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At least 217 records · Page 12

Marine Renewable Energy Applications for Restorative Ocean Farming: Kelp

Kelp farming and kelp forest restoration have both been proposed as a solution to locally decrease the impacts of ocean acidification and eutrophication, often with co-benefits to other forms of aquaculture and mariculture. Compared to global markets, the kelp industry in the United States is still in its early phases, with the first commercial kelp farm founded in Casco Bay, Maine in 2010. Since then, interest and effort in kelp production has been increasing, with farms now present in Maine, New Hampshire, Connecticut, Rhode Island, Massachusetts, New York, Washington, and Alaska. Many research projects are underway in the United States to explore benefits of 3D ocean farming, tackle logistical problems of working in the ocean, autonomous farming, and explore viable end uses for kelp products. In seaweed farming, to remove the stored carbon or excess nutrients from the system, the biomass needs to be harvested at the optimal time to avoid the release of CO 2 that comes with decomposition. Timing of the harvest is also important for maximum crop yield, which can vary based on the final product. Additional monitoring needs can include a variety of water quality metrics, growth measurements, and visuals to ensure the health of the farm, comply with permits, support operations and maintenance functions. The variables measured may vary by desired end use of the product, location of farm, and operational design. Monitoring all of these parameters requires specialized devices that can be costly and challenging to maintain. Monitoring devices often face power and logistical constraints that could prevent kelp farmers from adopting these technologies or receiving accurate, efficient monitoring to assess ecosystem benefits and valuation. Marine energy has been identified as a possible power source for these devices. This project investigates the power needs for conducting kelp farm environmental monitoring compared with the available marine energy resource to evaluate if locally generated ocean energy could provide a solution to these monitoring challenges and benefit kelp farmers. This process was structured as follows: 1. Define what data is needed for farmers and their communities through desk research and interviews with end users. 2. Identify sensors and power requirements currently in use or available for commercial purchase. 3. Analyze current kelp and other mariculture farm locations for the potential marine energy resource. 4. Analyze farm designs and associated structures to make recommendations for marine energy design. 5. Quantify value that investment in sensors could provide in terms of carbon credit possibilities.

09 BIOMASS FUELS↗

The transition from resistance to acceptance: Managing a marine invasive species in a changing world

Abstract Marine invasive species can transform coastal ecosystems, yet mitigating their effects can be difficult, and even impractical. Often, marine invasive species are managed at poorly matched spatial scales, and at the same time, rates of spread and establishment are increasing under climate change and can outpace resources available for population suppression. These circumstances challenge traditional conservation goals of maintaining a historic environmental state, especially for a species like the European green crab ( Carcinus maenas ), a formidable invader with few examples of successful long‐term removal programs. A management paradigm where decision alternatives include resisting or accepting a new ecological trajectory may be needed. We apply mathematical concepts from decision theory to develop a quantitative framework for navigating management decisions in this new resist‐accept paradigm. We develop a model of European green crab growth, removal and colonization, and we find optimal levels of removal effort that minimize both ecological change and removal cost. We establish a benchmark of colonization pressure at which green crab density becomes decoupled from a decision maker's actions, such that population control can no longer shape the invasion trajectory. For informing the decision boundary between resistance and acceptance, our results highlight that a decision maker's understanding of how removal cost scales with removal effort is more important than understanding the density‐impact relationship. We show that assuming stationary system dynamics can result in sub‐optimal levels of species removal effort, highlighting the importance of developing anticipatory management strategies by accounting for non‐stationary dynamics. Policy implications . For marine invasive species that can disperse across long distances and recolonize rapidly after removal, the focus of conservation policy should shift away from understanding how to resist change to understanding when to stop resisting change. Navigating this decision problem involves trade‐offs among competing objectives, highlighting the need for structured approaches to elicit objective weights that reflect the values of the decision maker. For natural resource managers facing possible ecosystem transformation, this decision framework can enable proactive and strategic decisions made under uncertainty in a changing world.

Keller, Abigail G. [Department of Environment Scie↗

Data from a four-day long microcosm experiment addressing the destabilization of artificial mineral-associated organic matter by model root exudates embedded in a soil matrix from the Rocky Mountain Biological Laboratory (Gothic, CO, USA), 2019

This dataset provides data collected during a four-day long laboratory soil microcosm experiment testing the efficacy of root exudate-driven mineral-associated organic matter destabilization. This dataset contains four data files in comma-separate values (*.csv). The files provide the metadata and the experimental results on microbial respiration, MAOM-derived respiration, and sequential mineral-extractions. This data was used to produce the figures in Bölscher et al., 2026. The results of the experiment can be found in the open access article Bölscher et al., 2026 (https://doi.org/10.1016/j.soilbio.2026.110276). Abstract: Mineral-associated organic matter (MAOM) is often considered stable, but root exudates can destabilize MAOM via various pathways. Theory and model system studies suggest that direct MAOM destabilization by strong ligands, like oxalic acid, or reducing agents, like catechol, is more effective than indirect, microbial-mediated MAOM destabilization, stimulated by less reactive compounds like glucose. Here, we demonstrate that the presence of a soil matrix alters the efficacy of exudate-driven MAOM destabilization pathways. Glucose and catechol destabilized significantly greater amounts of MAOM from ferrihydrite and aluminum hydroxide (Al (OH)3) embedded in a soil matrix than oxalic acid. Our findings indicate that indirect, microbial-mediated MAOM destabilization may play a larger role than direct MAOM destabilization in soil environments.

Destabilization↗

2024 OES-Environmental 2024 State of the Science Report, Chapter 3: Marine Renewable Energy: Stressor-Receptor Interactions

Determining the potential effects of marine renewable energy (MRE) development on the ocean requires consideration of how each component of a tidal, wave, riverine, or other MRE system might affect marine animals, habitats that support marine communities, or processes that make up essential oceanographic and ecological systems. Researchers around the world have been assessing the potential effects of MRE deployments and operations using a variety of instruments, models, analytical methods, and approaches. The most common approach, and the one followed throughout this report, is the framework of stressor-receptor interactions (Boehlert & Gill 2010), where stressors are the components of an MRE device and associated system that may cause stress, injury, or death to a marine animal, habitat, or ecosystem. The receptors are the species, their habitats, and the oceanographic and ecological processes that support them.

16 TIDAL AND WAVE POWER↗

2024 OES-Environmental 2024 State of the Science Report, Chapter 9: Beyond Single Marine Renewable Energy Devices: A System-wide Effects Approach

Global expansion of renewable energy, including marine renewable energy (MRE) technology development is necessary to mitigate the effects of climate change, facilitate a sustainable transition from carbon-based energy sources, and satisfy national energy security needs using locally produced electricity (European Commission 2022; IPCC 2023; IRENA 2020). As MRE engineering and research continue to focus on designing devices for deployment in nearshore and offshore waters around the world, researchers are also examining potential environmental effects on marine animals, habitats, and ecosystem processes. To date, the focus has been on interactions between small numbers of MRE devices (1-6) and the environment, such as collisions between animals and turbine blades, the effects of underwater noise and electromagnetic field (EMF) emissions, changes in habitats and oceanographic processes, risk of entanglement of animals, and displacement of animals (Boehlert & Gill 2010; Copping & Hemery 2020) (see Chapter 3).

16 TIDAL AND WAVE POWER↗

2024 OES-Environmental 2024 State of the Science Report, Chapter 11: Summary and Path Forward

The 2024 State of the Science report has brought together the most up-to-date information on potential environmental effects of marine renewable energy (MRE) development on marine animals, habitats, and ecosystem processes, as well as social and economic systems, using information that is publicly available as well as expert input. The report has been reviewed by over 56 experts. The reviewers provided in excess of one thousand comments during the drafting of the report that have been addressed in this version. The OES-Environmental country representatives from the 16 participating countries helped to scope the entirety of the report and provided valuable contributions to all chapters. The input from these contributors and reviewers has resulted in the most complete compendium of research and monitoring findings possible. While there is new and exciting research underway that should further illuminate the risks of MRE stressor-receptor interactions in the near future, suppositions and incomplete results from unpublished studies were not included in order to maintain the integrity, and decrease the uncertainty, of the messages in this report

16 TIDAL AND WAVE POWER↗

A Cretaceous-Tertiary mass extinction? Were most of Earth's species killed off?

For the past decade, the scientific and popular press have carried frequent articles about a catastrophic mass extinction that supposedly destroyed the majority of the earth's species, including the dinosaurs, approximately 65 million years ago. Since 1980, more than 2000 papers and books have dealt with some aspect of a mass extinction at the Cretaceous-Tertiary (K/T) boundary. One authoritative estimate of the severity of the extinctions is that 60-80% of all the living species became extinct at this boundary (Raup 1988). There appears to be a general acceptance of the fact that such a great catastrophe did occur. Most of the argument among scientists now is devoted to the determination of the cause. In this article, I argue that the species changes at the K/T boundary were neither sudden nor catastrophic. They were most likely caused by a regression of sea level that led to a decrease in primary production.

NASA Discipline Exobiology↗

Body size and early marine conditions drive changes in Chinook salmon productivity across northern latitude ecosystems

Disentangling the influences of climate change from other stressors affecting the population dynamics of aquatic species is particularly pressing for northern latitude ecosystems, where climate‐driven warming is occurring faster than the global average. Chinook salmon (Oncorhynchus tshawytscha) in the Yukon‐Kuskokwim (YK) region occupy the northern extent of their species' range and are experiencing prolonged declines in abundance resulting in fisheries closures and impacts to the well‐being of Indigenous people and local communities. These declines have been associated with physical (e.g., temperature, streamflow) and biological (e.g., body size, competition) conditions, but uncertainty remains about the relative influence of these drivers on productivity across populations and how salmon–environment relationships vary across watersheds. To fill these knowledge gaps, we estimated the effects of marine and freshwater environmental indicators, body size, and indices of competition, on the productivity (adult returns‐per‐spawner) of 26 Chinook salmon populations in the YK region using a Bayesian hierarchical stock‐recruitment model. Across most populations, productivity declined with smaller spawner body size and sea surface temperatures that were colder in the winter and warmer in the summer during the first year at sea. Decreased productivity was also associated with above average fall maximum daily streamflow, increased sea ice cover prior to juvenile outmigration, and abundance of marine competitors, but the strength of these effects varied among populations. Maximum daily stream temperature during spawning migration had a nonlinear relationship with productivity, with reduced productivity in years when temperatures exceeded thresholds in main stem rivers. These results demonstrate for the first time that well‐documented declines in body size of YK Chinook salmon were associated with declining population productivity, while taking climate into account.

54 ENVIRONMENTAL SCIENCES↗

Assessing the Potential Impact of River Chemistry on Arctic Coastal Production

The Arctic coastal margin receives a disproportionately large fraction of the global river discharge. The bio-geochemistry of the river water as it empties into the marine environment reflects inputs and processes that occur as the water travels from its headwaters. Climate-induced changes to Arctic vegetation and permafrost melt may impact river chemistry. Understanding the impact of river nutrients on coastal marine production, and how this may change in the future, are important for resource managers and community members who monitor and rely on coastal food resources. Using the Energy Exascale Earth System Model we explore the impact of timing and river nutrient concentrations on primary production in each coastal Arctic region and then assess how this influences secondary production and particle fluxes supporting the benthic food web. Our results indicate that while the concentration of Arctic river nitrogen can have a significant impact on annual average nitrogen and primary production in the coastal Arctic, with production increases of up to 20% in the river influenced interior Seas, the timing of the river nutrient inputs into the marine environment appears less important. Bloom timing and partitioning between small and large phytoplankton were minimally impacted by both river nutrient concentration and timing, suggesting that in general, coastal Arctic ecosystem dynamics will continue to be primarily driven by light availability, rather than nutrients. Under a doubling river nutrient scenario, the percentage increase in the POC flux to the benthos on river influenced Arctic coastal shelves was 2-4 times the percentage increase in primary production, suggesting changes to the river nutrient concentration has the potential to modify the Arctic food web structure and dynamics. Generally, the nutrient-induced changes to primary production were smaller than changes previously simulated in response to ice reduction and temperature increase. However, in the Laptev Sea, the production increase resulting from a doubling of river nutrients exceeded the production increase simulated with an atmospheric warming scenario. Dissolved organic carbon is presently poorly represented in the model so its impact on production is hard to simulate. Applying established relationships between modeled DOC, total DOC, and light absorption we illustrate that DOC could play a very important role in modulating production. Our findings highlight the importance of developing more realistic river nutrient and discharge forcing for Earth System Models such that their impact on the critical Arctic coastal domain can be more adequately resolved.

54 ENVIRONMENTAL SCIENCES↗

Phage resistance mutations in a marine bacterium impact biogeochemically relevant cellular processes

Phage–bacteria interactions shape ecology and biogeochemistry across biomes. Resistance, arising from their evolutionary arms race, is well documented for receptor mutations, but other resistance mechanisms and their ecological implications remain unexplored. Here we isolated, sequenced and characterized 13 phage-resistant mutants of marine Cellulophaga baltica (Flavobacteriia). Mechanistically, mutations in surface proteins provided broad and complete extracellular resistance against multiple phages through decreased adsorption. Intracellular mutations affecting serine, glycine and threonine metabolism produced narrower resistance against a single phage, permitting viral DNA replication, and, in one mutant, were shown to be lipid mediated. Putative ecosystem impacts inferred from in vitro experiments include: (1) altered carbon utilization for all mutants, but especially by surface ones, (2) increased metabolite secretion for one modelled intracellular mutant (including experimentally verified acetate) and (3) increased ‘stickiness’ for all mutants, with surface mutants also sedimenting faster. Our findings highlight new resistance mechanisms and suggest that the phage–host arms race could result in ecosystem-level biogeochemical impacts in marine microorganisms.

Urvoy, Marion [Ohio State University]↗

Fine scale transitions of the microbiota and metabolome along the gastrointestinal tract of herbivorous fishes

Abstract Background Gut microorganisms aid in the digestion of food by providing exogenous metabolic pathways to break down organic compounds. An integration of longitudinal microbial and chemical data is necessary to illuminate how gut microorganisms supplement the energetic and nutritional requirements of animals. Although mammalian gut systems are well-studied in this capacity, the role of microbes in the breakdown and utilization of recalcitrant marine macroalgae in herbivorous fish is relatively understudied and an emerging priority for bioproduct extraction. Here we use a comprehensive survey of the marine herbivorous fish gut microbial ecosystem via parallel 16S rRNA gene amplicon profiling (microbiota) and untargeted tandem mass spectrometry (metabolomes) to demonstrate consistent transitions among 8 gut subsections across five fish of the genus of Kyphosus . Results Integration of microbial phylogenetic and chemical diversity data reveals that microbial communities and metabolomes covaried and differentiated continuously from stomach to hindgut, with the midgut containing multiple distinct and previously uncharacterized microenvironments and a distinct hindgut community dominated by obligate anaerobes. This differentiation was driven primarily by anaerobic gut endosymbionts of the classes Bacteroidia and Clostridia changing in concert with bile acids, small peptides, and phospholipids: bile acid deconjugation associated with early midgut microbiota, small peptide production associated with midgut microbiota, and phospholipid production associated with hindgut microbiota. Conclusions The combination of microbial and untargeted metabolomic data at high spatial resolution provides a new view of the diverse fish gut microenvironment and serves as a foundation to understand functional partitioning of microbial activities that contribute to the digestion of complex macroalgae in herbivorous marine fish.

Sparagon, Wesley J. (ORCID:0000000296274174)↗

The 2025 “Hacking Limnology” Workshop Series and DSOS Virtual Summit: A Half Decade of Data‐Intensive Aquatic Science

The 5th Aquatic Ecosystem MOdeling Network—Junior (AEMON-J) “Hacking Limnology” Workshop and 6th Virtual Summit: Incorporating Data Science and Open Science in the Aquatic Sciences (DSOS) convened 21–25 July 2025. As in previous years (Fig. 1; Meyer and Zwart 2020; Meyer et al. 2021b, 2021c, 2022, 2024), the virtual workshops and summit were free of charge, the content was formatted to allow for broad engagement from a globally distributed audience, and workshop materials and recordings were made available on the AEMON-J/DSOS archive (Meyer et al. 2021a). In contrast to previous years, which primarily focused on inland aquatic ecosystems, this year's workshops and summit showcased a notable plurality of ecosystem types, with workshops spanning marine, riverine, and lacustrine environments. The weeklong event brought together researchers and practitioners interested in the nexus of data science, open science, and the aquatic sciences, hosting between 47 and 65 attendees at a single time and a higher number of registrants (n = 389), who might opt to access the material asynchronously.

Meyer, Michael F. [US Geological Survey, Portland,↗

State of the Carbon Cycle - Consequences of Rising Atmospheric CO2

The rise of atmospheric CO2, largely attributable to human activity through fossil fuel emissions and land-use change, has been dampened by carbon uptake by the ocean and terrestrial biosphere. We outline the consequences of this carbon uptake as direct and indirect effects on terrestrial and oceanic systems and processes for different regions of North America and the globe. We assess the capacity of these systems to continue to act as carbon sinks. Rising CO2 has decreased seawater pH; this process of ocean acidification has impacted some marine species and altered fundamental ecosystem processes with further effects likely. In terrestrial ecosystems, increased atmospheric CO2 causes enhanced photosynthesis, net primary production, and increased water-use efficiency. Rising CO2 may change vegetation composition and carbon storage, and widespread increases in water use efficiency likely influence terrestrial hydrology and biogeochemical cycling. Consequences for human populations include changes to ecosystem services including cultural activities surrounding land use, agricultural or harvesting practices. Commercial fish stocks have been impacted and crop production yields have been changed as a result of rising CO2. Ocean and terrestrial effects are contingent on, and feedback to, global climate change. Warming and modified precipitation regimes impact a variety of ecosystem processes, and the combination of climate change and rising CO2 contributes considerable uncertainty to forecasting carbon sink capacity in the ocean and on land. Disturbance regime (fire and insects) are modified with increased temperatures. Fire frequency and intensity increase, and insect lifecycles are disrupted as temperatures move out of historical norms. Changes in disturbance patterns modulate the effects of rising CO2 depending on ecosystem type, disturbance frequency, and magnitude of events. We discuss management strategies designed to limit the rise of atmospheric CO2 and reduce uncertainty in forecasts of decadal and centennial feedbacks of rising atmospheric CO2 on carbon storage.

Carbon Cycle↗

Biogeochemical Effects of Rising Atmospheric CO2 on Terrestrial and Ocean Systems

Rising carbon dioxide (CO2) has decreased seawater pH at long-term observing stations around the world, including in the open ocean north of Oahu, Hawaii, near Alaska's Aleutian Islands, the Gulf of Maine shore, and on Gray's Reef in the southeastern United States. This ocean acidification process has already affected some marine species and altered fundamental ecosystem processes, and further effects are likely. While atmospheric CO rises at approximately the same rate all over the globe, its non-climate effects on land vary depending on climate and dominant species. In terrestrial ecosystems, rising atmospheric CO concentrations are expected to increase plant photosynthesis, growth, and water-use efficiency, though these effects are reduced when nutrients, drought or other factors limit plant growth. Rising CO would likely change carbon storage and influence terrestrial hydrology and biogeochemical cycling, but concomitant effects on vegetation composition and nutrient feedbacks are challenging to predict, making decadal forecasts uncertain. Consequences of rising atmospheric CO are expected to include difficult-to-predict changes in the ecosystem services that terrestrial and ocean systems provide to humans. For instance, ocean acidification resulting from rising CO has decreased the supply of larvae that sustains commercial shellfish production in the northwestern United States. In addition, CO fertilization (increases) plus warming (decreases) are changing terrestrial crop yields. Continued persistence of uptake of carbon by the land and ocean is uncertain. Climate and environmental change create complex feedbacks to the carbon cycle and it is not clear how feedbacks modulate future effects of rising CO on carbon sinks. These are several mechanisms that could reduce future sink capacity.

Biogeochemical↗

Wetlands Delineation Report and Classification: PNNL – Sequim (formerly MSL) Estuary Wetland Delineation

The Pacific Northwest National Laboratory (PNNL) – Sequim, historically known as the Marine Sciences Laboratory (MSL) in Sequim, Washington, is managed and operated by Battelle on behalf of the U.S. Department of Energy (DOE) Pacific Northwest Site Office (PNSO). The site provides capabilities for future energy research, climate change effects analyses, wetland and coastal ecosystem restoration, other environmental research involving marine resources and hosts the only marine research facilities in the Department of Energy National Laboratory Complex. In order to support campus development, maintenance, and potential research activities, a wetland delineation was conducted on the northern portion of campus in accordance with state and federal wetland regulations. This technical report details out the delineation.

54 ENVIRONMENTAL SCIENCES↗

Metabolites from intact phage-infected Synechococcus chemotactically attract heterotrophic marine bacteria

Chemical cues mediate interactions between marine phytoplankton and bacteria, underpinning ecosystem-scale processes including nutrient cycling and carbon fixation. Phage infection alters host metabolism, stimulating the release of chemical cues from intact plankton, but how these dynamics impact ecology and biogeochemistry is poorly understood. Here we determine the impact of phage infection on dissolved metabolite pools from marine cyanobacteria and the subsequent chemotactic response of heterotrophic bacteria using time-resolved metabolomics and microfluidics. Metabolites released from intact, phage-infected Synechococcus elicited strong chemoattraction from Vibrio alginolyticus and Pseudoalteromonas haloplanktis, especially during early infection stages. Sustained bacterial chemotaxis occurred towards live-infected Synechococcus, contrasted by no discernible chemotaxis towards uninfected cyanobacteria. High-throughput microfluidics identified 5′-deoxyadenosine and 5′-methylthioadenosine as key attractants. Our findings establish that, before lysis, phage-infected picophytoplankton release compounds that attract motile heterotrophic bacteria, suggesting a mechanism for resource transfer that might impact carbon and nutrient fluxes across trophic levels.

Henshaw, Richard J↗

Satellite Remote Sensing: Ocean Color

Satellite ocean color instruments routinely provide global, synoptic views of the Earth's marine biosphere. These spaceborne radiometers measure light exiting the top of the atmosphere at discrete wavelengths in the ultraviolet to shortwave infrared region of the spectrum. This includes measurements of the color of the ocean - information used to infer the contents of the sunlit upper ocean, such as concentrations of phytoplankton, suspended sediments, and dissolved organic carbon. Continuous marine biological, ecological, and biogeochemical data records from satellite ocean color instruments now span over twenty years. This time-series not only supports Earth system and climate research, but also ecosystem and watershed management activities, including detection of nuisance and harmful algal blooms.

Biosphere↗

NASA Fluid Lensing & MiDAR - Next-Generation Remote Sensing Technologies for Aquatic Remote Sensing

Piti's Tepungan Bay and Tumon Bay, two of five marine preserves in Guam, have not been mapped to a level of detail sufficient to support proposed management strategies. This project addresses this gap by providing high resolution maps to promote sustainable, responsible use of the area while protecting natural resources. Dr. Chirayath, a research scientist at the NASA Ames Laboratory, developed a theoretical model and algorithm called 'Fluid Lensing'. Fluid lensing removes optical distortions caused by moving water, improving the clarity of the images taken of the corals below the surface. We will also be using MiDAR, a next-generation remote sensing instrument that provides real-time multispectral video using an array of LED emitters coupled with NASA's FluidCam Imaging System, which may assist Guam's coral reef response team in understanding the severity and magnitude of coral bleaching events. This project will produce a 3D orthorectified model of the shallow water coral reef ecosystems in Tumon Bay and Piti marine preserves. These 3D models may be printed, creating a tactile diorama and increasing understanding of coral reefs among various audiences, including key decision makers. More importantly, the final data products can enable accurate and quantitative health assessment capabilities for coral reef ecosystems.

Aquatic↗