Inhibitory effects of some hydrocolloids on the formation of heterocyclic amines in roast beef
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Splitting method is a powerful method to handle application problems by splitting physics, scales, domain, and so on. Many splitting algorithms have been designed for efficient temporal discretization. Here, in this paper, our goal is to use temporal splitting concepts in designing machine learning algorithms and, at the same time, help splitting algorithms by incorporating data and speeding them up. We propose a machine learning assisted splitting scheme which improves the efficiency of the scheme meanwhile preserves the accuracy. We consider a recently introduced multiscale splitting algorithms, where the multiscale problem is solved on a coarse grid. To approximate the dynamics, only a few degrees of freedom are solved implicitly, while others explicitly. This splitting concept allows identifying degrees of freedom that need implicit treatment. In this paper, we use this splitting concept in machine learning and propose several strategies. First, the implicit part of the solution can be learned as it is more difficult to solve, while the explicit part can be computed. This provides a speed-up and data incorporation for splitting approaches. Secondly, one can design a hybrid neural network architecture because handling explicit parts requires much fewer communications among neurons and can be done efficiently. Thirdly, one can solve the coarse grid component via PDEs or other approximation methods and construct simpler neural networks for the explicit part of the solutions. We discuss these options and implement one of them by interpreting it as a machine translation task. This interpretation of the splitting scheme successfully enables us using the Transformer since it can perform model reduction for multiple time series and learn the connection between them. We also find that the splitting scheme is a great platform to predict the coarse solution with insufficient information of the target model: the target problem is partially given and we need to solve it through a known problem which approximates the target. Our machine learning model can incorporate and encode the given information from two different problems and then solve the target problems. We conduct four numerical examples and the results show that our method is stable and accurate.
Physics-informed neural network (PINN) is a data-driven approach to solving equations. It is successful in many applications; however, the accuracy of the PINN is not satisfactory when it is used to solve multiscale equations. Homogenization approximates a multiscale equation by a homogenized equation without multiscale property; it includes solving cell problems and the homogenized equation. The cell problems are periodic, and we propose an oversampling strategy that significantly improves the PINN accuracy on periodic problems. The homogenized equation has a constant or slow dependency coefficient and can also be solved by PINN accurately. We hence proposed a 3-step method, neural homogenization based PINN (NH-PINN), to improve the PINN accuracy for solving multiscale problems with the help of homogenization.
A typical U.S. homebuyer's understanding of whether a property faces flood risk is based on whether the property is located inside the National Flood Insurance Program's (NFIP) Special Flood Hazard Area (SFHA). The SFHA boundary, however, may bias homebuyers’ perceptions of flood risk relative to unobserved true risk because the SFHA is an incomplete, and sometimes inaccurate, representation of flood hazards. Using a national dataset of property transactions, flood hazard data from the First Street Foundation, state-level measures of flood disclosure laws, and a spatially restricted triple-difference design, we distinguish capitalization effects of policy-driven (SFHA) versus quasi-objective (First Street) indicators of flood hazard. We identify these effects by assessing thousands of local spatial interactions between property SFHA designations, measures of quasi-objective flood hazard, and being in a state that mandates flood history disclosures. Being inside the SFHA generates a risk discount, but the signal is muted relative to underlying hazard exposure. Further, the SFHA signal can result in inefficient discounts for properties erroneously mapped in the SFHA. Disclosure requirements about flood history accentuate price effects for hazardous properties and result in more adequate risk internalization. In the absence of disclosures, however, we find either no or a weak risk signal for houses outside the SFHA that face flood hazard. Our results highlight potential benefits of updating SFHA boundaries to include all houses that may experience flooding, and argue in favor of requiring flood-related disclosures from sellers to improve the market's ability to internalize flood risk.
Bacterial microcompartments (BMCs) are protein-encapsulated compartments found across at least 23 bacterial phyla. BMCs contain a variety of metabolic processes that share the commonality of toxic or volatile intermediates, oxygen-sensitive enzymes and cofactors, or increased substrate concentration for magnified reaction rates. These compartmentalized reactions have been computationally modeled to explore the encapsulated dynamics, ask evolutionary-based questions, and develop a more systematic understanding required for the engineering of novel BMCs. Many crucial aspects of these systems remain unknown or unmeasured, such as substrate permeabilities across the protein shell, feasibility of pH gradients, and transport rates of associated substrates into the cell. This review explores existing BMC models, dominated in the literature by cyanobacterial carboxysomes, and highlights potentially important areas for exploration.
The optimal choice of d-block metals in single atom catalysts (SACs) is crucial for designing efficient electrocatalysts for activating the Oxygen reduction reaction (ORR)/ Oxygen evolution reaction (OER) in lithiumoxygen batteries (LOBs). Herein, we used the Quantum Mechanics methods to understand the origin of reactivity for a series of 16 d-block metals supported on nitrogen-doped graphene as SACs for ORR and OER in LOBs. Based on the Gibbs free energy calculations, we found that among the 16 SACs investigated, Zn-SAC exhibits the highest electrochemical activity with the lowest overpotential of 0.17 V. Here we then used machine learning (ML) to develop an intrinsic descriptor, phi, that correlates the catalytic activity with electronic and chemical properties of the catalytic centers at the M-N 4 active site on graphene surface. We established a linear relationship between phi and the catalytic activity that provides guidance for designing efficient SACs for electrocatalysis in LOBs. To validate these predictions, we report electrochemical measurements showing that Zn-SAC exhibits an ultra-stable cyclability with reduced overpotentials over Mo-SAC and nitrogen-doped graphene (NG), confirming our theoretical prediction. This fundamental work provides a deep understanding on the rational design of efficient SACs for OER/ ORR in LOBs.
The sequence of the promoter used to drive expression of glcDEF operon in the engineered strain MFL185 in the original article was incorrect. As described here, we performed additional experiments that indicate expression of this operon was increased in MFL185, as intended. Ultimately, this error is immaterial with respect to the findings and conclusions reported in the original article.
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A new method to construct a horizontal resolution-dependent wind speed adjustment factor for evaluating tropical cyclones (TCs) in global climate models (GCMs) is presented here. In contrast to the previous studies that used idealized axisymmetric wind fields, this study analyzes 48 hours of 10-second surface wind fields from 1-km TC simulations. The adjustment factor is derived from filtering the simulated TC wind fields onto various horizontal grid spacings typical of those used in GCMs. The new adjustment factor leads to TCs with greater intensity than the existing adjustment factors for horizontal grid spacings smaller than 30 km. This difference is attributed to more realistic wind fields in the TC simulations that contain highly asymmetric, localized patches of higher wind speeds instead of axisymmetric wind fields. Applying the new adjustment factor to select GCM simulations suggests the common interpretation of low-intensity bias in GCM-simulated TCs might be slightly exaggerated.
In situ electron density profiles obtained from Arase in the night magnetic local time (MLT) sector and from RBSP-B covering all MLTs are used to study the small-scale density irregularities present in the plasmasphere and near the plasmapause. Electron density perturbations with amplitudes >10% from background density and with time-scales less than 30-min are investigated here as the small-scale density irregularities. The statistical survey of the density irregularities is carried out using nearly 2 years of density data obtained from RBSP-B and 4 months of data from Arase satellites. The results show that density irregularities are present globally at all MLT sectors and L-shells both inside and outside the plasmapause, with a higher occurrence at L > 4. The occurrence of density irregularities is found to be higher during disturbed geomagnetic and interplanetary conditions. The case studies presented here revealed: (1) The plasmaspheric density irregularities observed during both quiet and disturbed conditions are found to coexist with the hot plasma sheet population. (2) During quiet periods, the plasma waves in the whistler-mode frequency range are found to be modulated by the small-scale density irregularities, with density depletions coinciding well with the decrease in whistler intensity. Our observations suggest that different source mechanisms are responsible for the generation of density structures at different MLTs and geomagnetic conditions.
The Radiative-Convective Equilibrium Model Intercomparison Project (RCEMIP) is an intercomparison of multiple types of numerical models configured in radiative-convective equilibrium (RCE). RCE is an idealization of the tropical atmosphere that has long been used to study basic questions in climate science. Here, we employ RCE to investigate the role that clouds and convective activity play in determining cloud feedbacks, climate sensitivity, the state of convective aggregation, and the equilibrium climate. RCEMIP is unique among intercomparisons in its inclusion of a wide range of model types, including atmospheric general circulation models (GCMs), single column models (SCMs), cloud-resolving models (CRMs), large eddy simulations (LES), and global cloud-resolving models (GCRMs). The first results are presented from the RCEMIP ensemble of more than 30 models. While there are large differences across the RCEMIP ensemble in the representation of mean profiles of temperature, humidity, and cloudiness, in a majority of models anvil clouds rise, warm, and decrease in area coverage in response to an increase in sea surface temperature (SST). Nearly all models exhibit self-aggregation in large domains and agree that self-aggregation acts to dry and warm the troposphere, reduce high cloudiness, and increase cooling to space. The degree of self-aggregation exhibits no clear tendency with warming. There is a wide range of climate sensitivities, but models with parameterized convection tend to have lower climate sensitivities than models with explicit convection. In models with parameterized convection, aggregated simulations have lower climate sensitivities than unaggregated simulations.
Abstract The frequency with which tropical cyclones (TCs) occur controls all other aspects of tropical cyclone risk since a storm that does not occur can do no harm. Yet this frequency is poorly understood. There is no accepted theory that explains the average number of TCs that occur each year on the Earth, nor how that number will change with global warming. Arguments based on global budgets of heat or moisture do not yet appear helpful, nor does a detailed understanding of the physical processes of TC genesis. Empirical indices that predict TC frequency as a function of large‐scale environmental variables can explain some of its relative variations in space and time, but not its absolute value. Global numerical models with horizontal grid spacings on the order of 25–50 km have allowed much improved simulations of TC activity, however. Many such models project a decrease in frequency with warming, but some project an increase. Idealized simulations, including those at higher resolutions, offer promise by allowing a systematic, deductive investigation of the roles of individual environmental factors. In addition to the larger‐scale environmental modulation of genesis likelihood, precursor disturbances, or “seeds”, may exert an independent influence on TC frequency.
We present a case study of the field-aligned current (FAC) systems that transpire within the high-altitude auroral acceleration region of an “auroral bead” initiated double oval substorm observed on 23 February 2001 by the Cluster fleet. Conjunctive Cluster measurements and auroral images from IMAGE reveal that auroral bead current system formation and evolution is a multi-scale, injection-mediated process. The FACs at large scales vary on substorm evolution time scales (~minutes) in response to the injection and evolution of hotter denser magnetospheric plasma. Embedded within the large-scale FACs are intense short-scale (≲ few 10s of km) currents comprising dispersive scale Alfvén wave (DAW) fluctuations. The DAWs are a complex mixture of ingoing and reflected components that regularly interfere to form a broad spectrum of kinetic (dispersive) scale Alfvénic field-line resonances (KFLRs). The Alfvénic currents appear as a nested series of upward and downward FAC densities with amplitudes reaching a few 100 nA/m 2 . Energized field-aligned or counterstreaming electrons near keV energies and below are observed with parallel skews that vary in concert with variations in the DAW current sense. Positive correlations between DAW electric field energy densities and the energies of energized H + , He + , and O + outflow are observed, indicative of ion energization within the DAW fields. Due to their L-shell location (L~5.8–7.0) and associations with injections, the KFLRs are interpreted as the high-altitude auroral zone analog of KFLRs observed in the equatorial inner magnetosphere.
Abstract Characteristics of, and fundamental differences between, the radiative‐convective equilibrium (RCE) climate states following the Radiative‐Convective Equilibrium Model Intercomparison Project (RCEMIP) protocols in the Community Atmosphere Model version 5 (CAM5) and version 6 (CAM6) are presented. This paper explores the characteristics of clouds, moisture, precipitation and circulation in the RCE state, as well as the tropical response to surface warming, in CAM5 and CAM6 with different parameterizations. Overall, CAM5 simulates higher precipitation rates that result in larger global average precipitation, despite lower outgoing longwave radiation compared to CAM6. Differences in the structure of clouds, particularly the amount and vertical location of cloud liquid, exist between the CAM versions and can, in part, be related to distinct representations of shallow convection and boundary layer processes. Both CAM5 and CAM6 simulate similar peaks in cloud fraction, relative humidity, and cloud ice, linked to the usage of a similar deep convection parameterization. These anvil clouds rise and decrease in extent in response to surface warming. More generally, extreme precipitation, aggregation of convection, and climate sensitivity increase with warming in both CAM5 and CAM6. This analysis provides a benchmark for future studies that explore clouds, convection, and climate in CAM with the RCEMIP protocols now available in the Community Earth System Model. These results are discussed within the context of realistic climate simulations using CAM5 and CAM6, highlighting the usefulness of a hierarchical modeling approach to understanding model and parameterization sensitivities to inform model development efforts.
Abstract This study investigated the sensitivity of pyrocumulonimbus (PyroCb) induced by the California Creek fire of 2020 to the amount and type of surface fuels, within the WRF‐SFIRE modeling system. Satellite data were used to derive fire arrival times to constrain fire progression, and to augment the fuel characterization with better estimates of combustible vegetation accounting for tree mortality. Machine learning was employed to classify standing dead vegetation from aerial imagery, which was then added as a custom fuel class along with the standard Anderson fuel categories. Simulations using this new fuel class produced a larger and more vigorous PyroCb than the control run, however, still under‐predicted the cloud top. Additional augmentation of fuel mass to represent the accumulation of dead vegetation on the forest floor further improved the simulations, demonstrating the efficacy of representing both dead standing and fallen vegetation to produce more realistic PyroCb and smoke simulations.
Abstract Previous work has shown that estimates of climate sensitivity vary over time in response to abrupt CO 2 forcing in climate model simulations. The energy fluxes that drive warming in response to increasing CO 2 also influence precipitation, which prompts the question: Does the precipitation response therefore also vary over time? We investigate by examining the response of precipitation to warming forced by greenhouse gases—the hydrological sensitivity—in a set of millennial‐length climate simulations with multiple climate models, Long Run Model Intercomparison Project (LongRunMIP). We compare hydrological sensitivity calculated from three different timescales of the simulations: years 1–20, 21–150, and 151–1000. We show that the hydrological sensitivity lacks a consistent dependence on timescale, in contrast to climate sensitivity. Decomposition of the surface energy budget reveals that the relative muting of the multi‐model mean hydrological sensitivity is driven by surface downwelling shortwave flux.
On 2015 October 2, MMS spacecraft observed an electron micro-injection event near the southern hemispheric high-altitude cusp, coinciding with intense wave activity across several frequency bands. Here, we investigated the MMS magnetic field and plasma during this event to explore cross-scale coupling among the wave modes. Employing the Hilbert-Huang transform, we perform an empirical mode decomposition to extract frequencies and amplitudes of the intrinsic mode functions (IMFs). In this analysis, we establish both linear and nonlinear relationships and examine the information transfer between the IMFs. Notably, the transfer entropy suggests that high frequency ion cyclotron waves may be driven by the mirror mode structures. Our case study effectively demonstrates the utility of the information theory based tools for studying cross-scale wave coupling phenomena.