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At least 217 records · Page 12

CRL4A DTL degrades DNA-PKcs to modulate NHEJ repair and induce genomic instability and subsequent malignant transformation

Genomic instability induced by DNA damage and improper DNA damage repair is one of the main causes of malignant transformation and tumorigenesis. DNA double strand breaks (DSBs) are the most detrimental form of DNA damage, and nonhomologous end-joining (NHEJ) mechanisms play dominant and priority roles in initiating DSB repair. A well-studied oncogene, the ubiquitin ligase Cullin 4A (CUL4A), is reported to be recruited to DSB sites in genomic DNA, but whether it regulates NHEJ mechanisms of DSB repair is unclear. Here, we discovered that the CUL4A-DTL ligase complex targeted the DNA-PKcs protein in the NHEJ repair pathway for nuclear degradation. Overexpression of either CUL4A or DTL reduced NHEJ repair efficiency and subsequently increased the accumulation of DSBs. Moreover, we demonstrated that overexpression of either CUL4A or DTL in normal cells led to genomic instability and malignant proliferation. Consistent with the in vitro findings, in human precancerous lesions, CUL4A expression gradually increased with increasing malignant tendency and was negatively correlated with DNA-PKcs and positively correlated with γ-H2AX expression. Collectively, this study provided strong evidence that the CUL4A-DTL axis increases genomic instability and enhances the subsequent malignant transformation of normal cells by inhibiting NHEJ repair. These results also suggested that CUL4A may be a prognostic marker of precancerous lesions and a potential therapeutic target in cancer.

59 BASIC BIOLOGICAL SCIENCES↗

Hydrodynamic instability at impact interfaces and planetary implications

Abstract Impact-induced mixing between bolide and target is fundamental to the geochemical evolution of a growing planet, yet aside from local mixing due to jetting – associated with large angles of incidence between impacting surfaces – mixing during planetary impacts is poorly understood. Here we describe a dynamic instability of the surface between impacting materials, showing that a region of mixing grows between two media having even minimal initial topography. This additional cause of impact-induced mixing is related to Richtmyer-Meshkov instability (RMI), and results from pressure perturbations amplified by shock-wave refraction through the corrugated interface between impactor and target. However, unlike RMI, this new impact-induced instability appears even if the bodies are made of the same material. Hydrocode simulations illustrate the growth of this mixing zone for planetary impacts, and predict results suitable for experimental validation in the laboratory. This form of impact mixing may be relevant to the formation of stony-iron and other meteorites.

58 GEOSCIENCES↗

Pomeranchuk instability from electronic correlations in CsTi 3 Bi 5 kagome metal

Electronic nematicity, the spontaneous breaking of rotational symmetry, has emerged as a key instability in correlated quantum systems. CsTi 3 Bi 5 , a kagome metal of the AV 3 Sb 5 (A = K, Rb, Cs) family, hosts rich unconventional electronic phases, yet the origin of its nematicity remains unsettled. Here, we combine polarization-dependent angle-resolved photoemission spectroscopy with functional renormalization group calculations on a fully interacting ab initio model. We reveal an orbital-selective nematic deformation in the low-energy band structure and identify a finite angular momentum (d-wave) Pomeranchuk instability driven by electronic correlations in specific orbital channels and detuning from Van Hove singularities. Our results establish a direct link between orbital selectivity and symmetry-breaking instabilities in CsTi 3 Bi 5 , providing a microscopic framework for nematic order in kagome systems.

Bigi, Chiara [Synchrotron SOLEIL, Saint-Aubin (Fra↗

Laser-plasma instabilities in long scale-length plasmas relevant to shock-ignition

We present 2D particle-in-cell simulations of laser-plasma instabilities (LPI) performed using conditions relevant to experiments on the OMEGA and NIF laser facilities. The laser intensity used is 2×10 15 W cm -2 , which allows comparison with previous experiments and simulations investigating shock ignition, though this is a relatively low intensity for the scheme. We find that the large convective gain of the instabilities leads to dynamics that are largely controlled by pump depletion and to scattering or absorption by LPIs predominantly occurring away from the quarter-critical density. The two-plasmon decay (TPD) instability is dominant for OMEGA-type conditions and remains important at the NIF-scale. In both cases, most absorption from TPD occurs near its Landau cutoff density, and we examine its nonlinear dynamics in this region, focusing on the ion-acoustic waves responsible for saturation. For NIF-type conditions, stimulated Raman scattering (SRS) and stimulated Brillouin scattering divert significant fractions of laser energy, and we find that SRS backscatter can occur with high gain at low densities due to kinetic effects. An in-depth analysis of hot-electron production is performed to identify the main sources and their characteristic electron temperature. For both simulations presented, the overall hot-electron temperature lies between 30 and 35 keV. This is relatively low and will likely increase shock pressure; however, the distributions also contain a significant number of high-energy (E k >100 keV) electrons that would likely cause unacceptable preheat. We, therefore, suggest some strategies that may be utilized to minimize this high-energy component. I. INTROD

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗

Alfvénic modes excited by the kink instability in PHASMA

Magnetic flux ropes have been successfully created with plasma guns in the newly commissioned PHAse Space MApping (PHASMA) experiment. The flux ropes exhibit the expected m = 1 kink instability. The observed threshold current for the onset of this kink instability is half of the Kruskal–Shafranov current limit, consistent with predictions for the non-line tied boundary condition of PHASMA. The helicity, paramagnetism, and growth rate of the observed magnetic fluctuations are also consistent with kink instability predictions. The observed fluctuation frequency appears to be a superposition of a real frequency due to a Doppler shift of the kink mode arising from plasma flow (~2kHz) and a contribution from a wave mode (~5 kHz). The dispersion of the wave mode is consistent with an Alfvén wave. Distinct from most previ-ous laboratory studies of flux ropes, the working gas in PHASMA is argon. Thus, the ion cyclotron frequency in PHASMA is quite low and the frequency of the Alfvénic mode plateaus at ~0.5 of the ion gyro frequency with increasing background magnetic field strength.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗

Studying the Richtmyer–Meshkov instability in convergent geometry under high energy density conditions using the Decel platform

The “Decel” platform at Sandia National Laboratories investigates the Richtmyer–Meshkov instability (RMI) in converging geometry under high energy density conditions [Knapp et al., Phys. Plasmas 27, 092707 (2020)]. In Decel, the Z machine magnetically implodes a cylindrical beryllium liner filled with liquid deuterium, launching a converging shock toward an on-axis beryllium rod machined with sinusoidal perturbations. The passage of the shock deposits vorticity along the Be/D2 interface, causing the perturbations to grow. Here, we present platform improvements along with recent experimental results. To improve the stability of the imploding liner to the magneto Rayleigh–Taylor instability, we modified its acceleration history by shortening the Z electrical current pulse. Next, we introduce a “split rod” configuration that allows two axial modes to be fielded simultaneously in different axial locations along the rod, doubling our data per experiment. We then demonstrate that asymmetric slots in the return current structure modify the magnetic drive pressure on the surface of the liner, advancing the evolution on one side of the rod by multiple ns compared to its 180° counterpart. This effectively enables two snapshots of the instability at different stages of evolution per radiograph with small deviations of the cross-sectional profile of the rod from the circular. Using this platform, we acquired RMI data at 272 and 157 μm wavelengths during the single shock stage. Finally, we demonstrate the utility of these data for benchmarking simulations by comparing calculations using ALEGRA MHD and RageRunner.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗

Electron Weibel instability induced magnetic fields in optical-field ionized plasmas

Generation and amplification of magnetic fields in plasmas is a long-standing topic that is of great interest to both plasma and space physics. The electron Weibel instability is a well-known mechanism responsible for self-generating magnetic fields in plasmas with temperature anisotropy and has been extensively investigated in both theory and simulations, yet experimental verification of this instability has been challenging. Recently, we demonstrated a new experimental platform that enables controlled initialization of highly nonthermal and/or anisotropic plasma electron velocity distributions via optical-field ionization. Using an external electron probe bunch from a linear accelerator, the onset, saturation, and decay of the self-generated magnetic fields due to electron Weibel instability were measured for the first time to our knowledge. In this paper, we will first present experimental results on time-resolved measurements of the Weibel magnetic fields in non-relativistic plasmas produced by Ti:Sapphire laser pulses (0.8 μm) and then discuss the feasibility of extending the study to a quasi-relativistic regime by using intense CO 2 (e.g., 9.2 μm) lasers to produce much hotter plasmas.

36 MATERIALS SCIENCE↗

Transition from ITG to MTM linear instabilities near pedestals of high density plasmas

Here, investigation of linear gyrokinetic ion-scale modes ( k θ ρ s = 0.3) finds that a transition from ion temperature gradient to microtearing mode (MTM) dominance occurs as the density is increased near the pedestal region of a parameterized DIII-D sized tokamak. H-modes profile densities, temperatures, and equilibria are parameterized utilizing the OMFIT PRO_create module. With these profiles, linear gyrokinetic ion-scale instabilities are predicted with CGYRO. This transition (nMTM) has a weak dependence on radial location in the region near the top of the pedestal ( ρ = 0.7 – 0.9), which allows simulating single radii to examine the approximate scaling of nMTM with global parameters. The critical nMTM is found to scale with plasma current. Additionally, increasing the minor radius by decreasing the aspect ratio and increasing the major radius are found to reduce nMTM. However, any relationship between nMTM and density limit physics remains unclear as nMTM increases relative to the Greenwald density with larger minor radius and with larger magnetic field, suggesting that the transport due to MTM may be less important for a reactor. Additionally, nMTM is sensitive to the pedestal temperature, the local electron and ion gradients, the ratio of ion to electron temperature T i / T e, and the current profile. MTMs are predicted to be the dominant instability in the core at similar Greenwald fractions for DIII-D, NSTX, and NSTX-U H-mode experiments, supporting the results of the parameterized study. Additionally, MTMs continue to be the dominant linear instability in a DIII-D L-mode after an H–L transition as the plasma approaches a density limit disruption despite the large change in plasma profiles.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗

Electrostatic upper-hybrid mode instability driven by a ring electron distribution

Quasi electrostatic fluctuations in the upper-hybrid frequency range are commonly detected in the planetary magnetospheric environment. The origin of such phenomena may relate to the instability driven by a loss-cone feature associated with the electrons populating the dipole-like magnetic field. The present paper carries out a one-dimensional electrostatic particle-in-cell simulation accompanied by a reduced quasilinear kinetic theoretical analysis to investigate the dynamics of the upper-hybrid mode instability driven by an initial ring electron distribution function, which is a form of loss-cone distribution. A favorable comparison is found between the two approaches, which shows that the reduced quasilinear theory, which is grounded in the concept of a model of the particle distribution function that is assumed to maintain a fixed mathematical form except that the macroscopic parameters that define the distribution are allowed to evolve in time, can be an effective tool in the study of plasma instabilities, especially if it is guided by and validated against the more rigorous simulation result.

Physics↗

Three-dimensional shear-flow instability saturation via stable modes

Turbulence in three dimensions (3D) supports vortex stretching that has long been known to accomplish energy transfer to small scales. Moreover, net energy transfer from large-scale, forced, unstable flow-gradients to smaller scales is achieved by gradient-flattening instability. Despite such enforcement of energy transfer to small scales, it is shown here that the shear-flow-instability-supplied 3D-fluctuation energy is largely inverse-transferred from the fluctuation to the mean-flow gradient, and such inverse transfer is more efficient for turbulent fluctuations in 3D than in two dimensions (2D). The transfer is due to linearly stable eigenmodes that are excited nonlinearly. The stable modes, thus, reduce both the nonlinear energy cascade to small scales and the viscous dissipation rate. The vortex-tube stretching is also suppressed. Up-gradient momentum transport by the stable modes counters the instability-driven down-gradient transport, which also is more effective in 3D than in 2D (≈70% vs ≈50%). From unstable modes, these stable modes nonlinearly receive energy via zero-frequency fluctuations that vary only in the direction orthogonal to the plane of 2D shear flow. The more widely occurring 3D turbulence is thus inherently different from the commonly studied 2D turbulence, despite both saturating via stable modes.

Mechanics↗

Analysis of fusion fuel conditions and instability development in shocklessly compressed MagLIF implosion simulations

Magnetized liner inertial fusion (MagLIF) implosions on the Z accelerator have almost exclusively been driven by ∼100-ns rise time current pulses. The rise time is selected to be as short as achievable on Z partially to minimize the time during which deleterious implosion instabilities can develop. Modifying the shape of the current pulse could provide benefits for MagLIF, including more efficient compression of the fusion fuel and the magnetic flux inside the liner cavity. Quasi-isentropic compression of the liner prevents formation of shocks in the liner material and reduces the amount of entropy generation within the liner. This allows for more final compression of the liner and fuel assembly. We present results from one-dimensional (1D) radiation-magnetohydrodynamic (rad-MHD) simulations comparing thermonuclear fuel conditions in MagLIF implosions driven with two different current pulses: a ∼100-ns rise time, ∼21.5 MA peak current “short pulse” and a ∼200-ns rise time, ∼21.5 MA peak current “shockless” pulse. We also quantify and compare the instability development in three-dimensional (3D) MHD implosion simulations driven by these two different pulse shapes. Our 1D simulations indicate that the shocklessly compressed MagLIF implosion performs better than the short pulse driven implosion with a >50% higher thermonuclear neutron yield, and 3D simulations indicate comparable implosion instability development, suggesting that pulse shaping could enable improvements to MagLIF performance on Z without compromising implosion stability.

Shipley, G. A. (ORCID:0000000205364001)↗

Investigating instabilities in magnetized low-pressure capacitively coupled RF plasma using particle-in-cell (PIC) simulations

The effect of a uniform magnetic field on particle transport in low-pressure radio frequency (RF) capacitively coupled plasma (CCP) has been studied using a particle-in-cell model. Three distinct regimes of plasma behavior can be identified as a function of the magnetic field. In the first regime at low magnetic fields, asymmetric plasma profiles are observed within the CCP chamber due to the effect of $\overrightarrow{E}$ × $\overrightarrow{B}$ drift. As the magnetic field increases, instabilities develop and form self-organized spoke-shaped structures that are distinctly seen within the bulk plasma closer to the sheath. In this second regime, the spoke-shaped coherent structures rotate inside the plasma chamber in the -$\overrightarrow{E}$ × $\overrightarrow{B}$ direction, where $\overrightarrow{E}$ × $\overrightarrow{B}$ are the DC electric and magnetic field vectors, respectively, and the DC electric field exists in the sheath and pre-sheath regions. The spoke rotation frequency is in the megahertz range. As the magnetic field strength increases further, the rotating coherent spokes continue to exist near the sheath. The coherent structures are, however, accompanied by new small-scale incoherent structures originating and moving within the bulk plasma region away from the sheath. This is the third regime of plasma behavior. The threshold values of the magnetic field between these regimes were found not to vary with changing plasma reactor geometry (e.g., area ratio between ground and powered electrodes) or the use of an external capacitor between the RF-powered electrode and the RF source. The threshold values of the magnetic field between these regimes shift toward higher values with increasing gas pressure. Analysis of the results indicates that the rotating structures are due to the lower hybrid instability driven by density gradients and electron-neutral collisions. This paper provides guidance on the upper limit of the magnetic field for instability-free operation in low-pressure CCP-based semiconductor deposition and etch systems that use the external magnetic field for plasma uniformity control.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗

Self-consistent simulation of resistive kink instabilities with runaway electrons

A new fluid model for runaway electron simulation based on fluid description is introduced and implemented in the magnetohydrodynamics code M3D-C1, which includes self-consistent interactions between plasma and runaway electrons. The model utilizes the method of characteristics to solve the continuity equation for the runaway electron density with large convection speed, and uses a modified Boris algorithm for pseudo particle pushing. The model was employed to simulate magnetohydrodynamics instabilities happening in a runaway electron final loss event in the DIII-D tokamak. Nonlinear simulation reveals that a large fraction of runaway electrons get lost to the wall when kink instabilities are excited and form stochastic field lines in the outer region of the plasma. Plasma current converts from runaway electron current to Ohmic current, and get pinched at the magnetic axis. Here, given the good agreement with experiment, the simulation model provides a reliable tool to study macroscopic plasma instabilities in existence of runaway electron current, and can be used to support future studies of runaway electron mitigation strategies in ITER.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗

Plasma dynamics, instabilities and OH generation in a pulsed atmospheric pressure plasma with liquid cathode: a diagnostic study

Abstract While plasma–liquid interactions have been an important focus in the plasma research community, the impact of the strong coupling between plasma and liquid on plasma properties and processes remains not fully understood. In this work, we report on the impact of the applied voltage, pulse width and liquid conductivity on the plasma morphology and the OH generation for a positive pulsed DC atmospheric pressure plasma jet with He–0.1% H 2 O mixture interacting with a liquid cathode. We adopted diagnostic techniques of fast imaging, 2D laser induced fluorescence of OH and Thomson scattering spectroscopy. We show that plasma instabilities and enhanced evaporation occur and have a significant impact on the OH generation. At elevated plasma energies, it is found that the plasma contracts due to a thermal instability through Ohmic heating and the contraction coincides with a depletion in the OH density in the core due to electron impact dissociation. For lower plasma energies, the instability is suppressed/delayed by the equivalent series resistor of the liquid electrode. An estimation of the energy flux from the plasma to the liquid shows that the energy flux of the ions released into the liquid by positive ion hydration is dominant, and significantly larger than the energy needed to evaporate sufficient amount of water to account for the measured H 2 O concentration increase near the plasma–liquid interface.

Physics↗

Dynamical instability of collapsed dark matter halos

A self-interacting dark matter halo can experience gravothermal collapse, resulting in a central core with an ultrahigh density. It can further contract and collapse into a black hole, a mechanism proposed to explain the origin of supermassive black holes. We study dynamical instability of the core in general relativity. Here we use a truncated Maxwell-Boltzmann distribution to model the dark matter distribution and solve the Tolman-Oppenheimer-Volkoff equation. For given model parameters, we obtain a series of equilibrium configurations and examine their dynamical instability based on considerations of total energy, binding energy, fractional binding energy, and adiabatic index. Our numerical results indicate that the core can collapse into a black hole when the fractional binding energy reaches 0.035 with a central gravitational redshift of 0.5. We further show for the instability to occur in the classical regime, the boundary temperature of the core should be at least 10% of the mass of dark matter particles; for a 10 9 M ⊙ seed black hole, the particle mass needs to be larger than a few keV. These results can be used to constrain different collapse models, in particular, those with dissipative dark matter interactions.

79 ASTRONOMY AND ASTROPHYSICS↗

MARS-Q modeling of kink-peeling instabilities in DIII-D QH-mode plasma

In quiescent H-mode (QH-mode) regime, edge harmonic oscillations (EHOs) are believed to provide necessary radial transport to prevent occurrence of large edge localized modes. A systematic modeling study is performed here on the low- n EHOs in a DIII-D QH-mode plasma (Chen et al 2016 Nucl. Fusion 56 076011), by utilizing the MARS-Q code (Liu et al 2013 Phys. Plasmas 20 042503). Both the n = 1 and n = 2 instabilities are found to be strongly localized near the plasma edge, exhibiting the edge-peeling characteristics. The DIII-D resistive wall is found to have minor effects on these instabilities. The plasma resistivity is found to strongly modify the mode growth rate. Assuming the Spitzer model for the plasma resistivity, the computed mode growth rate scales as S sup>-1/3 with S being the Lundquist number. Toroidal flow of the plasma slightly stabilizes these edge localized kink-peeling modes. Drift kinetic effects all have a destabilization effect on these modes. Non-perturbative magneto-hydrodynamic-kinetic hybrid computations find that the drift kinetic effects associated with thermal particle species push the peak location of the eigenmode radially inward but still in the pedestal region. The modeled plasma temperature and density fluctuations in the plasma edge region, as well as the poloidal magnetic field perturbations along both the low and high field sides of the plasma surface, are in good agreement with experimental measurements. Finally, the quasi-linear initial value simulations find a strong non-linear interplay between the kink-peeling instability and the toroidal flow near the plasma edge. The combined effect of the damping of the flow amplitude and change of the edge flow shear is found to be the stabilizing factor for the kink-peeling mode, leading to the mode saturation and thus EHOs.

Physics↗

Quantum three-wave instability

For the three-wave interaction, the lowest-order nonlinear interaction in plasma dynamics, we describe how the quantum system, which is time-independent, nonchaotic, finite-dimensional, and Hermitian, can give rise to a linear instability corresponding to that in the classical system. Furthermore, we show that the instability is realized in the quantum regime as a cascade of the wave function in the space of occupation number states, and the unstable quantum system has a richer spectrum and a much longer recurrence time than the stable quantum system. The conditions for instability of the quantum three-wave interaction are described.

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗

Single monkey-saddle singularity of a Fermi surface and its instabilities

Fermi surfaces can undergo sharp transitions under smooth changes of parameters. Such transitions can have a topological character, as is the case when a higher-order singularity, one that requires cubic or higher-order terms to describe the electronic dispersion near the singularity, develops at the transition. When time-reversal and inversion symmetries are present, odd singularities can only appear in pairs within the Brillouin zone. In this case, the combination of the enhanced density of states that accompanies these singularities and the nesting between the pairs of singularities leads to interaction-driven instabilities. Here, we present examples of single n = 3 (monkey-saddle) singularities when time-reversal and inversion symmetries are broken. We then turn to the question of what instabilities are possible when the singularities are isolated. For spinful electrons, we find that the inclusion of repulsive interactions destroys any isolated monkey-saddle singularity present in the noninteracting spectrum by developing Stoner or Lifshitz instabilities. In contrast, for spinless electrons and at the mean-field level, we show that an isolated monkey-saddle singularity can be stabilized in the presence of short-range repulsive interactions.

75 CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND↗