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At least 217 records · Page 12

Enhancing dimensionality prediction in hybrid metal halides via feature engineering and class-imbalance mitigation

We present a machine learning (ML) framework for predicting the structural dimensionality of hybrid metal halides (HMHs), including organic-inorganic perovskites, using a combination of chemically-informed feature engineering and advanced class-imbalance handling techniques. This study is motivated by the small and highly imbalanced nature of experimentally available HMH datasets, which limits the applicability and reliability of conventional ML approaches. The dataset, consisting of 494 HMH structures, is highly imbalanced across dimensionality classes (0D, 1D, 2D, 3D), posing significant challenges to predictive modeling. To mitigate this limitation, the dataset was augmented to 1336 samples using the synthetic minority oversampling technique, enabling improved learning of underrepresented dimensionality classes while preserving chemically meaningful feature relationships. We developed interaction-based descriptors designed to capture coupled steric and polarity effects relevant to dimensionality prediction, which are not readily captured by standard single-parameter or composition-only descriptors. These descriptors are integrated into a multi-stage workflow combining feature selection, ensemble stacking, and performance optimization. Our approach significantly improves F1-scores for underrepresented classes, achieving robust cross-validation performance across all dimensionalities. This work demonstrates a generalizable strategy for extracting reliable and interpretable structure–dimensionality relationships from limited experimental data, enabling pre-synthesis screening of organic cations and providing a practical blueprint for small-data ML in hybrid materials systems.

36 MATERIALS SCIENCE↗

Formation and evolution of protostellar accretion discs – II. From 3D simulation to a simple semi-analytic model of Class 0/I discs

Here we use a 3D radiative non-ideal magnetohydrodynamic simulation to investigate the formation and evolution of a young protostellar disc from a magnetized pre-stellar core. The simulation covers the first ${\sim }10\, {\rm kyr}$ after protostar formation and shows a massive, weakly magnetized disc with radius that initially grows and then saturates at ${\sim }30\, {\rm au}$. The disc is gravitationally unstable with prominent large-amplitude spiral arms. We use our simulation results and a series of physical arguments to construct a predictive and quantitative physical picture of Class 0/I protostellar disc evolution from several aspects, including (i) the angular-momentum redistribution in the disc, self-regulated by gravitational instability to make most of the disc marginally unstable; (ii) the thermal profile of the disc, well-approximated by a balance between radiative cooling and accretion heating; and (iii) the magnetic-field strength and magnetic-braking rate inside the disc, regulated by non-ideal magnetic diffusion. Using these physical insights, we build a simple 1D semi-analytic model of disc evolution. We show that this 1D model, when coupled to a computationally inexpensive simulation for the evolution of the surrounding pseudo-disc, can be used reliably to predict disc evolution in the Class 0/I phase. The predicted long-term evolution of disc size, which saturates at ${\sim }30\, {\rm au}$ and eventually shrinks, is consistent with a recent observational survey of Class 0/I discs. Such hierarchical modelling of disc evolution circumvents the computational difficulty of tracing disc evolution through Class 0/I phase with direct, numerically converged simulations.

79 ASTRONOMY AND ASTROPHYSICS↗

Survey of the class of isovalent antiperovskite alkaline-earth pnictide compounds

The few reported members of the antiperovskite structure class $Ae_3Pn_APn_B$ of alkaline earth $(Ae = Ca$,Sr,Ba) pnictides $(Pn = N$,P,As,Sb,Bi) compounds are all based on the $B$-site anion $Pn_B$ = N . All fit can be categorized as narrow gap semiconductors, making them of interest for several reasons. Because chemical reasoning suggests that more members of this class may be stable, we provide here a density functional theory (DFT) based survey of this entire class of 3 x 5 x 5 compounds. We determine first the relative energetic stability of the distribution of pairs of $Pn$ ions in the $A$ and $B$ sites of the structure, finding that the $B$ site always favors the small pnictogen anion. The trends of the calculated energy gaps with $Ae$ cation and $Pn$ anions are determined, and we study effects of spin-orbit coupling as well as two types of gap corrections to the conventional DFT electronic spectrum. Because there have been suggestions that this class harbors topological insulating phases, we have given this possibility attention and found that energy gap corrections indicate the cubic structures will provide at most a few topological insulators. Structural instability is addressed by calculating phonon dispersion curves for a few compounds, with one outcome being that distorted structures should be investigated further for thermoelectric and topological character. Examples of the interplay between spin-orbit coupling and strain on the topological nature are provided. Finally, a case study of $Ca_3BiP$ including the effect of strain illustrates how a topological semimetal can be transformed into topological insulator and Dirac semimetal.

75 CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND↗

Structural analysis of DNA binding by C.Csp231I, a member of a novel class of R-M controller proteins regulating gene expression

The structure of the new class of controller proteins (exemplified by C.Csp231I) in complex with its 21 bp DNA-recognition sequence is presented, and the molecular basis of sequence recognition in this class of proteins is discussed. An unusual extended spacer between the dimer binding sites suggests a novel interaction between the two C-protein dimers. In a wide variety of bacterial restriction–modification systems, a regulatory ‘controller’ protein (or C-protein) is required for effective transcription of its own gene and for transcription of the endonuclease gene found on the same operon. We have recently turned our attention to a new class of controller proteins (exemplified by C.Csp231I) that have quite novel features, including a much larger DNA-binding site with an 18 bp (∼60 Å) spacer between the two palindromic DNA-binding sequences and a very different recognition sequence from the canonical GACT/AGTC. Using X-ray crystallography, the structure of the protein in complex with its 21 bp DNA-recognition sequence was solved to 1.8 Å resolution, and the molecular basis of sequence recognition in this class of proteins was elucidated. An unusual aspect of the promoter sequence is the extended spacer between the dimer binding sites, suggesting a novel interaction between the two C-protein dimers when bound to both recognition sites correctly spaced on the DNA. A U-bend model is proposed for this tetrameric complex, based on the results of gel-mobility assays, hydrodynamic analysis and the observation of key contacts at the interface between dimers in the crystal.

75 CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND↗

Mechanisms of proton relay and product release by Class A β-lactamase at ultrahigh resolution

The beta-lactam antibiotics inhibit penicillin-binding proteins (PBPs) by forming a stable, covalent, acyl-enzyme complex. During the evolution from PBPs to Class A beta-lactamases, the beta-lactamases acquired Glu166 to activate a catalytic water and cleave the acyl-enzyme bond. Here we present three product complex crystal structures of CTX-M-14 Class A beta-lactamase with a ruthenocene-conjugated penicillin-a 0.85 angstrom resolution structure of E166A mutant complexed with the penilloate product, a 1.30 angstrom resolution complex structure of the same mutant with the penicilloate product, and a 1.18 angstrom resolution complex structure of S70G mutant with a penicilloate product epimer-shedding light on the catalytic mechanisms and product inhibition of PBPs and Class A beta-lactamases. The E166A-penilloate complex captured the hydrogen bonding network following the protonation of the leaving group and, for the first time, unambiguously show that the ring nitrogen donates a proton to Ser130, which in turn donates a proton to Lys73. These observations indicate that in the absence of Glu166, the equivalent lysine would be neutral in PBPs and therefore capable of serving as the general base to activate the catalytic serine. Together with previous results, this structure suggests a common proton relay network shared by Class A beta-lactamases and PBPs, from the catalytic serine to the lysine, and ultimately to the ring nitrogen. Additionally, the E166A-penicilloate complex reveals previously unseen conformational changes of key catalytic residues during the release of the product, and is the first structure to capture the hydrolyzed product in the presence of an unmutated catalytic serine.

59 BASIC BIOLOGICAL SCIENCES↗

Design by analysis rules for ASME Section III, Division 5, Class B components

The current rules for elevated temperature ASME Section III, Division 5, Class B components, other than piping, were basically adapted from the Design-by-Rule approach for Section VIII, Division 1 vessels. A goal of the proposed new rules is to explicitly account for the design life and cyclic service while recognizing the less-rigorous requirements commensurate with lesser safety consideration. Further goals are to maximize the use of modern computational technology, for example finite element analysis in conjunction with reference stress concepts, and to avoid the need for stress classification. This paper summarizes the work done to address these issues. A summary of the design-by-analysis for primary loads, strain limit evaluation, and creep-fatigue damage assessment is presented. The proposed design-by-analysis creep-fatigue damage calculation approach uses a new elastic follow-up-based Isochronous Stress Strain Curve stress relaxation procedure. A set of sample problems are selected to validate the proposed design-by-analysis rules for creep-fatigue damage assessment. The proposed Class B rules are evaluated against the Class A elastic design rules and the experimental data obtained from a family of a simplified model test-based key-feature test results. The proposed Class B creep-fatigue damage assessment methodology yields conservative design cycles estimates compared to the experimental results.

36 MATERIALS SCIENCE↗

Sci-Sat AM: Radiation Dosimetry and Practical Therapy Solutions - 12: Suitability of plan class specific reference fields for estimating dosimeter correction factors for small clinical CyberKnife fields

Purpose: The purpose of this work is to investigate the utility of plan class specific reference (PCSR) fields for predicting dosimeter response within isocentric and non-isocentric composite clinical fields using the smallest fields employed by the CyberKnife radiosurgery system. Methods: Monte Carlo dosimeter response correction factors (CFs) were calculated for a plastic scintillator and microchamber dosimeter in 21 clinical fields and 9 candidate plan-class PCSR fields which employ the 5, 7.5 and 10 mm diameter collimators. Measurements were performed in 5 PCSR fields to confirm the predicted relative response of detectors in the same field. Results: Ratios of corrected measured dose in the PCSR fields agree to within 1% of unity. Calculated CFs for isocentric fields agree within 1.5% of those for PCSR fields. Large and variable microchamber CFs are required for non-isocentric fields, with differences as high as 5% between different clinical fields in the same plan class and 4% within the same field depending on the point of measurement. Non-isocentric PCSR fields constructed to have relatively homogenous dose over a region larger than the detector have very different ion chamber CFs from clinical fields. The plastic scintillator detector has much more consistent response within each plan class but still require 3–4% corrections in some fields. Conclusions: While the PCSR field concept is useful for small isocentric fields, this approach may not be appropriate for non-isocentric clinical fields which exhibit large and variable ion chamber CFs which differ significantly from CFs for homogenous field PCSRs.

61 RADIATION PROTECTION AND DOSIMETRY↗

Cultivation of Methanonezhaarchaeia, the third class of methanogens within the phylum Thermoproteota

Methane is a potent greenhouse gas, largely produced by methanogenic archaea, contributing to Earth’s dynamic climate and biogeochemical cycles. In the past decade, metagenomics revealed that lineages outside of the Euryarchaeota superphylum encode genes for methanogenesis. This was recently confirmed through the cultivation of two classes of methanogenic Thermoproteota. Thus far, all methanogens within the Thermoproteota are predicted or were shown to be methylotrophic. The only exception to this are the Nezhaarchaea, for which metagenomic predictions suggest they are CO 2 -reducing methanogens. Here, we demonstrate methanogenic activity in a third class of Thermoproteota, the Methanonezhaarchaeia. Contrary to genomic predictions for this class, we cultivated a methylotrophic species, Candidatus Methanonezhaarchaeum fastidiosum YNP3N, highlighting the importance of testing metagenomic hypotheses through experimentation. We investigate the metabolic diversity of Methanonezhaarchaeia, including metabolic modifications accompanying frequent loss of methanogenesis in this class. This highlights gaps in our understanding of the biochemistry, diversity, and evolution of thermoproteotal methanogens and their contributions to carbon cycling.

Kohtz, Anthony J. [Montana State Univ., Bozeman, M↗

Tricyclic GyrB/ParE (TriBE) Inhibitors. A new class of broad-spectrum dual-targeting antibacterial agents

Increasing resistance to every major class of antibiotics and a dearth of novel classes of antibacterial agents in development pipelines has created a dwindling reservoir of treatment options for serious bacterial infections. The bacterial type IIA topoisomerases, DNA gyrase and topoisomerase IV, are validated antibacterial drug targets with multiple prospective drug binding sites, including the catalytic site targeted by the fluoroquinolone antibiotics. Growing resistance to fluoroquinolones, frequently mediated by mutations in the drug-binding site, is increasingly limiting the utility of this antibiotic class, prompting the search for other inhibitor classes that target different sites on the topoisomerase complexes. The highly conserved ATP-binding subunits of DNA gyrase (GyrB) and topoisomerase IV (ParE) have long been recognized as excellent candidates for the development of dual-targeting antibacterial agents with broad-spectrum potential. However, to date, no natural product or small molecule inhibitors targeting these sites have succeeded in the clinic, and no inhibitors of these enzymes have yet been reported with broad-spectrum antibacterial activity encompassing the majority of Gram-negative pathogens. Using structure-based drug design (SBDD), we have created a novel dual-targeting pyrimidoindole inhibitor series with exquisite potency against GyrB and ParE enzymes from a broad range of clinically important pathogens. Inhibitors from this series demonstrate potent, broad-spectrum antibacterial activity against Gram-positive and Gram-negative pathogens of clinical importance, including fluoroquinolone resistant and multidrug resistant strains. Moreover, lead compounds have been discovered with clinical potential; they are well tolerated in animals, and efficacious in Gram-negative infection models.

59 BASIC BIOLOGICAL SCIENCES↗

Specification of Radionuclide Classes for MELCOR Molten Salt Reactor Simulations

MELCOR has been used extensively to facilitate virtual investigations into severe nuclear accidents for light-water reactors (LWRs). Non-light water reactors (non-LWRs) render some LWR-centric approaches potentially unsuitable. MELCOR has been instrumental in analyzing source terms for LWRs and has recently expanded its applicability to non-LWRs. To simplify radionuclide (RN) tracking, MELCOR currently groups elements into 17 classes, each containing representative species. This grouping, optimized for LWRs, is not appropriate for non-LWRs due to the different chemistry. This necessitates a reevaluation of radionuclide transport modeling. This report introduces a new class scheme for MELCOR tailored to MSR modeling, expanding the current 17 classes to 32 and are explained in the context of a UF 4 fueled FLiBe carrier MSR. It provides a discussion and justification for the new groupings and outlines a methodology for discovering and defining additional classes in MELCOR using a sample calculated RN inventory and a Gibbs energy minimizer (GEM).

22 GENERAL STUDIES OF NUCLEAR REACTORS↗

H α AS A LUMINOSITY CLASS DIAGNOSTIC FOR K- AND M-TYPE STARS

We have identified the H α absorption feature as a new spectroscopic diagnostic of luminosity class in K- and M-type stars. From high-resolution spectra of 19 stars with well-determined physical properties (including effective temperatures and stellar radii), we measured equivalent widths for H α and the Ca ii triplet and examined their dependence on both luminosity class and stellar radius. H α shows a strong relation with both luminosity class and radius that extends down to late M spectral types. This behavior in H α has been predicted as a result of the density-dependent overpopulation of the metastable 2s level in hydrogen, an effect that should become dominant for Balmer line formation in non-LTE conditions. We conclude that this new metallicity-insensitive diagnostic of luminosity class in cool stars could serve as an effective means of discerning between populations such as Milky Way giants and supergiant members of background galaxies.

79 ASTRONOMY AND ASTROPHYSICS↗

LINEAR POLARIZATION OF CLASS I METHANOL MASERS IN MASSIVE STAR-FORMING REGIONS

Class I methanol masers are found to be good tracers of the interaction between outflows from massive young stellar objects with their surrounding media. Although polarization observations of Class II methanol masers have been able to provide information about magnetic fields close to the central (proto)stars, polarization observations of Class I methanol masers are rare, especially at 44 and 95 GHz. We present the results of linear polarization observations of 39 Class I methanol maser sources at 44 and 95 GHz. These two lines are observed simultaneously with one of the 21 m Korean VLBI Network telescopes in single-dish mode. Approximately 60% of the observed sources have fractional polarizations of a few percent in at least one transition. This is the first reported detection of linear polarization of the 44 GHz methanol maser. The two maser transitions show similar polarization properties, indicating that they trace similar magnetic environments, although the fraction of the linear polarization is slightly higher at 95 GHz. We discuss the association between the directions of polarization angles and outflows. We also discuss some targets having different polarization properties at both lines, including DR21(OH) and G82.58+0.20, which show the 90° polarization angle flip at 44 GHz.

79 ASTRONOMY AND ASTROPHYSICS↗

Detection of 36 GHz Class I Methanol Maser Emission toward NGC 4945

We have searched for emission from the 36.2 GHz (4{sub −1}→3{sub 0}E) methanol transition toward NGC 4945, using the Australia Telescope Compact Array. 36.2 GHz methanol emission was detected offset southeast from the Galactic nucleus. The methanol emission is narrow, with a line width <10 km s{sup −1} and a luminosity five orders of magnitude higher than Galactic class I masers from the same transition. These characteristics combined the with physical separation from the strong central thermal emission suggests that the methanol emission is a maser. This emission is a factor of ∼90 more luminous than the widespread emission detected from the Milky Way central molecular zone. This is the fourth detection of extragalactic class I emission and the third detection of extragalactic 36.2 GHz maser emission. These extragalactic class I methanol masers do not appear to be simply highly luminous variants of Galactic class I emission and instead appear to trace large-scale regions of low-velocity shocks in molecular gas, which may precede, or be associated with, the early stages of large-scale star formation.

79 ASTRONOMY AND ASTROPHYSICS↗

Modeling techniques used in the communications link analysis and simulation system (CLASS)

CLASS (Communications Link Analysis and Simulation System) is a software package developed for NASA to predict the communication and tracking performance of the Tracking and Data Relay Satellite System (TDRSS) services. The modeling techniques used in CLASS are described. The components of TDRSS and the performance parameters to be computed by CLASS are too diverse to permit the use of a single technique to evaluate all performance measures. Hence, each CLASS module applies the modeling approach best suited for a particular subsystem and/or performance parameter in terms of model accuracy and computational speed.

Braun, W. R.↗

Validation of the communications link analysis and simulation system (CLASS)

CLASS (Communication Link Analysis and Simulation System) is a software package developed for NASA to predict the communication and tracking performance of the Tracking and Data Relay Satellite System (TDRSS) services. The methods used to verify CLASS are described. The usefulness of a software tool such as CLASS depends strongly on the reliability and accuracy of the results it produces. For this reason, considerable attention was paid to validation throughout the CLASS development.

Braun, W. R.↗

An information measure for class discrimination

This article describes a separability measure for class discrimination. This measure is based on the Fisher information measure for estimating the mixing proportion of two classes. The Fisher information measure not only provides a means to assess quantitatively the information content in the features for separating classes, but also gives the lower bound for the variance of any unbiased estimate of the mixing proportion based on observations of the features. Unlike most commonly used separability measures, this measure is not dependent on the form of the probability distribution of the features and does not imply a specific estimation procedure. This is important because the probability distribution function that describes the data for a given class does not have simple analytic forms, such as a Gaussian. Results of applying this measure to compare the information content provided by three Landsat-derived feature vectors for the purpose of separating small grains from other crops are presented.

Shen, S. S.↗

On a class of nonstationary stochastic processes

A new class of nonstationary stochastic processes is introduced and some of the essential properties of its members are investigated. This class is richer than the class of stationary processes and has the potential of modeling some nonstationary time series. The relation between these newly defined processes with other important classes of nonstationary processes is investigated. Several examples of linearly correlated processes which are not stationary, periodically correlated, or harmonizable are given.

Miamee, A. G.↗

Two classes of models for temporal variability of the Io torus

Two classes of spatially uniform models for the Io torus are analyzed for the stability and temporal variability of the torus. It is shown that stable-equilibrium torus models exist in two classes of models, one with nonlinear radial transport loss of plasma (e.g., from centrifugally driven interchanges) and one with linear transport (e.g., from externally driven interchanges). The two classes of models make substantially different predictions regarding temporal variability of the Io torus. Observational tests are proposed that make it possible to discriminate between the two classes.

Cheng, Andrew F.↗