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At least 217 records · Page 12

Phenotyping stomatal closure by thermal imaging for GWAS and TWAS of water use efficiency-related genes

Abstract Stomata allow CO2 uptake by leaves for photosynthetic assimilation at the cost of water vapor loss to the atmosphere. The opening and closing of stomata in response to fluctuations in light intensity regulate CO2 and water fluxes and are essential for maintaining water-use efficiency (WUE). However, a little is known about the genetic basis for natural variation in stomatal movement, especially in C4 crops. This is partly because the stomatal response to a change in light intensity is difficult to measure at the scale required for association studies. Here, we used high-throughput thermal imaging to bypass the phenotyping bottleneck and assess 10 traits describing stomatal conductance (gs) before, during and after a stepwise decrease in light intensity for a diversity panel of 659 sorghum (Sorghum bicolor) accessions. Results from thermal imaging significantly correlated with photosynthetic gas exchange measurements. gs traits varied substantially across the population and were moderately heritable (h2 up to 0.72). An integrated genome-wide and transcriptome-wide association study identified candidate genes putatively driving variation in stomatal conductance traits. Of the 239 unique candidate genes identified with the greatest confidence, 77 were putative orthologs of Arabidopsis (Arabidopsis thaliana) genes related to functions implicated in WUE, including stomatal opening/closing (24 genes), stomatal/epidermal cell development (35 genes), leaf/vasculature development (12 genes), or chlorophyll metabolism/photosynthesis (8 genes). These findings demonstrate an approach to finding genotype-to-phenotype relationships for a challenging trait as well as candidate genes for further investigation of the genetic basis of WUE in a model C4 grass for bioenergy, food, and forage production.

54 ENVIRONMENTAL SCIENCES↗

A Sun-to-Earth Analysis of Magnetic Helicity of the 2013 March 17-18 Interplanetary Coronal Mass Ejection

We compare the magnetic helicity in the 2013 March 17-18 interplanetary coronal mass ejection (ICME) flux rope at 1 au and in its solar counterpart. The progenitor coronal mass ejection (CME) erupted on 2013 March 15 from NOAA active region 11692 and is associated with an M1.1 flare. We derive the source region reconnection flux using the post-eruption arcade (PEA) method that uses the photospheric magnetogram and the area under the PEA. The geometrical properties of the near-Sun flux rope is obtained by forward-modeling of white-light CME observations. Combining the geometrical properties and the reconnection flux, we extract the magnetic properties of the CME flux rope. We derive the magnetic helicity of the flux rope using its magnetic and geometric properties obtained near the Sun and at 1 au. We use a constant-α force-free cylindrical flux rope model fit to the in situ observations in order to derive the magnetic and geometric information of the 1 au ICME. We find a good correspondence in both amplitude and sign of the helicity between the ICME and the CME, assuming a semicircular (half torus) ICME flux rope with a length of π au. We find that about 83% of the total flux rope helicity at 1 au is injected by the magnetic reconnection in the low corona. We discuss the effect of assuming flux rope length in the derived value of the magnetic helicity. This study connecting the helicity of magnetic flux ropes through the Sun-Earth system has important implications for the origin of helicity in the interplanetary medium and the topology of ICME flux ropes at 1 au and hence their space weather consequences.

Pal, Sanchita↗

Multiwavelength Observations of the Blazar VER J0521+211 during an Elevated TeV Gamma-Ray State

We report on a long-lasting, elevated gamma-ray flux state from VER J0521+211 observed by VERITAS, MAGIC, and Fermi-LAT in 2013 and 2014. The peak integral flux above 200 GeV measured with the nightly binned light curve is (8.8 ± 0.4) × 10 –7 photons m –2 s –1 , or ~37% of the Crab Nebula flux. Multiwavelength observations from X-ray, UV, and optical instruments are also presented. A moderate correlation between the X-ray and TeV gamma-ray fluxes was observed, and the X-ray spectrum appeared harder when the flux was higher. Using the gamma-ray spectrum and four models of the extragalactic background light (EBL), a conservative 95% confidence upper limit on the redshift of the source was found to be z ≤ 0.31. Unlike the gamma-ray and X-ray bands, the optical flux did not increase significantly during the studied period compared to the archival low-state flux. The spectral variability from optical to X-ray bands suggests that the synchrotron peak of the spectral energy distribution (SED) may become broader during flaring states, which can be adequately described with a one-zone synchrotron self-Compton model varying the high-energy end of the underlying particle spectrum. The synchrotron peak frequency of the SED and the radio morphology of the jet from the MOJAVE program are consistent with the source being an intermediate-frequency-peaked BL Lac object.

79 ASTRONOMY AND ASTROPHYSICS↗

The dusty envelopes of FU Orionis variables

The spectral energy distributions of five FU Orionis variables are discussed using new ground-based infrared photometry and IRAS Addscan measurements. V1057 Cyg, V1515 Cyg, and Z CMa have much larger far-infrared fluxes than can be explained by the simple accretion disk models that match their spectral energy distributions less than 10 microns. The 10-20-micron excess emission in V1057 has decreased proportionately with the decline in optical light, which demonstrates that the far-infrared flux arises in a dust shell reprocessing light from the central object. It is suggested that the far-infrared excesses arise in somewhat flattened dusty envelopes with a covering factor in a solid angle of roughly one-half, which is consistent with the fraction of FU Orionis variables that are heavily embedded. It is proposed that the dusty envelope falls onto the outer disk at a rate of about 5 x 10 exp -6 solar mass/yr. The rate is sufficient to replenish disk material accreted during a FU Orionis outburst and allow repetitive eruptions on time scales of several thousand years.

Kenyon, Scott J.↗

The Solar Clock

The Sun is powered by a very stable source of fusion energy in its core that radiates that energy outward in a constant flow. Yet it has a cycle of magnetic dynamo activity whose strength and duration are variable. This variability, which affects the Earth's ‘space climate', points to temporal changes in the convective and diffusive transport of magnetic flux above the tachocline, where the flux is generated. The longest record we have of this variability is the time series of Sunspot Numbers (SSN). This record suggests that the interior of the Sun follows a clocklike magnetic flux production cycle with a length of close to 11.05 yr. The variations in sunspot cycle duration, as well as the sunspot number rise and fall times, their hemispheric asymmetries, and the maximum sunspot numbers of the individual cycles, are likely produced in the process of the magnetic flux transport. Helioseismology continues to shed more light on the convection zone variabilities, including the ‘torsional oscillations' that seem to have a special connection to the emerging strong magnetic fluxes that produce the sunspots. These new observations may eventually lead to an explanation for the surprisingly good correlation between the rate of sunspot appearance and the maximum sunspot number, and to a better understanding of the relationship between the solar dynamo and the sunspot number cycle. Better understanding of the polar regions awaits long-term monitoring with a polar solar mission. Better predictions of nearterm space weather could be obtained from a permanent L5 monitor.

C T Russell↗

The Dark Energy Survey Supernova Program: slow supernovae show cosmological time dilation out to z ~ 1.

ABSTRACT We present a precise measurement of cosmological time dilation using the light curves of 1504 Type Ia supernovae from the Dark Energy Survey spanning a redshift range $0.1\lesssim z\lesssim 1.2$. We find that the width of supernova light curves is proportional to $(1+z)$, as expected for time dilation due to the expansion of the Universe. Assuming Type Ia supernovae light curves are emitted with a consistent duration $\Delta t_{\rm em}$, and parametrizing the observed duration as $\Delta t_{\rm obs}=\Delta t_{\rm em}(1+z)^b$, we fit for the form of time dilation using two methods. First, we find that a power of $b \approx 1$ minimizes the flux scatter in stacked subsamples of light curves across different redshifts. Secondly, we fit each target supernova to a stacked light curve (stacking all supernovae with observed bandpasses matching that of the target light curve) and find $b=1.003\pm 0.005$ (stat) $\pm \, 0.010$ (sys). Thanks to the large number of supernovae and large redshift-range of the sample, this analysis gives the most precise measurement of cosmological time dilation to date, ruling out any non-time-dilating cosmological models at very high significance.

79 ASTRONOMY AND ASTROPHYSICS↗

Discussion of Yellow Starthistle Response to Photosynthetic Irradiance, Photoperiod, and CO2

Yellow Starthistle (Centaurea solstitialis) is a native annual weed of Eurasia and since introduction into the United STates has become an invasive and noxious weed. It grows in a rosette habit during the vegetative state and usually bolts in summer to produce a large and branched flowering stem. Time to flowering in Yellow Starthistle has been attributed to photoperiod, nitrogen nutrition, temperature, and water stress. We executed a series of studies to investigate the role of light, both photoperiod and photosynthetic photon flux, on flowering and development in Yellow Starthistle. Treatments were presented in 4 ways: 1) varying day length with constant photosynthetic photon flus (PPF) providing increasing daily integrated Photosynthetic Photon (PP) exposure with longer day lengths 2) varying day length while adjusting PPF to maintain daily PP exposure for all treatments 3) extending photoperiod treatments beyond common 12-h photosynthetic period with low light levels to maintain both PPF and daily PP across all treatments4)reciprocal exchange of plant among photoperiod treatments Yellow Starthistle appears to be a long-day plant with a critical day length requirement between 14-h and 16-h to induce transition from vegetative to floral stages in development. PPF and daily absorbed photons did not affect time to vegetative floral stage transition, but did affect factors such as biomass accumulation and canopy parameters such as specific leaf mass. Reciprocal exchange of plants between floral inducing and inhibiting photoperiod treatments, starting at 2-weeks post germination, had no effect on to flower. Flowering was determined by photoperiod experienced during the first 2-weeks (or less) post germination.Yellow Starthistle net photosynthetic response to elevated atmospheric CO2 concentrations over a range of photosynthetically active radiation flux rates and temperatures will also be presented and discussed.

Photosynthetic↗

Discussion of Yellow Starthistle Response to Irradiance, Photoperiod, and CO2

Yellow Starthistle (Centaurea solstitialis) is a native annual weed of Eurasia and since introduction into the US has become an invasive and noxious weed. It grows in a rosette habit during the vegetative state and usually bolts in summer to produce a large and branched flowering stem. Time to flowering in Yellow Starthistle has been attributed to photoperiod, nitrogen nutrition, temperature, and water stress. We executed a series of studies to investigate the role of light, both photoperiod and photosynthetic photon flux, on flowering and development in Yellow Starthistle. Treatments were presented in 4 ways: (1) Varying day length with constant photosynthetic photon flus (PPF) - providing increasing daily integrated Photosynthetic Photon (PP) exposure with longer day lengths, (2) Varying day length while adjusting PPF to maintain daily PP exposure for all treatments, (3) Extending photoperiod treatments beyond common 12-h photosynthetic period with low light levels to maintain both PPF and daily PP across all treatments; and (4) Reciprocal exchange of plant among photoperiod treatments. Yellow Starthistle appears to be a long-day plant with a critical day length requirement between 14-h and 16-h to induce transition from vegetative to floral stages in development. PPF and daily absorbed photons did not affect time to vegetative / floral stage transition, but did affect factors such as biomass accumulation and canopy parameters such as specific leaf mass. Reciprocal exchange of plants between floral inducing and inhibiting photoperiod treatments, starting at 2-weeks post germination, had no effect on to flower. Flowering was determined by photoperiod experienced during the first 2-weeks (or less) post germination. Yellow Starthistle net photosynthetic response to elevated atmospheric CO2 concentrations over a range of photosynthetically active radiation flux rates and temperatures will also be presented and discussed.

Photons↗

Catalytic resonance theory for the kinetic signatures of multiple wavelength photocatalysis

Multi-step surface chemistry promoted with one or two wavelengths of light exhibited distinct kinetic signatures indicative of the light-adsorbate interactions and the number of photon-sensitive elementary steps. In this work, kinetic Monte Carlo simulations identified the kinetic response of general surface mechanisms to variation in the per-site photon flux of one or two wavelengths of incident light. Photocatalytic rates were described via a non-dimensional photon flux, identifying multiple kinetic regimes with unique degrees of rate control. Under photon-controlled kinetic conditions, maximum quantum yield and turnover frequency were obtained under constant illumination, while pulsing of one or more light sources was shown to exhibit slower rates and less efficient photocatalytic promotion due to the inherent dynamic nature of light, which comprises a stream of photons. Simulations provided distinct kinetic signatures in catalytic rates and Arrhenius kinetics for specific light-surface-adsorbate interactions corresponding to photocatalytic promotion of specific steps in surface chemistry.

catalytic resonance↗

Lighting Condition Analysis for Mars Moon Phobos

A manned mission to Phobos may be an important precursor and catalyst for the human exploration of Mars, as it will fully demonstrate the technologies for a successful Mars mission. A comprehensive understanding of Phobos' environment such as lighting condition and gravitational acceleration are essential to the mission success. The lighting condition is one of many critical factors for landing zone selection, vehicle power subsystem design, and surface mobility vehicle path planning. Due to the orbital characteristic of Phobos, the lighting condition will change dramatically from one Martian season to another. This study uses high fidelity computer simulation to investigate the lighting conditions, specifically the solar radiation flux over the surface, on Phobos. Ephemeris data from the Jet Propulsion Laboratory (JPL) DE405 model was used to model the state of the Sun, the Earth, and Mars. An occultation model was developed to simulate Phobos' self-shadowing and its solar eclipses by Mars. The propagated Phobos' state was compared with data from JPL's Horizon system to ensure the accuracy of the result. Results for Phobos lighting condition over one Martian year are presented in this paper, which include length of solar eclipse, average solar radiation intensity, surface exposure time, total maximum solar energy, and total surface solar energy (constrained by incident angle). The results show that Phobos' solar eclipse time changes throughout the Martian year with the maximum eclipse time occurring during the Martian spring and fall equinox and no solar eclipse during the Martian summer and winter solstice. Solar radiation intensity is close to minimum at the summer solstice and close to maximum at the winter solstice. Total surface exposure time is longer near the north pole and around the anti- Mars point. Total maximum solar energy is larger around the anti-Mars point. Total surface solar energy is higher around the anti-Mars point near the equator. The results from this study and others like it will be important in determining landing site selection, vehicle system design and mission operations for the human exploration of Phobos and subsequently Mars.

Li, Zu Qun↗

Lighting Condition Analysis for Mars' Moon Phobos

This study used high fidelity computer simulation to investigate the lighting conditions, specifically the solar radiation flux over the surface, on Phobos. Ephemeris data from the Jet Propulsion Laboratory (JPL) DE405 model was used to model the state of the Sun, Earth, Moon, and Mars. An occultation model was developed to simulate Phobos' self-shadowing and its solar eclipses by Mars. The propagated Phobos state was compared with data from JPL's Horizon system to ensure the accuracy of the result. Results for Phobos lighting conditions over one Martian year are presented, which include the duration of solar eclipses, average solar radiation intensity, surface exposure time, available energy per unit area for sun tracking arrays, and available energy per unit area for fixed arrays (constrained by incident angle). The results show that: Phobos' solar eclipse time varies throughout the Martian year, with longer eclipse durations during the Martian spring and fall seasons and no eclipses during the Martian summer and winter seasons; solar radiation intensity is close to minimum at the summer solstice and close to maximum at the winter solstice; exposure time per orbit is relatively constant over the surface during the spring and fall but varies with latitude during the summer and winter; and Sun tracking solar arrays generate more energy than a fixed solar array. A usage example of the result is also present in this paper to demonstrate the utility.

Li, Zu Qun↗

Lighting Condition Analysis for Mars' Moon Phobos

This study used high fidelity computer simulation to investigate the lighting conditions, specifically the solar radiation flux over the surface, on Phobos. Ephemeris data from the Jet Propulsion Laboratory (JPL) DE405 model was used to model the state of the Sun, Earth, Moon, and Mars. An occultation model was developed to simulate Phobos' self-shadowing and its solar eclipses by Mars. The propagated Phobos state was compared with data from JPL's Horizon system to ensure the accuracy of the result. Results for Phobos lighting conditions over one Martian year are presented, which include the duration of solar eclipses, average solar radiation intensity, surface exposure time, and radiant exposure for both sun tracking and fixed solar arrays. The results show that: Phobos' solar eclipse time varies throughout the Martian year, with longer eclipse durations during the Martian northern spring and fall seasons and no eclipses during the Martian northern summer and winter seasons; solar radiation intensity is close to minimum in late spring and close to maximum in late fall; exposure time per orbit is relatively constant over the surface during the spring and fall but varies with latitude during the summer and winter; and Sun tracking solar arrays generate more energy than a fixed solar array. A usage example of the result is also present in this paper to demonstrate the utility.

Li, Zu Qun↗

Instrumental effects on the temperature and density derived from the light ion mass spectrometer

An expression for the flux into a retarding potential analyzer (RPA) is derived which takes into account the instrumental effect of a dependence on energy of the solid angle of the acceptance cone. A second instrumental effect of a limited bandpass is briefly discussed. Using the (LIMS) instrument on SCATHA, it is shown that temperatures and densities derived without considering the effect of the solid angle dependence on energy will be too low, dramatically so for E(t) E(1), where E(1) is the e folding distance of the solid angle dependence and E(t) is the thermal energy of the plasma. For E(t) E(1), there is effectively no impact on the derived temperatures and densities if the solid angle effect is ignored.

Craven, P. D.↗

Modeling a Coronal Mass Ejection from an Extended Filament Channel. I. Eruption and Early Evolution

We present observations and modeling of the magnetic field configuration, morphology, and dynamics of a large-scale, high-latitude filament eruption observed by the Solar Dynamics Observatory. We analyze the 2015 July 9–10 filament eruption and the evolution of the resulting coronal mass ejection (CME) through the solar corona. The slow streamer-blowout CME leaves behind an elongated post-eruption arcade above the extended polarity inversion line that is only poorly visible in extreme ultraviolet (EUV) disk observations and does not resemble a typical bright flare-loop system. Magnetohydrodynamic (MHD) simulation results from our data-inspired modeling of this eruption compare favorably with the EUV and white-light coronagraph observations. We estimate the reconnection flux from the simulation’s flare-arcade growth and examine the magnetic-field orientation and evolution of the erupting prominence, highlighting the transition from an erupting sheared-arcade filament channel into a streamer-blowout flux-rope CME. Our results represent the first numerical modeling of a global-scale filament eruption where multiple ambiguous and complex observational signatures in EUV and white light can be fully understood and explained with the MHD simulation. In this context, our findings also suggest that the so-called “stealth CME” classification, as a driver of unexpected or “problem” geomagnetic storms, belongs more to a continuum of observable/non-observable signatures than to separate or distinct eruption processes.

Benjamin J Lynch↗

Results from monitoring the broad-line radio galaxy 3C 390.3

The broad line radio galaxy 3C 390.3 was observed in a multiwavelength monitoring campaign by the Rosat high resolution imager (HRI), the International Ultraviolet Explorer and ground-based optical, infrared and and radio observations. The preliminary results from the campaign are reported, with emphasis on the X-ray observations. A large amplitude variability is observed. The light curve is dominated by a flare near JD 2449800, characterized by a doubling time scale of 9 days and a general increase in flux after the flare. The optical R and I band light curves show a general increase in flux. Spectra from the Advanced Satellite for Cosmology and Astrophysics (ASCA) obtained before and after the flare can be described by an absorbed power law.

Leighly, K, M.↗

Interplanetary cosmic dust flux

Pioneer 8 and 9 measured cosmic dust flux rate data are in agreement with astronomy theory, zodiacal light measurements, and ground-based observations, but differ markedly from the high flux rates deduced from earlier in situ measurements. As many as seven orders-of-magnitude separate the small particle end of the high and low flux curves. It was concluded that the data from the multicoincidence cosmic dust sensors have not only measured very low flux for micrometeorites, which is in keeping with astronomy theory, but have also shown how a high flux theory may be based on faulty data.

Berg, O. E.↗

The Importance of Protein Phosphorylation for Signaling and Metabolism in Response to Diel Light Cycling and Nutrient Availability in a Marine Diatom

Diatoms are major contributors to global primary production and their populations in the modern oceans are affected by availability of iron, nitrogen, phosphate, silica, and other trace metals, vitamins, and infochemicals. However, little is known about the role of phosphorylation in diatoms and its role in regulation and signaling. We report a total of 2759 phosphorylation sites on 1502 proteins detected in Phaeodactylum tricornutum. Conditionally phosphorylated peptides were detected at low iron (n = 108), during the diel cycle (n = 149), and due to nitrogen availability (n = 137). Through a multi-omic comparison of transcript, protein, phosphorylation, and protein homology, we identify numerous proteins and key cellular processes that are likely under control of phospho-regulation. We show that phosphorylation regulates: (1) carbon retrenchment and reallocation during growth under low iron, (2) carbon flux towards lipid biosynthesis after the lights turn on, (3) coordination of transcription and translation over the diel cycle and (4) in response to nitrogen depletion. We also uncover phosphorylation sites for proteins that play major roles in diatom Fe sensing and utilization, including flavodoxin and phytotransferrin (ISIP2A), as well as identify phospho-regulated stress proteins and kinases. These findings provide much needed insight into the roles of protein phosphorylation in diel cycling and nutrient sensing in diatoms.

59 BASIC BIOLOGICAL SCIENCES↗

Short-term FUV flux variability and phase-dependent winds in Be stars

FUV (Far Ultraviolet) light curves and the behavior of the C IV wind line versus phase are discussed for four Be stars. The IUE (International Ultraviolet Explorer) data acquired during three multiwavelength campaigns aimed at determining the cause for short term optical light variability in Be stars and whether it is linked with the mass loss mechanism is presented. The observations confirm that it is a modulation in the star's photospheric temperature that causes the flux variability. A phase dependent variation is seen in the equivalent width and profile in the C IV wind line. The wind absorption tends to be strongest at maximum light and in a Be shell star the absolute flux of its C IV emission component appears to be anticorrelated with the absorption strength and the level of the FUV flux. The observations suggest that nonradial pulsations are responsible for the photometric variability and the generic model of a star pulsating in a sectorial mode.

Peters, G. J.↗