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At least 217 records · Page 12

The Utility of Satellites and Autonomous Remote Sensing Platforms for Monitoring Offshore Aquaculture Farms: A Case Study for Canopy Forming Kelps

The emerging sector of offshore kelp aquaculture represents an opportunity to produce biofuel feedstock to help meet growing energy demand. Giant kelp represents an attractive aquaculture crop due to its rapid growth and production, however precision farming over large scales is required to make this crop economically viable. These demands necessitate high frequency monitoring to ensure outplant success, maximum production, and optimum quality of harvested biomass, while the long distance from shore and large necessary scales of production makes in person monitoring impractical. Remote sensing offers a practical monitoring solution and nascent imaging technologies could be leveraged to provide daily products of the kelp canopy and subsurface structures over unprecedented spatial scales. Here, we evaluate the efficacy of remote sensing from satellites and aerial and underwater autonomous vehicles as potential monitoring platforms for offshore kelp aquaculture farms. Decadal-scale analyses of the Southern California Bight showed that high offshore summertime cloud cover restricts the ability of satellite sensors to provide high frequency direct monitoring of these farms. By contrast, daily monitoring of offshore farms using sensors mounted to aerial and underwater drones seems promising. Small Unoccupied Aircraft Systems (sUAS) carrying lightweight optical sensors can provide estimates of canopy area, density, and tissue nitrogen content on the time and space scales necessary for observing changes in this highly dynamic species. Underwater color imagery can be rapidly classified using deep learning models to identify kelp outplants on a longline farm and high acoustic returns of kelp pneumatocysts from side scan sonar imagery signal an ability to monitor the subsurface development of kelp fronds. Current sensing technologies can be used to develop additional machine learning and spectral algorithms to monitor outplant health and canopy macromolecular content, however future developments in vehicle and infrastructure technologies are necessary to reduce costs and transcend operational limitations for continuous deployment in an offshore setting.

54 ENVIRONMENTAL SCIENCES↗

Visualizing Distributions from Multi-Return Lidar Data to Understand Forest Structure

Spatially distributed probability density functions (pdfs) are becoming relevant to the Earth scientists and ecologists because of stochastic models and new sensors that provide numerous realizations or data points per unit area. One source of these data is from multi-return airborne lidar, a type of laser that records multiple returns for each pulse of light sent towards the ground. Data from multi-return lidar is a vital tool in helping us understand the structure of forest canopies over large extents. This paper presents several new visualization tools that allow scientists to rapidly explore, interpret and discover characteristic distributions within the entire spatial field. The major contribution from-this work is a paradigm shift which allows ecologists to think of and analyze their data in terms of the distribution. This provides a way to reveal information on the modality and shape of the distribution previously not possible. The tools allow the scientists to depart from traditional parametric statistical analyses and to associate multimodal distribution characteristics to forest structures. Examples are given using data from High Island, southeast Alaska.

Kao, David L.↗

Modeling spatial patterns of longleaf pine needle dispersal using long-term data

Abstract Background Predicting patterns of fire behavior and effects in frequent fire forests relies on an understanding of fine-scale spatial patterns of available fuels. Leaf litter is a significant canopy-derived fine fuel in fire-maintained forests. Litter dispersal is dependent on foliage production, stand structure, and wind direction, but the relative importance of these factors is unknown. Results Using a 10-year litterfall dataset collected within eighteen 4-ha longleaf pine ( Pinus palustris Mill.) plots varying in canopy spatial pattern, we compared four spatially explicit models of annual needle litter dispersal: a model based only on basal area, an overstory abundance index (OAI) model, both isotropic and anisotropic litter kernel models, and a null model that assumed no spatial relationship. The best model was the anisotropic model (R 2 = 0.656) that incorporated tree size, location, and prevailing wind direction, followed by the isotropic model (R 2 = 0.612), basal area model (R 2 = 0.488), OAI model (R 2 = 0.416), and the null model (R 2 = 0.08). Conclusions As with previous studies, the predictive capability of the litter models was robust when internally validated with a subset of the original dataset (R 2 = 0.196–0.549); however, the models were less robust when challenged with an independent dataset (R 2 = 0.122–0.319) from novel forest stands. Our model validation underscores the need for rigorous tests with independent, external datasets to confirm the validity of litter dispersal models. These models can be used in the application of prescribed fire to estimate fuel distribution and loading, as well as aid in the fine tuning of fire behavior models to better understand fire outcomes across a range of forest canopy structures.

54 ENVIRONMENTAL SCIENCES↗

ICESat-2 Photon Classification: Finding Signal Photons in the ATL03 Geolocated Photon Data Product

ICESat-2 carries NASA's next-generation laser altimeter, ATLAS, (Advanced Topographic Laser Altimeter System), designed to measure changes in ice sheet height, sea ice freeboard, and vegetation canopy height. ATLAS contains a photon-counting lidar which transmits green (532-nm) pulses at 10kHz. Each pulse is split into 3 pairs of beams (one strong and one weak). Approximately 1014 photons per pulse travel from ATLAS through the atmosphere to reflect off the Earth's surface. Some return back into the ATLAS telescope where they are recorded. Photons from sunlight and instrument noise at the same wavelength are also recorded. The flight software time tags all photons within a 500m to 6 km range window and generates histograms. Using the histograms, it selects a telemetry window which varies from 20m over flat surfaces to hundreds of meters over rougher terrain. ATL03 contains the time, height (relative to the WGS-84 ellipsoid), latitude and longitude of every photon within the telemetry window. The basic challenge is to determine which of these photons were reflected off the surface. We have developed an algorithm that identifies these signal photons and assigns a confidence level (low, medium, or high) to each signal photon based on the signal to noise ratio. We present an overview of the signal identification algorithm and show the results on actual ICESat-2 data over ice sheet, sea ice, vegetated, and water surfaces. Higher level ATLAS products work with aggregations of the photons in order to determine the ellipsoidal height of the Earth, canopy height and structure, and other quantities of geophysical interest.

Remote Sensing↗

Forest structure and solar-induced fluorescence across intact and degraded forests in the Amazon

Tropical forest degradation (e.g., anthropogenic disturbances such as selective logging and fires) alters forest structure and function and influences the forest's carbon sink. In this study, we explored structure-function relationships across a variety of degradation levels in the southern Brazilian Amazon by 1) investigating how forest structural properties vary as a function of degradation history using airborne lidar data; 2) assessing the effects of degradation on solar-induced chlorophyll fluorescence (SIF) seasonality using TROPOMI data; and 3) quantifying the contribution of structural variables to SIF using multiple regression models with stepwise selection of lidar metrics. Forest degradation history was obtained through Landsat time-series classification. We found that fire, logging, and time since disturbance were major determinants of forest structure, and that forests affected by fires experienced larger variability in leaf area index (LAI), canopy height and vertical structure relative to logged and intact forests. Moreover, only recently burned forests showed significantly depressed SIF during the dry season compared to intact forests. Canopy height and the vertical distribution of foliage were the best predictors of SIF. Unexpectedly, we found that wet-season SIF was higher in active regenerating forests (~ 4 years after fires or logging) compared with intact forests, despite lower LAI. Furthermore, our findings help to elucidate the mechanisms of carbon accumulation in anthropogenically disturbed tropical forests and indicate that they can capture large amounts of carbon while recovering.

54 ENVIRONMENTAL SCIENCES↗

Interpreting vegetation reflectance measurements as a function of solar zenith angle

Spectral hemispherical-conical reflectances of a nadir looking sensor were taken throughout the day for a lodgepole pine and two grass canopies. Mathematical simulations of both spectral hemispherical-conical and bi-hemispherical reflectances were performed for two theoretical canopies of contrasting geometric structure. These results and comparisons with literature studies showed a great amount of variability of vegetation canopy reflectances as a function of solar zenith angle. Explanations for this variability are discussed and recommendations for further measurements are proposed.

Kimes, D. S.↗

Vegetation reflectance measurements as a function of solar zenith angle

An understanding of the behavior of vegetation canopy reflectance as a function of solar zenith angle is important to several remote sensing applications. Spectral hemispherical-conical reflectances of a nadir looking sensor were taken throughout the day of a lodgepole pine and two grass canopies. Mathematical simulations of both a spectral hemispherical-conical reflectance factor and a spectral bi-hemispherical reflectance were performed for two theoretical canopies of contrasting geometric structure. These results and results from literature studies showed a great amount of variability of vegetation canopy reflectances as a function of solar zenith angle. Explanations for this variability are discussed and recommendations for future measurements are proposed.

Kimes, D. S.↗

Mass fluxes and magnetic structures in the chromosphere and the transition region - Canopies

Preliminary results of applying a model of canopy-type magnetic lines to account for observed mass fluxes in the chromosphere and transiton region are presented. A set of center-to-limb data obtained in H-alpha and C IV, and to which the model is applied, is reported. The C IV line is assumed to form everywhere at the same height, and the H-alpha formation height is derived by assuming that the absorption coefficient is proportional to the local density. The density ratio between H-alpha and C IV levels is taken to be 100. From the results, it is concluded that the model accounts for the low ratio of radial velocities C IV/H-alpha at r = 0, the increase of H-alpha velocity near the limb, and the general center-to-limb behavior in both lines.

Mein, P.↗

Modeling directional thermal radiance from a forest canopy

The thermal vegetation canopy radiance model of Smith et al. (1981) is extended to account for the geometrically rough structure of a forest canopy. Fourier series expansion of a canopy height profile is used to calculate improved view facts which partially account for directional variations in canopy thermal radiance transfers. Predictions from the Smith model and the modified model are compared with experimental data obtained over a deciduous forest site in Tennessee. The results show that thermal radiance from a forest canopy depends on sensor viewing angle, solar position, and the degree of geometric roughness of the canopy surface. The maximum off-nadir angle variation in the original model was 1.6 deg C, compared with 4.4 C for the modified model.

Mcguire, M. J.↗

Pseudo-wavelet analysis of turbulence patterns in three vegetation layers

Ramp patterns in scalar traces such as temperature are the signature of coherent structures. A pseudo-wavelet analysis technique was developed in which ideal saw-tooth patterns of varying size were used as basis functions and fitted to temperature and velocity data. Data recorded from three very different vegetation stands were examined in this study. It was found that the most probable structure duration for the forest canopy was in the range 35-40 s, for the orchard canopy it was 20-25 s and for the maize it was 15-20 s. When expressed in non-dimensional form, the structure duration probability distribution for the maize canopy was about a decade larger than for the forest canopy, with the orchard canopy intermediate. The mean eddy duration versus wind shear relation falls on a narrow band for all three canopies, indicating that wind shear at the canopy top is the determining factor for the scale of the coherent eddies. The inverse of duration and intermittency of coherent structures exhibits a tendency of independence from wind shear at higher wind shear values. Coherent structures transport heat in a more efficient way than do smaller scale, less coherent motions. In all the canopies, the heat flux fractions associated with coherent structures are at least 10% higher than the corresponding time fraction.

Qiu, Jie↗

On Promoting the Use of Lidar Systems in Forest Ecosystem Research

Forest structure is an important driver of ecosystem dynamics, including the exchange of carbon, water and energy between canopies and the atmosphere. Structural descriptors are also used in numerous studies of eco-logical processes and ecosystem services. Over the last 20+ years, lidar technology has fundamentally changed the way we observe and describe forest structure, and it will continue to impact the ways in which we investigate and monitor the relations between forest structure and functions. Here we present the currently available lidar system types (ground, air, and space-based), we highlight opportunities and challenges associated with each system, as well as challenges associated with a wider use of lidar technology and wider availability of lidar derived products. We also suggest pathways for lidar to further contribute to addressing questions in forest ecosystem science and increase benefits to a wider community of researchers.

Lidar systems↗

The Laser Vegetation Imaging Sensor (LVIS): An Airborne Laser Altimeter for Mapping Vegetation and Topography

The Laser Vegetation Imaging Sensor (LVIS) is an airborne laser altimeter designed to quickly and extensively map surface topography as well as the relative heights of other reflecting surfaces within the laser footprint. Since 1997, this instrument has primarily been used as the airborne simulator for the Vegetation Canopy Lidar (VCL) mission, a spaceborne mission designed to measure tree height, vertical structure and ground topography (including sub-canopy topography). LVIS is capable of operating from 500 m to 10 km above ground level with footprint sizes from 1 to 60 m. Laser footprints can be randomly spaced within the 7 degree telescope field-of-view, constrained only by the operating frequency of the ND:YAG Q-switched laser (500 Hz). A significant innovation of the LVIS altimeter is that all ranging, waveform recording, and range gating are performed using a single digitizer, clock base, and detector. A portion of the outgoing laser pulse is fiber-optically fed into the detector used to collect the return signal and this entire time history of the outgoing and return pulses is digitized at 500 Msamp/sec. The ground return is then located using software digital signal processing, even in the presence of visibly opaque clouds. The surface height distribution of all reflecting surfaces within the laser footprint can be determined, for example, tree height and ground elevation. To date, the LVIS system has been used to monitor topographic change at Long Valley caldera, CA, as part of NASA's Topography and Surface Change program, and to map tree structure and sub-canopy topography at the La Selva Biological Research Station in Costa Rica, as part of the pre-launch calibration activities for the VCL mission. We present results that show the laser altimeter consistently and accurately maps surface topography, including sub-canopy topography, and vegetation height and structure. These results confirm the measurement concept of VCL and highlight the benefits of airborne prototypes of spaceborne instruments.

Bryan, J.↗

Improved assessment of mangrove forests in Sundarbans East Wildlife Sanctuary using WorldView 2 and TanDEM-X high resolution imagery

Recent developments of remote sensing techniques which can capture both the structure and function of the ecosystem provide a more representative view of the landscape. These unique Earth observations were used to help improve traditional forestry surveys by providing species-specific land cover classes for mangrove forests in the Sundarbans East Wildlife Sanctuary. By combining optical data from WorldView2 (WV2; 2 m pixel) and a canopy height model derived using radar data from TanDEM-X (TDX; 12 m pixel), we identified nine mangrove and five non-mangrove classes by following an Iterative Self-Organizing Data Analysis Algorithm. Three dominant mangrove species accounted for nearly 50% of the sanctuary. Heritieria fomes disproportionately covered the largest area at 43%, overturning previous field-based estimates of Excoecaria agallocha dominance. E. agallocha and Sonneratia apetala, covered 3% and 1.47% of the sanctuary, respectively. Four mixed species classes were also identified with clear vegetation zonation patterns that trended toward species homogeneity with increasing distance from shore. The overall land cover accuracy (WV2: 89.33%; WV2-TDX: 89.89%), the Kappa Coefficient (WV2:0.88; WV2-TDX: 0.89) and change statistics between WV2 and WV2-TDX landcover classifications indicate that the WV2 imagery can separate mangrove community types without structural data. The combination of the land cover classifications and the canopy height model indicated that H. fomes were not only the most dominant forest but also, on average, the tallest (12.3 m) among the other eight mangrove types. Our large-scale mapping with high resolution optical and radar platforms can capture subtle changes in mangrove vegetation and canopy structural gradients more accurately and be used to monitor biodiversity changes and Aichi Biodiversity Targets and Indicators, which would contribute to biodiversity policy updating.

Md Mizanur Rahman↗

Return Echoes from Medium-Large Footprint Laser Altimeters

For just over 10 years, NASA Goddard Space Flight Center has been at the forefront of developing return echo laser altimeters and analysis techniques for a variety of both space and airborne applications. In 1991, the Laser Remote Sensing Branch began investigating the use of medium-large diameter footprint return waveforms for measuring vegetation height and structure and sub-canopy topography. Over the last 8 years, using a variety of profiling and scanning laser altimeters (i.e. ATLAS, SLICER, SLA, and LVIS), we have collected return waveforms over a variety of terrestrial surface types. We describe the effects of instrument characteristics and within-footprint surface structure on the shape of the return waveform and suggest several techniques for extracting this information. Specifically for vegetation returns, we describe the effects of canopy parameters such as architecture and closure on the shape of the return waveform. Density profiles, statistics, and examples from a variety of vegetation types will be presented, as well as comparisons with small-footprint laser altimeter data.

Blair, J. Bryan↗

Observation of organized structure in turbulent flow within and above a forest canopy

Data obtained with seven triaxial sonic anemometer/thermometers and three Lyman-alpha hygrometers at an experimental site in Ontario, Canada reveal the coherent occurrence of ramp patterns of temperature and humidity at several levels within and above the deciduous forest considered. The ramps appear most clearly in the middle and upper portion of the forest, and near the top of the forest they are composed of a weak ejecting motion transporting warm and/or moist air out of the forest, followed by strong sweeps of cool and/or dry air penetrating into the canopy. In the middle and upper parts of the canopy, the sweeps are found to conduct a large proportion of the overall transfer between the forest and the lower atmosphere, with a lesser contribution from ejections.

Gao, W.↗

Investigating the Global Biogeophysical Impact of Area and Mass Based Wood Harvest in a Vegetation Demography Model

Wood harvesting alters land surface properties and energy redistribution, but there is a lack of studies estimating these changes on a global scale. We coupled a vegetation demographic model, the Functionally Assembled Terrestrial Ecosystem Simulator, with the E3SM land model to perform offline model simulation to investigate the land biogeophysical responses, including canopy coverage, leaf area index, albedo, surface roughness length, and energy fluxes, to historical wood harvest on the global scale. In this study, we found 50% less harvested carbon (C) when choosing the area-based harvest rate as driving data that has not been spatially harmonized, compared to reharmonized mass-based harvesting. By considering the uncertainty from reconstruction of historical wood harvest time series and the choice of wood harvest approach in the model, continuous wood harvest (1850–2015) results in 5%–10% of canopy coverage loss, contributing 0.5%–1% increase of albedo over disturbed land, which is much stronger than a non-demographic land surface model. Changes in energy flux from the wood harvest are negligible (<1%), but the responses of land surface properties vary (up to 30%) due to differences in model structure between the single canopy, sun-shade leaf model and vegetation demographic model.

Shu, Shijie [Lawrence Berkeley National Laboratory↗

Advanced NASA Earth Science Mission Concept for Vegetation 3D Structure, Biomass and Disturbance

Carbon in forest canopies represents about 85% of the total carbon in the Earth's aboveground biomass (Olson et al., 1983). A major source of uncertainty in global carbon budgets derives from large errors in the current estimates of these carbon stocks (IPCC, 2001). The magnitudes and distributions of terrestrial carbon storage along with changes in sources and sinks for atmospheric C02 due to land use change remain the most significant uncertainties in Earth's carbon budget. These uncertainties severely limit accurate terrestrial carbon accounting; our ability to evaluate terrestrial carbon management schemes; and the veracity of atmospheric C02 projections in response to further fossil fuel combustion and other human activities. Measurements of vegetation three-dimensional (3D) structural characteristics over the Earth's land surface are needed to estimate biomass and carbon stocks and to quantify biomass recovery following disturbance. These measurements include vegetation height, the vertical profile of canopy elements (i.e., leaves, stems, branches), andlor the volume scattering of canopy elements. They are critical for reducing uncertainties in the global carbon budget. Disturbance by natural phenomena, such as fire or wind, as well as by human activities, such as forest harvest, and subsequent recovery, complicate the quantification of carbon storage and release. The resulting spatial and temporal heterogeneity of terrestrial biomass and carbon in vegetation make it very difficult to estimate terrestrial carbon stocks and quantify their dynamics. Vegetation height profiles and disturbance recovery patterns are also required to assess ecosystem health and characterize habitat. The three-dimensional structure of vegetation provides habitats for many species and is a control on biodiversity. Canopy height and structure influence habitat use and specialization, two fundamental processes that modify species richness and abundance across ecosystems. Accurate and consistent 3D measurements of forest structure at the landscape scale are needed for assessing impacts to animal habitats and biodiversity following disturbance.

Ranson, K. Jon↗

A plant canopy light absorption model with application to wheat

From the light absorption model the absorption of light in the photosynthetically active region of the spectrum was calculated for a Penjamo wheat crop for several situations including: (1) the percent absorption of the incident radiation by a canopy having a four layer structure; (2) the percent absorption of light by the individual layers within a four layer canopy and by the underlying soil; (3) the percent absorption of light by each vegetative canopy layer for variable sun angle; and (4) the cumulative solar energy absorbed by the developing wheat canopy as it progresses from a single layer through its growth stages to a three layer canopy. This calculation was also presented as a function of the leaf area index.

Chance, J. E.↗