Search NASASearch

SEARCH · Search NASA

Results for “directed evolution”

Search indexed NASA NTRS and DOE OSTI research on propulsion, heat transfer, battery materials and energy systems. Follow report and document links to the original sources.

Quote a phrase for an exact phrase match. Source license links do not imply unrestricted reuse.

At least 217 records · Page 12

High-fidelity dimer excitations using quantum hardware

The quantum simulation of entangled spin systems can play a central role in quantum magnetic materials discovery. Additionally, the simulation of spectroscopic signatures, such as the dynamical structure factor accessed in inelastic neutron scattering (INS), necessitates a long timescale for circuit evolution. This is because the energy resolution is directly related to the time over which the circuit could be meaningfully evolved. However, canonical Trotterization requires deep circuits precluding such long-time evolution—even for a small number of qubits. Here, in this study, we demonstrate “direct” resource efficient fast-forwarding (REFF) measurements with short-depth circuits that can be used to capture longer time dynamics of spin Hamiltonians. We showcase the results of the dynamics of a quantum spin dimer, the basic quantum unit of emergent many-body spin systems, whose density of states we simulate accurately. The long temporal evolution and measurement of the two-spin correlation functions enable the calculation of the dynamical structure factor S⁡(Q = 0, ω) measured in the neutron scattering cross-section. We exhibit the clarity of the triplet gap and the triplet splitting of the quantum dimer with class-leading fidelity that enables comparison to experimental neutron data. Our results on current circuit hardware outline an important workflow to predict and benchmark against the outputs of INS experiments of quantum magnets.

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC

The evolution of young stellar object disks and their environment

The main efforts were directed towards determining the frequency of disk occurrence and the timescales for disk evolution for solar-type and intermediate mass stars. The results of the investigation showed that optically thick disks are accretion disks. The projected accomplishments are also discussed.

Strom, Stephen E.

Resolving the phase of Fano resonance wave packets with photoelectron frequency-resolved optical gating

The creation of structured electronic wave packets (EWPs) energetically close to Fano resonances has been achieved with ultrafast extreme ultraviolet coherent light sources. However, direct real-time observations of EWP evolution and full reconstructions of the quantum properties of EWPs, including both amplitude and phase, are lacking. Here we introduce and demonstrate a comprehensive approach for the direct measurement and complete characterization of structured EWPs created within a prototypical Fano resonance. Because of its analogy with frequency-resolved optical gating (FROG), we named the method photoelectron FROG. The correlated EWP is initiated by a carefully engineered extreme UV pump pulse. A weak near-infrared laser field, serving as a probe pulse, samples the evolution of the EWPs in the time domain, as well as in the frequency domain. The amplitude and phase of the EWPs are obtained via a time-dependent reconstruction algorithm based on a short-time Fourier transformation. Given the excellent agreement between our experimental results and time-dependent reconstructions, we expect this method to be broadly applicable to the study of ultrafast processes, especially electronic ones, in complex systems, as well as the coherent control of such systems on their fundamental timescales.

quantum optics

Research on the noise produced by large scale structure in supersonic jets

Using a dual electrode glow discharge excitation device, a method of mode selection into either the n = 0 or n = + or - 1 azimuthal modes was developed and tested by Fourier analyzing experimental azimuthal phase and amplitude data. On a M = 2.1 moderate Reynolds number (Re = 68,000) jet with a laminar boundary layer, under n = 0 or n = +1 excitation, coherent axial wave evolution, mean flow, and sound pressure level directivity measurements were performed. The boundary layer of this same jet was excited usng a grit coating on the nozzle wall, and bandpassed axial wave evolution data obtained and compared to the masurements made by previous workers on a conventional high Reynolds number jet (Re = 5,000,000) using a hot-film type probe.

Mclaughlin, D. K.

A particle astrophysics magnet facility: ASTROMAG

The primary scientific objectives of ASTROMAG are to: examine cosmological models by searching for antimatter and dark matter candidates; study the origin and evolution of matter in the galaxy by direct sampling of galactic matter; and study the origin and acceleration of the relativistic particle plasma in the galaxy and its effects on the dynamics and evolution of the galaxy. These general scientific objectives will be met by ASTROMAG with particle detection instruments designed to make the following observations: search, for anti-nuclei of helium and heavier element; measure the spectra of anti-protons and positrons; measure the isotopic composition of cosmic ray nuclei at energies of several GeV/amu; and measure the energy spectra of cosmic ray nuclei to very high energies.

Ormes, Jonathan F.

The noise from supersonic elliptic jets

This paper presents calculations of the noise radiated by a supersonic elliptic jet. The large scale structures in the jet, that are the predominant source of noise in the downstream direction, are modeled as instability waves. The evolution of the instability waves is determined by a local, linear, inviscid analysis. An expression is derived for the acoustic field outside the jet and the far field directivity associated with each instability wave. Calculations are performed for a Mach 1.5 elliptic jet with aspect ratio 2:1 and a Mach 2.0 elliptic jet with aspect ratio 2:1 and a Mach 2.0 elliptic jet with aspect ratio 3:1. The mean flow development is taken from experimental results. Comparisons are made with far field acoustic measurements.

Morris, Philip J.

Effects of ion two-stream instability on auroral ion heating

The ion two-stream instability develops between upflowing H(+) and O(+) in the auroral acceleration region, if the two species are accelerated to different velocities in a semistationary electrostatic potential. Parallel propagating modes are unstable only for small relative drifts, while oblique modes remain unstable at larger drifts and, consequently, higher altitudes. The effects of oblique modes on ion heating are investigated, and it is found that O(+) heats primarily by trapping in the direction of wave propagation during the early, coherent phase of wave growth in the temporal evolution problem. After undergoing trapping along the magnetic field direction, H(+) heats primarily by quasi-linear diffusion when the spectrum broadens nonlinearly. The parallel ion distributions evolve by formation of a high-energy (low-energy) tail on oxygen (hydrogen) along with bulk slowing of hydrogen, which results in more energetic oxygen than hydrogen. Total heating is greatest in the direction of wave propagation, and this effect is greater for hydrogen than for oxygen.

Roth, I.

Kinetic simulations of the Kelvin-Helmholtz instability at the magnetopause

Two-dimensional hybrid simulations with particle ions and fluid electrons are used to calculate the kinetic evolution of the Kelvin-Helmholtz instability for a magnetopauselike configuration. The unidirectional magnetic field is essentially transverse to the plasma flow velocity, which is the most unstable case according to linear theory and models the flow dynamics in the subsolar region of the magnetopause for northward interplanetary magnetic field. We recover effects analogous to those found in MHD simulations, including a mode cascade to longer wavelengths. The boundary layer consists of coherent structure and is not well described by a diffusive process. Isolated structures on the order of the ion gyroradius are formed which can cross the boundary in either direction. We describe how the time evolution of these structures represents transport across boundary layers, and we consider the possible connection of these entities to flux transfer events and other structure seen in the low-latitude boundary layer at the Earth's magnetopause as well as to flux ropes commonly observed near the ionopause of Venus. We also discuss the relation of the hybrid calculations to previous MHD simulations and to observations.

Thomas, V. A.

Astromag - Particle astrophysics magnet facility for Space Station Freedom

The Astromag (for astrophysics magnet) superconducting magnet facility to be flown aboard the Space Station in the late 1990s is described together with its scientific objectives. The Astromag facility is basically a magnetic spectrometer capable of determining the momentum per unit charge and the sign of the charge of fully ionized cosmic rays. The Astromag's science goals include investigating the origin and the evolution of matter in the Galaxy by direct sampling of Galactic material, examining cosmological models by searching for antimatter and an evidence of dark matter, and studying the origin of extremely energetic particles and their effects on the dynamics and evolution of the Galaxy. The Astromag's instrumentation will include an array of particle detectors (the WIZard instrument), a large spectrometer (LISA), and a stack of passive high-resolution track detectors in the Astromag's magnetic field (the SCIN/MAGIC instrument).

Jones, W. Vernon

In vitro evolution of a ribozyme that contains 5-bromouridine

The Tetrahymena group I ribozyme was modified by replacing all 99 component uridine residues with 5-bromouridine. This resulted in a 13-fold reduction in catalytic efficiency in the RNA-catalyzed phosphoester-transfer reaction compared to the behavior of the unmodified ribozyme. A population of 10(13) variant ribozymes was constructed, each containing 5-bromouridine in place of uridine. Five successive 'generations' of in vitro evolution were carried out, selecting for improved phosphoester transferase activity. The evolved molecules exhibited a 27-fold increase in catalytic efficiency compared to the wild-type bromouridine-containing ribozyme, even exceeding that of the wild-type ribozyme in the non-brominated form. Three specific mutations were found to be responsible for this altered behavior. These mutations enhanced activity in the context of 5-bromouridine, but were detrimental in the context of unmodified uridine. The evolved RNAs not only tolerated but came to exploit the presence of the nucleotide analogue in carrying out their catalytic function.

NASA Discipline Exobiology

Solar cycle evolution of high-speed solar wind streams

Large amplitude high-speed solar wind streams and streams with maximum speeds in excess of 700 km/sec are far more common in years of declining and minimum solar activity than near solar maximum. Further, the broadest solar wind streams observed directly with space probes during the years 1962-1974 occurred near solar minimum in 1974. Changes in the frequency and nature of solar wind stream structures at the orbit of earth appear to be directly related to the long-term evolution of regions of low density in the solar corona.

Bame, S. J.

Auroral plasma transport processes in the presence of kV potential structures

We have simulated plasma transport processes in the presence of a quasi-two-dimensional current filament, that generated kV potential structure in the auroral region. The simulation consists of a set of one-dimensional flux tube simulations with different imposed time-dependent, field-aligned currents. The model uses the 16 moment system of equations and simultaneously solves coupled continuity and momentum equations and equations describing the transport along the magnetic field lines of parallel and perpendicular thermal energy and heat flows for each species. The lower end of the simulation is at an altitude of 800 km, in the collisional topside ionosphere, while the upper end is at 10 R(sub E) in the magnetosphere. The plasma consists of hot electrons and protons of magnetospheric origin and low-energy electrons, protons, and oxygen ions of ionospheric origin. The dynamical interaction of the individual current filaments with ionospheric and magnetospheric plasma generates a potential structure in the horizontal direction and kilovolt field-aligned potential drops along the field lines. The side-by-side display exhibits the evolution of the implied potential structure in the horizontial direction. In the presence of this potential structure and parallel electric field ionospheric plasma density is depleted and velocity is reduced, while density enhancement and increased velocity is observed in magnetospheric plasma. The ionospheric and magnetospheric electron temperatures increase below 2 R(sub E) due to magnetic mirror force on converging geomagnetic field lines. The primary cross-field motion produced by the horizontal E field (E x B drift) is perpendicular to both of the significant spatial directions and is thus ignorable in this geometry. The effects of other cross-field drift processes are discussed. The simulation thus provides insight into the dynamical evolution of two-dimensional potential structures driven by an imposed finite width, field-aligned current profile.

Ganguli, Supriya B.

Evolution and dynamics of shear-layer structures in near-wall turbulence

Near-wall flow structures in turbulent shear flows are analyzed, with particular emphasis on the study of their space-time evolution and connection to turbulence production. The results are obtained from investigation of a database generated from direct numerical simulation of turbulent channel flow at a Reynolds number of 180 based on half-channel width and friction velocity. New light is shed on problems associated with conditional sampling techniques, together with methods to improve these techniques, for use both in physical and numerical experiments. The results clearly indicate that earlier conceptual models of the processes associated with near-wall turbulence production, based on flow visualization and probe measurements need to be modified. For instance, the development of asymmetry in the spanwise direction seems to be an important element in the evolution of near-wall structures in general, and for shear layers in particular. The inhibition of spanwise motion of the near-wall streaky pattern may be the primary reason for the ability of small longitudinal riblets to reduce turbulent skin friction below the value for a flat surface.

Johansson, Arne V.

Crossing the Oxo‐Peroxo Wall for Selective Electrochemical Epoxidation

Electrochemical oxidation in water requires the formation of reactive oxygen species to be able to oxidize unsaturated hydrocarbons to epoxides, aldehydes, and ketones. These reactions, broadly classified as alternative oxidation reactions (AOR), directly compete with the prevalent oxygen evolution reaction (OER). In molecular catalysis, the Oxo-Wall dictates a transition from a stable oxo intermediate (OER active) to a meta-stable metal-oxo (OER inactive) generally occurs. In this work on heterogeneous catalysis, the same Oxo-Wall applies, however, a meta-stable oxo preferentially coordinates with lattice oxygen to form a more stable surface peroxo intermediate. A universal free energy onset of this process is identified at 3.39 eV under electrochemical activation in water and show that it is completely decoupled from the OER oxo species. Such decoupling gives rise to a new region of oxygen reactivity relevant for AOR where a selective oxidation of the unsaturated C-C bonds is predicted to occur instead of OER. A distinct AOR overpotential volcano is constructed and identify recently reported electrocatalysts, including palladium-platinum for propylene epoxidation and silver-nickel for ethylene epoxidation, along with others such as TiO 2 and CuO. Broader implications and limitations of electrochemical AOR are discussed, highlighting their potential to enable electrochemically enhanced thermal catalysis.

Electrocatalysis

An isotopic labeling investigation into the influence of the nitro group on LLM-105 thermal decomposition

Here, this work presents the first application of isotopically labeled LLM-105 (2,6-diamino-3,5-dinitropyrazine-1-oxide) to investigate thermal decomposition pathways. Specially synthesized LLM-105 isotopologues were utilized to isolate the influence of labeled 15 NO 2 nitro groups on the formation of lightgas products. Simultaneous differential scanning calorimetry, thermo-gravimetric, and mass spectrometry measurements were employed to track the evolution of product gases, enabling the direct comparison of isotopically shifted species with unlabeled LLM-105. Key findings show that C 2 N 2 production is mainly dependent on nitrogen sources from either the amine groups or the pyrazine ring (i.e., not the nitro groups). The formation of NO, N 2 , and N 2 O all involves the nitro groups to some extent. NO (nitric oxide) was found to be the predominant gas species directly formed from the nitro group of LLM-105. In contrast, mixed nitrogen isotopologues of N 2 and N 2 O (i.e., 14 N 15 N and 15 NNO) formed more readily in comparison to their pure counterparts (i.e., 15 N 2 and 15 N 2 O). This indicates the amine and/or pyrazine groups of LLM-105, in addition to the nitro group, are involved in the decomposition pathways forming N 2 and N 2 O. In addition, our investigation led to the discovery of two previously unreported decomposition products (CHO and HNCO), which were confirmed through hydrogen labelling utilizing deuterium isotopes. These results provide detailed speciation trends of gaseous products during LLM-105 decomposition, offering new insights into reaction pathways. Experimental data reported here will support the development of a detailed chemical kinetics model for LLM-105, essential for the safe handling of high explosives.

Chemistry - Chemical explosives

Anomalously slow hot carrier cooling and insulator-to-metal transition in a photo-doped Mott insulator

Photo-doped Mott insulators can exhibit novel photocarrier transport and relaxation dynamics and non-equilibrium phases. However, time-resolved real-space imaging of these processes are still lacking. Here, we use scanning ultrafast electron microscopy (SUEM) to directly visualize the spatial-temporal evolution of photoexcited species in a spin-orbit assisted Mott insulator α-RuCl 3 . At low optical fluences, we observe extremely long hot photocarrier transport time over one nanosecond, almost an order of magnitude longer than any known values in conventional semiconductors. At higher optical fluences, we observe nonlinear features suggesting a photo-induced insulator-to-metal transition, which is unusual in a large-gap Mott insulator. Our results demonstrate the rich physics in a photo-doped Mott insulator that can be extracted from spatial-temporal imaging and showcase the capability of SUEM to sensitively probe photoexcitations in strongly correlated electron systems.

42 ENGINEERING

Simulation of electron Bernstein waves using FullWave with a 2D non-local hot plasma model

Hot plasma wave simulation capability is expanded in the FullWave code by updating the hybrid iterative solver in the code with a semi-implicit time stepping method. The new approach is used to simulate Electron Bernstein Wave (EBW) heating in over-dense spherical tokamak plasmas. The code’s hybrid iterative solver circumvents the prohibitive memory cost of direct methods by combining a time evolution of Maxwell’s equations with frequency-domain relaxation, while the conductivity kernel, calculated via 3D particle tracking, captures the essential non-local wave–particle interactions. One-dimensional EBW simulations verify the algorithm’s accuracy by demonstrating mode conversion from X-mode wave to EBW at the upper hybrid resonance and a strong cyclotron damping near the plasma core. Two-dimensional simulation reproduces the predicted short EBW wavelength and quantitatively matches the hot-plasma dispersion relation. This study demonstrates the fidelity of the hybrid solver for the electron cyclotron frequency range.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY

Reconfigurable modular computer networks for spacecraft on-board processing

The core electronics subsystems on unmanned spacecraft, which have been sent over the last 20 years to investigate the moon, Mars, Venus, and Mercury, have progressed through an evolution from simple fixed controllers and analog computers in the 1960's to general-purpose digital computers in current designs. This evolution is now moving in the direction of distributed computer networks. Current Voyager spacecraft already use three on-board computers. One is used to store commands and provide overall spacecraft management. Another is used for instrument control and telemetry collection, and the third computer is used for attitude control and scientific instrument pointing. An examination of the control logic in the instruments shows that, for many, it is cost-effective to replace the sequencing logic with a microcomputer. The Unified Data System architecture considered consists of a set of standard microcomputers connected by several redundant buses. A typical self-checking computer module will contain 23 RAMs, two microprocessors, one memory interface, three bus interfaces, and one core building block.

Rennels, D. A.