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At least 217 records · Page 12

On the radiative balance of the stratosphere

The zonally averaged radiative balance of the stratosphere based on the measured temperature structure and gas concentrations available from the LIMS instrument is examined in detail. These data are extant for seven months (November 1978 to May 1979). The contribution to the net radiative balance due to the individual components of solar heating and longwave cooling is discussed. These components are further broken down by individual gas constituent to understand the role each gas plays in determining the total radiative heating/cooling. The deficiencies of employing a latitudinally and temporally independent Newtonian damping coefficient are also explored. In particular, the Newtonian damping time is shown to vary by a factor of two in both latitude and season. Net zonally averaged stratospheric radiative heating for the seven months of LIMS data are presented. These net heating rates are important in determining the role of advective transport of chemical constituents. An important feature that appears in the derived radiative heating is the existence of a region of net radiative cooling near the equatorial stratopause.

Kiehl, J. T.↗

Sensitivity of Age-of-Air Calculations to the Choice of Advection Scheme

The age of air has recently emerged as a diagnostic of atmospheric transport unaffected by chemical parameterizations, and the features in the age distributions computed in models have been interpreted in terms of the models' large-scale circulation field. This study shows, however, that in addition to the simulated large-scale circulation, three-dimensional age calculations can also be affected by the choice of advection scheme employed in solving the tracer continuity equation, Specifically, using the 3.0deg latitude X 3.6deg longitude and 40 vertical level version of the Geophysical Fluid Dynamics Laboratory SKYHI GCM and six online transport schemes ranging from Eulerian through semi-Lagrangian to fully Lagrangian, it will be demonstrated that the oldest ages are obtained using the nondiffusive centered-difference schemes while the youngest ages are computed with a semi-Lagrangian transport (SLT) scheme. The centered- difference schemes are capable of producing ages older than 10 years in the mesosphere, thus eliminating the "young bias" found in previous age-of-air calculations. At this stage, only limited intuitive explanations can be advanced for this sensitivity of age-of-air calculations to the choice of advection scheme, In particular, age distributions computed online with the National Center for Atmospheric Research Community Climate Model (MACCM3) using different varieties of the SLT scheme are substantially older than the SKYHI SLT distribution. The different varieties, including a noninterpolating-in-the-vertical version (which is essentially centered-difference in the vertical), also produce a narrower range of age distributions than the suite of advection schemes employed in the SKYHI model. While additional MACCM3 experiments with a wider range of schemes would be necessary to provide more definitive insights, the older and less variable MACCM3 age distributions can plausibly be interpreted as being due to the semi-implicit semi-Lagrangian dynamics employed in the MACCM3. This type of dynamical core (employed with a 60-min time step) is likely to reduce SLT's interpolation errors that are compounded by the short-term variability characteristic of the explicit centered-difference dynamics employed in the SKYHI model (time step of 3 min). In the extreme case of a very slowly varying circulation, the choice of advection scheme has no effect on two-dimensional (latitude-height) age-of-air calculations, owing to the smooth nature of the transport circulation in 2D models. These results suggest that nondiffusive schemes may be the preferred choice for multiyear simulations of tracers not overly sensitive to the requirement of monotonicity (this category includes many greenhouse gases). At the same time, age-of-air calculations offer a simple quantitative diagnostic of a scheme's long-term diffusive properties and may help in the evaluation of dynamical cores in multiyear integrations. On the other hand, the sensitivity of the computed ages to the model numerics calls for caution in using age of air as a diagnostic of a GCM's large-scale circulation field.

Eluszkiewicz, Janusz↗

Oxytropism: a new twist in pollen tube orientation

Chemical gradients and structural features within the pistil have been previously proposed as factors determining the directionality of pollen tube growth. In this study, we examine the behavior of pollen of eight species germinated in a dynamic oxygen gradient. While the germination rates of some species decreased directly with decreasing oxygen tension, other species showed no decrease in germination at oxygen tensions as low as 2 kPa. In one species, germination was consistently greater at decreased oxygen tensions than at ambient atmospheric levels. In three of the eight species tested, the developing pollen tube showed clear directional growth away from the more-oxygenated regions of the growth medium, while in one species growth was towards the more-oxygenated region. The remaining four species showed random tube growth. The pattern of oxytropic responses among the taxa suggests that this tropic behavior is both widespread and phylogenetically unpredictable.

NASA Discipline Plant Biology↗

Isochemical Characteristics of the Clay-Sulfate Transition in Gale Crater, Mars: APXS Results From Mont Mercou to the Marker Band Valley

During sols 3052-3572 (March 2021 to August 2022), Curiosity traversed a region in Gale crater where orbital observations predicted a vertical stratigraphic transition from a phyllosilicate unit to the overlying layered sulfates of Mt. Sharp [1, 2]. This region was informally named the clay-sulfate transition (CST). The Alpha Particle X-ray Spectrometer (APXS) was systematically deployed to sedimentary bedrock and selected diagenetic features to analyze possible chemical changes with increasing elevation (a proxy for increasing stratigraphic position). The occurrence of Ca- and Mg-sulfate was a particular focus. Here, we present results from the APXS investigation of the CST, as well as results from the first targets of the sulfate unit located in Marker Band Valley (MBV).

J.A. Berger↗

Special Grain Boundaries in NiTi Shape Memory Alloys as Sites for Preferential Martensite Nucleation

Shape memory alloys (SMAs) exhibit unique thermomechanical properties due to a reversible martensitic transformation which can be controlled via chemical composition and microstructural features. Among the latter, grain boundaries (GBs) are key in determining how the transformation nucleates and propagates. We performed molecular dynamics simulations to examine the roles of a few special GBs in the austenite phase of NiTi. The GBs can act as preferential host sites for martensite nuclei which can substantially lower the nucleation barrier for transformation and thereby result in reduced thermal hysteresis, an important SMA property for cyclic actuation applications. Free energy calculations show that a characteristic of these GBs is a negative entropy which drops sharply close to the transformation temperature, an anomalous behavior for GBs with fixed composition which is a direct result of the martensitic transformation. We discuss implications of these results with respect to SMA processing techniques for achieving improved properties.

Gabriel Plummer↗

Plan for a Data Base Approach to Evaluating LWR Plant Integration with Hydrogen and Industrial Facilities

The purpose of this report is to provide an outline and scope of a database tool that could be used to identify the most beneficial locations to site a hydrogen, chemical facility or other industrial facility that would be powered by nuclear energy. This energy may be in the form of electricity produced by the plant, heat in the form of steam or both. In addition, this siting tool should consider factors such as economics, geography, industries, residences, geological hydrogen storage, and key infrastructure. The infrastructure to be considered could include pipelines or other storage and transportation facilities to carry the created products from the production facility to the end user. Also considered should be infrastructure that could deliver needed chemicals or gasses to allow the production of desired products such as ammonia or biofuels. This data base tool should allow a screening study of all U.S. nuclear plants to identify opportunities and barriers to creating hydrogen hubs around nuclear power plants. For this effort, it has been decided that the Siting Tool for Advanced Nuclear Development (STAND) would be used to conduct this screening study which is a follow-on research project to this present effort. Currently, plans are being developed to modify the STAND tool to provide the capability necessary to perform screening of each US commercial nuclear plant to identify the best locations to site hydrogen or chemical production facilities. Many features of the current STAND tool will be employed to meet this objective, but additional infrastructure data (such as the location of pipelines) may need to be added to allow these locations to be fully vetted. In addition, new analysis capabilities may need to be added so economic considerations can be understood

11 NUCLEAR FUEL CYCLE AND FUEL MATERIALS↗

Deep Learning on Multimodal Chemical and Whole Slide Imaging Data for Predicting Prostate Cancer Directly from Tissue Images

Prostate cancer is one of the most common cancers globally and is the second most common cancer in the male population in the US. Here we develop a study based on correlating the hematoxylin and eosin (H&E)-stained biopsy data with MALDI mass-spectrometric imaging data of the corresponding tissue to determine the cancerous regions and their unique chemical signatures and variations of the predicted regions with original pathological annotations. We obtain features from high-resolution optical micrographs of whole slide H&E stained data through deep learning and spatially register them with mass spectrometry imaging (MSI) data to correlate the chemical signature with the tissue anatomy of the data. We then use the learned correlation to predict prostate cancer from observed H&E images using trained coregistered MSI data. This multimodal approach can predict cancerous regions with ~80% accuracy, which indicates a correlation between optical H&E features and chemical information found in MSI. Further, we show that such paired multimodal data can be used for training feature extraction networks on H&E data which bypasses the need to acquire expensive MSI data and eliminates the need for manual annotation saving valuable time. Two chemical biomarkers were also found to be predicting the ground truth cancerous regions. This study shows promise in generating improved patient treatment trajectories by predicting prostate cancer directly from readily available H&E-stained biopsy images aided by coregistered MSI data.

60 APPLIED LIFE SCIENCES↗

Quantum biological insights into CRISPR-Cas9 sgRNA efficiency from explainable-AI driven feature engineering

Abstract CRISPR-Cas9 tools have transformed genetic manipulation capabilities in the laboratory. Empirical rules-of-thumb have been developed for only a narrow range of model organisms, and mechanistic underpinnings for sgRNA efficiency remain poorly understood. This work establishes a novel feature set and new public resource, produced with quantum chemical tensors, for interpreting and predicting sgRNA efficiency. Feature engineering for sgRNA efficiency is performed using an explainable-artificial intelligence model: iterative Random Forest (iRF). By encoding quantitative attributes of position-specific sequences for Escherichia coli sgRNAs, we identify important traits for sgRNA design in bacterial species. Additionally, we show that expanding positional encoding to quantum descriptors of base-pair, dimer, trimer, and tetramer sequences captures intricate interactions in local and neighboring nucleotides of the target DNA. These features highlight variation in CRISPR-Cas9 sgRNA dynamics between E. coli and H. sapiens genomes. These novel encodings of sgRNAs enhance our understanding of the elaborate quantum biological processes involved in CRISPR-Cas9 machinery.

59 BASIC BIOLOGICAL SCIENCES↗

Spectral Ratio Imaging with Hyperion Satellite Data for Geological Mapping

Since the advent of LANDSAT I in 1972, many different multispectral satellites have been orbited by the U.S. and other countries. These satellites have varied from 4 spectral bands in LANDSAT I to 14 spectral bands in the ASTER sensor aboard the TERRA space platform. Hyperion is a relatively new hyperspectral sensor with over 220 spectral bands. The huge increase in the number of spectral bands offers a substantial challenge to computers and analysts alike when it comes to the task of mapping features on the basis of chemical composition, especially if little or no ground truth is available beforehand from the area being mapped. One approach is the theoretical approach of the modeler, where all extraneous information (atmospheric attenuation, sensor electronic gain and offset, etc.) is subtracted off and divided out, and laboratory (or field) spectra of materials are used as training sets to map features in the scene of similar composition. This approach is very difficult to keep accurate because of variations in the atmosphere, solar illumination, and sensor electronic gain and offset that are not always perfectly recorded or accounted for. For instance, to apply laboratory or field spectra of materials as data sets from the theoretical approach, the header information of the files must reflect the correct, up-to-date sensor electronic gain and offset and the analyst must pick the exact atmospheric model that is appropriate for the day of data collection in order for classification procedures to accurately match pixels in the scene with the laboratory or field spectrum of a desired target on the basis of the hyperspectral data. The modeling process is so complex that it is difficult to tell when it is operating well or determine how to fix it when it is incorrect. Recently RSI has announced that the latest version of their ENVI software package is not performing atmospheric corrections correctly with the FLAASH atmospheric model. It took a long time to determine that it was wrong, and may take an equally long time (or longer) to fix.

Vincent, Robert K.↗

Enhancing Chemical Stability and Suppressing Ion Migration in CH 3 NH 3 PbI 3 Perovskite Solar Cells via Direct Backbone Attachment of Polyesters on Grain Boundaries

Organic–inorganic halide perovskites feature excellent optoelectronic properties but poor chemical stability. While passivating perovskite grain boundary (GB) by polymers shows prospects on long-term performance of perovskite solar cells (PSCs), its detailed impact on the ion migration phenomenon, which largely deteriorates the PSC stability, remains less probed. In this work, we introduce a new polar polymer, polycaprolactone (PCL), to passivate GBs of methylammonium lead triiodide (MAPbI 3 ) perovskite with only 1–2 polymer monolayers via direct backbone attachment. The PSCs with passivated MAPbI 3 , using a classic but less stable Spiro-OMeTAD (2,2',7,7'-tetrakis[N,N-di(4-methoxyphenyl)amino]-9,9'-spirobifluorene) hole transport layer (HTL), exhibit improved power conversion efficiencies up to 20.1%, with 90% of the initial PCE being preserved after 400 h ambient storage, and 80% even after 100 h, 85 °C aging. The improved PSC stability indicates critical roles of PCL GB passivation in retarding moisture-induced decomposition and suppressing ion migration within the perovskite. Furthermore, time-of-flight secondary ion mass spectrometry reveals that I– ions can actively migrate into the electrode, HTL, and their interface in nonpassivated PSCs, even without an externally applied electric field, while such migration is significantly mitigated in PCL-passivated PSCs. This effective GB passivation by PCL suggests an important potential of polymer additives toward the development of stable high-performance PSCs.

36 MATERIALS SCIENCE↗

Synthesis of the Candidate Topological Compound Ni 3 Pb 2

Spin-orbit coupling enables the realization of topologically nontrivial ground states. As spin-orbit coupling increases with increasing atomic number, compounds featuring heavy elements, such as lead, offer a pathway toward creating new topologically nontrivial materials. Here, by employing a high-pressure flux synthesis method, we synthesized single crystals of Ni 3 Pb 2 , the first structurally characterized bulk binary phase in the Ni-Pb system. Combining experimental and theoretical techniques, we examined structure and bonding in Ni 3 Pb 2 , revealing the impact of chemical substitutions on electronic structure features of importance for controlling topological behavior. From these results, we determined that Ni 3 Pb 2 completes a series of structurally related transition-metal-heavy main group intermetallic materials that exhibit diverse electronic structures, opening a platform for synthetically tunable topologically nontrivial materials.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Coupling Chemical Heat Pump with Nuclear Reactor for Temperature Amplification by Delivering Process Heat and Electricity: A Techno-Economic Analysis

The energy economy is continually evolving in response to socio-political factors in the nature of primary energy sources, their conversions to useful forms, such as electricity and heat, and their utilization in different sectors. Nuclear energy has a crucial role to play in the evolution of energy economy due to its clean and non-carbon-emitting characteristics. A techno-economic analysis was undertaken to establish the viability of selling heat along with electricity for an advanced 100 MWth small modular reactor (SMR) and four nuclear hybrid energy system (NHES) configurations featuring the SMR paired with chemical heat pump (ChHP) systems providing a thermal output ranging from 1 to 50 MWth. Net present value, payback period, discounted cash flow rate of return, and levelized cost of energy were evaluated for these systems for different regions of U.S. reflecting a range of electricity and thermal energy costs. The analysis indicated that selling heat to high temperature industrial processes showed profitable outcomes compared to the sale of only electricity. Higher carbon taxes improved the economic parameters of the NHES alternatives significantly. Providing heat to high temperature industries could be very beneficial, helping to cut down the greenhouse gases emission by reducing the fossil fuel consumption.

Gupta, Aman↗

Presolar isotopic and chemical signatures in hibonite-bearing refractory inclusions from the Murchison carbonaceous chondrite

The mineralogy and the major-element composition of phases within individual hibonite-bearing inclusions were determined, using SEM with EDAX analysis, for 37 hibonite-bearing inclusions which comprised 26 spinel-hibonite-perovskite inclusions, ten platy hibonite crystal fragments, and one blue hibonite aggregate. Results from all inclusions studied indicated the presence of correlations in hibonite isotopic systematics and chemistry. Namely, no inclusion had both a large Ti-50 anomaly and radiogenic Mg-26, and inclusions that were depleted in the ultrarefractory elements had radiogenic Mg-26 with the exception of those which a had a large Ti-50 anomaly. These features establish a relationship between chemical and isotopic characteristics of the inclusions which must predate their formation. It is suggested that depletions in ultrarefractory elements observed in these inclusions may be a memory of stellar condensation and are not necessarily related to a condensation event in the solar nebula.

Ireland, Trevor R.↗

Electroanalytical characterization of Np( VI )/Np( V ) redox in a pentadentate ligand environment and stabilization of [Np V O 2 ] + by hydrogen bonding

The redox chemistry of the actinyl cations (AnO 2 n+ ) heavily influences their reactivity and speciation in solution, but the redox properties of the actinyls in non-aqueous media have received far less attention than they deserve. Here, the non-aqueous electrochemistry of a chemically reversible Np(VI)/Np(V) redox manifold is reported in both protic (CH 3 OH) and aprotic (CH 3 CN) organic media. Using a neutral Np(VI) complex supported by a chelating and strongly donating pentadentate ligand that was fully characterized in prior work, a clean Np(VI)/Np(V) redox couple was found to be accessible under ambient conditions. Coupled electrochemical and spectroscopic studies, as well as simulations of cyclic voltammetry data, confirm the 1e− nature of this couple and establish it to be chemically reversible and nearly electrochemically reversible as well. Bulk electrolysis of a solution of the neutral Np(VI) complex facilitated isolation of the corresponding anionic and monomeric Np(V) species. Data from X-ray diffraction analysis as well as optical and vibrational spectroscopies provide strong evidence in support of metal-centered reduction and the Np(V) oxidation state, findings that are in accord with the measured reduction potentials. Distinctive hydrogen bonding interactions between the terminal (yl) oxo groups and water molecules appear to stabilize the isolated Np(V) species in the solid state, providing insight into the features that afford the uncommon chemically reversible redox encountered in this system.

Mikeska, Emily R.↗

DNA Reaction–Diffusion Attractor Patterns

Abstract Living systems can form and recover complex chemical patterns with precisely sized features in the ranges of tens or hundreds of microns. We show how designed reaction–diffusion processes can likewise produce precise patterns, termed attractor patterns, that reform their precise shape after being perturbed. We use oligonucleotide reaction networks, photolithography, and microfluidic delivery to form precisely controlled attractor patterns and study the responses of these patterns to different localized perturbations. Linear and “hill”‐shaped patterns formed and stabilized into shapes and at time scales consistent with reaction–diffusion models. When patterns were perturbed in particular locations with UV light, they reliably reformed their steady‐state profiles. Recovery also occurred after repeated perturbations. By designing the far‐from‐equilibrium dynamics of a chemical system, this study shows how it is possible to design spatial patterns of molecules that are sustained and regenerated by continually evolving towards a specific steady state configuration.

Dorsey, Phillip James↗

DNA Reaction–Diffusion Attractor Patterns

Living systems can form and recover complex chemical patterns with precisely sized features in the ranges of tens or hundreds of microns. We show how designed reaction-diffusion processes can likewise produce precise patterns, termed attractor patterns, that reform their precise shape after being perturbed. We use oligonucleotide reaction networks, photolithography and microfluidic delivery to form precisely controlled attractor patterns and study the responses of these patterns to different localized perturbations. Linear and ‘hill’-shaped patterns formed and stabilized into shapes and at time scales consistent with reaction-diffusion models. When patterns were perturbed in particular locations with UV light, they reliably reformed their steady state profiles. Recovery also occurred after repeated perturbations. As a result, by designing the far-from-equilibrium dynamics of a chemical system, this study shows how it is possible to design spatial patterns of molecules that are sustained and regenerated by continually evolving towards a specific steady state configuration

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Hybrid chemical characterization of latent images in EUV resist with 12 nm half-pitch features

With the advancement of high numerical aperture extreme ultraviolet (EUV) lithography, the new platform will enable chipmakers to achieve critical dimensions of 8 nm. However, resist materials face significant challenges in delivering increased sensitivity while managing rising stochastic variations. We aim to develop comprehensive techniques to characterize the chemical profile of latent images, stored in EUV resists after exposure and postexposure baking, which is essential for understanding the origin of stochastic effects. Infrared photo-induced force microscopy (IR PiFM) is a bimodal atomic force microscopy technique combined with an infrared light source, allowing for simultaneous sub-5 nm topographic and chemical characterization within a localized environment. Critical-dimension resonant soft X-ray scatterometry (CD-RSoXS) provides statistical data that reveal structural and chemical information for comparative analysis. For the first time, IR PiFM has been used to chemically map the latent images of EUV resists (after exposure and postexposure baking) at a record high resolution of 12 nm half-pitch, enabling nondestructive analysis of patterns prior to development. Furthermore, CD-RSoXS offers direct experimental observation and comparison of exposed, postexposure baked, and developed patterns, which align with the IR PiFM results. We demonstrate that the IR PiFM technique offers valuable insights into both high spatial resolution and local chemical information simultaneously. In addition, CD-RSoXS provides statistical results that support our main findings. This hybrid metrology approach leverages a multifaceted dataset by combining the most reliable information from each source, which is essential for a comprehensive understanding of the stochastic effects in EUV lithography processes.

O’Reilly, Padraic↗