with a pH-Switchable Entrance Gate

Molecular transport in nanofluidic channels often differs drastically from conventional bulk transport. Strong confinement in those channels amplifies the roles of surface transport, surface defects, and molecular gates. Here, in this study, we introduce a chemical functionality at the nanotube rim that acts as a pH-triggered molecular gate by forming a movable lid that blocks the pore entrance. We use ion and proton transport measurements to show that these sub-1 nm diameter fluorescent ultrashort carbon nanotube porins (FUNPs) modulate ion transport by switching between the “open” and “closed” conformations of this gate. Specifically, at neutral pH the channel lid is open, allowing unimpeded ion transport through the gate, whereas at acidic pH values the lid forms a “closed” conformation that blocks transport through the nanotube. We also report first-principles MD simulations that confirm this gating mechanism and reveal molecular details of the ion and proton transport processes in these functional nanopores.

Carbon nanotubes↗