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At least 217 records · Page 12

Spatiotemporal Metabolic Network Models Reveal Complex Autotroph-Heterotroph Biofilm Interactions Governed by Photon Incidences

Autotroph-heterotroph interactions are ubiquitous in natural environment and play a key role in controlling various essential ecosystem functions, such as production and utilization of organic matter, cycling of nitrogen, sulfur, and other chemical elements. Understanding how these biofilm metabolic interactions are constrained in space and time remains challenging because fully predictive models designed for this purpose are currently limited. Toward filling this gap, here we developed community metabolic network models for two autotroph-heterotroph biofilm consortia (termed UCC-A and UCC-O), which share a suite of common heterotrophic members but have a single distinct photoautotrophic cyanobacterium (Phormidesmis priestleyi str. ANA and Phormidium sp. OSCR) that provides organic carbon and nitrogen sources to support the growth of heterotrophic partners. After determining model parameters by data fitting using the spatiotemporal distributions of microbial abundances, we comparatively analyzed the resulting biofilm models to examine any fundamental differences in microbial interactions between the two consortia under the variation of key environmental variables: CO2 and photon levels. The UCC-A model predicted generally expected responses, i.e., the autotroph population increased in response to elevated levels of CO2 and photon, followed by increase in the heterotroph population. In contrast, the UCC-O model showed somewhat complicated dynamics, e.g., higher photon incidence rates resulted in the increase in autotroph population but decrease in heterotroph population due to the lowered provision of glucose from the autotroph. A further analysis showed that species coexistence was governed by the photon incidences rather than the carbon availability for UCC-O, which was the opposite for UCC-A.

Phalak, Poonam↗

A form-factor method for determining the structure of distorted stars

The equilibrium equations of a uniformly rotating and tidally distorted star are reduced to the same form as for a spherical star except for the inclusion of two form factors. One factor, expressing the buoyancy effects of centrifugal force, is determined directly from the integrated structure variables. The other factor, expressing the deviation from spherical shape, is shown to be relatively insensitive to errors in the assumed shape, so that accurate solutions are obtained in spite of the use of an a priori shape. The method is employed by adding computations for the factors to an existing spherical model program. Upper Main Sequence models determined by this method compare closely with results from the double approximation method even for critical rotation and tidal distortion.

Wolfe, R. H., Jr.↗

Computational design aspects of a NASP nozzle/afterbody experiment

This paper highlights the influence of computational methods on design of a wind tunnel experiment which generically models the nozzle/afterbody flow field of the proposed National Aerospace Plane. The rectangular slot nozzle plume flow field is computed using a three-dimensional, upwind, implicit Navier-Stokes solver. Freestream Mach numbers of 5.3, 7.3, and 10 are investigated. Two-dimensional parametric studies of various Mach numbers, pressure ratios, and ramp angles are used to help determine model loads and afterbody ramp angle and length. It was found that the center of pressure on the ramp occurs at nearly the same location for all ramp angles and test conditions computed. Also, to prevent air liquefaction, it is suggested that a helium-air mixture be used as the jet gas for the highest Mach number test case.

Ruffin, Stephen M.↗

Coordinated Optimization and Control of Residential Solid State Power Substations in Electrical Distribution Network

This paper proposes a computationally efficient mixed integer linear programming (MILP) model for the coordinated optimization of solid-state power substations (SSPSs) in a feeder considering the full unbalanced three-phase structure of the distribution grid and its characteristics. The proposed model determines the optimal real and reactive power of each SSPS at the point of common coupling (PCC) that minimizes the operating cost and maximizes the system performance, e.g., voltage regulation and phase balancing. To improve the computational efficiency, an inscribed octagon is introduced to approximate the quadratic capacity constraints of components. Numerical simulation results show the effectiveness of the proposed model and significant improvements in voltage profiles and power imbalance between phases.

Liu, Guodong↗

Adding GPU Support to the Markov Chain Monte Carlo Code Catmip

In geophysics, we are confronted with many under-determined inverse problems. For example, all of our observations of earthquakes are made at the Earth’s surface. So, when we try to infer how slip during an earthquake evolves in space and time, we find that there are many potential slip histories that are consistent with our limited observations and our understanding of earthquake physics. One way to approach these problems is with Bayesian analysis which allows us to infer the ensemble of all potential slip models that satisfy the observations and our prior knowledge of earthquake physics. In Bayesian analysis, our prior knowledge is known as the prior probability density function or prior PDF, the fit to the data is known as the data likelihood, and the target PDF that satisfies both the prior PDF and data likelihood is known as the posterior PDF. However, simulating the posterior PDF typically requires using Markov Chain Monte Carlo (MCMC) to draw tens of billions of random realizations of earthquake slip models, which may not be computationally feasible. To make this and similar geophysical inversions computationally tractable, we developed the Cascading Adaptive Transitional Metropolis In Parallel (CATMIP) algorithm. CATMIP is an efficient parallel Markov Chain Monte Carlo (MCMC) sampler that is used for model fitting and uncertainty quantification in geophysics. Example use cases are earthquake rupture modeling, determining mineral composition on Mars, reconstructing the history of ocean salinity, and historical earthquake relocation. CATMIP employs many parallel instances of the Metropolis algorithm for sampling in a transitioning framework. Transitioning is a process in which a set of random samples at equilibrium with a known probability density function (PDF) are used as seeds for the Markov chains to sample successive target PDFs that incrementally move the distribution from the starting seeds to the final desired PDF that describes the relative plausibility of potential values for the model parameters. The algorithm is implemented as a Master-Worker model employing MPI for communication. The worker processes are loosely coupled with global parameters periodically optimized by the master process. This provides a very high amount of parallelism with little communication between updates. During the presentation we will discuss the history of the algorithm and elaborate the earthquake rupture modeling use case for the CATMIP package. Our first step toward GPU optimization was to optimize the code for the CPU. CPU profiling revealed that most of the compute time is spent in calls to level 2 BLAS routines and calls to GSL random number generators. We revised the algorithm to employ level 3 BLAS routines instead. In our presentation we will describe how this was accomplished. Adding GPU support to CATMIP consisted mostly of replacing the calls to GSL with calls to GPU vendor-provided library routines. A small number of loops were directly implemented in CUDA. In the presentation will provide implementation details. Finally, we will discuss methods for profiling and opportunities for further optimizing GPU execution. By creating a code with the flexibility to run on either a CPU or GPU architecture, CATMIP can be used on systems ranging from large CPU-based HPC environments to single servers with GPU acceleration and everything in between.

HECC↗

Integration of a Finite Element Model with the DAP Bone Remodeling Model to Characterize Bone Response to Skeletal Loading

NASA's Digital Astronaut Project (DAP) has developed a bone remodeling model that has been validated for predicting volumetric bone mineral density (vBMD) changes of trabecular and cortical bone in the absence of mechanical loading. The model was recently updated to include skeletal loading from exercise and free living activities to maintain healthy bone using a new daily load stimulus (DLS). This new formula was developed based on an extensive review of existing DLS formulas, as discussed in the abstract by Pennline et al. The DLS formula incorporated into the bone remodeling model utilizes strains and stress calculated from finite element model (FEM) of the bone region of interest. The proximal femur was selected for the initial application of the DLS formula, with a specific focus on the femoral neck. METHODS: The FEM was generated from CAD geometry of a femur using de-identified CT data. The femur was meshed using linear tetrahedral elements Figure (1) with higher mesh densities in the femoral neck region, which is the primary region of interest for the initial application of the DLS formula in concert with the DAP bone remodeling model. Nodal loads were applied to the femoral head and the greater trochanter and the base of the femur was held fixed. An L2 norm study was conducted to reduce the length of the femoral shaft without significantly impacting the stresses in the femoral neck. The material properties of the FEM of the proximal femur were separated between cortical and trabecular regions to work with the bone remodeling model. Determining the elements with cortical material properties in the FEM was based off of publicly available CT hip scans [4] that were segmented, cleaned, and overlaid onto the FEM.

Bone Remodeling↗

An Empirical Model for Vane-Type Vortex Generators in a Navier-Stokes Code

An empirical model which simulates the effects of vane-type vortex generators in ducts was incorporated into the Wind-US Navier-Stokes computational fluid dynamics code. The model enables the effects of the vortex generators to be simulated without defining the details of the geometry within the grid, and makes it practical for researchers to evaluate multiple combinations of vortex generator arrangements. The model determines the strength of each vortex based on the generator geometry and the local flow conditions. Validation results are presented for flow in a straight pipe with a counter-rotating vortex generator arrangement, and the results are compared with experimental data and computational simulations using a gridded vane generator. Results are also presented for vortex generator arrays in two S-duct diffusers, along with accompanying experimental data. The effects of grid resolution and turbulence model are also examined.

Dudek, Julianne C.↗

On the determination of airplane model structure form flight data

A procedure based on a modified stepwise regression and several selection criteria is presented for the determination of airplane model structure from flight data. The aerodynamic force and moment coefficients in an airplane model are expresed either as polynomials in output and input variables or as a combination of splines. The procedure is demonstrated in three examples by attempting to determine a local, extended and global model. Some of the resulting models are verified by using the maximum likelihood estimation or by examining model prediction capabilities.

Klein, V.↗

Uncertainty quantification and reliability assessment for intermodal freight transportation

Intermodal freight optimization models support cost-effective, low-emission, and timely goods movement by coordinating trucks, rail, and barges. These models determine optimal flows, routing, and modal switches while respecting infrastructure and operational constraints. However, their real-world utility is often undermined by pervasive uncertainties-such as fluctuating transportation costs and emissions, variable terminal capacities, and uncertain freight demand-that distort key performance outcomes, including total system cost, carbon footprint, and transit time reliability. This study presents a structured framework for quantifying uncertainty in intermodal freight transportation (IFT) optimization. The framework evaluates how input uncertainty affects system performance and reliability, a critical need for ensuring that model-based decisions remain robust under real-world variability, especially amid volatile fuel prices, shifting demand, and growing disruptions. It integrates three complementary methods: (1) Sobol-based global sensitivity analysis to identify influential parameters affecting cost, emissions, and transit time, (2) Monte Carlo-based capacity perturbation analysis to assess robustness under probabilistic facility disruptions, and (3) Monte Carlo filtering with Bayesian inference to detect threshold-based performance vulnerabilities. The results highlight diesel truck unit cost as the dominant driver of variability. To improve system resilience, planners should prioritize uncertainty in fuel-related parameters when designing intermodal strategies.

Intermodal freight transportation↗

Aeroelastic Tests of an Eight Percent Scale Saturn C-1 Block II

Buffet and flutter characteristics of Saturn Apollo mission were studied using a dynamically scaled model. The model was built around a central aluminum tube for scaled stiffness distribution and strength to resist loads imposed during testing. Styrofoam sections attached to the core provided the correct external contours. Lead weights were added for correct mass distribution. An electromagnetic shaker was used to excite the model in its flexible modes of vibration during portions of the test. The model was supported on a sting, mounted by leaf springs, cables and torsion bars. The support system provided for simulating the full scale rigid body pitch frequency with minimum restraint imposed on elastic deflections. Bending moments recorded by sensors on the aluminum tube. Several modified nose configurations were tested: The basic configuration was tested with and without a flow separator disk on the escape rocket motor, tests also were made with the escape tower and rocket motor removed completely. For the final test, the Apollo capsule was replaced with a Jupiter nose cone. The test program consisted of determining model response throughout the transonic speed range at angles of attack up to 6 degrees and measuring the aerodynamic damping over the same range for the basic model and the modified configurations. Signals from the model pickup were recorded on tape for later analysis. The data obtained were used to estimate bending moments that would be produced on the full-scale vehicle by aerodynamic forces due to buffeting.

EXPERIMENTS↗

Implications for Core Formation of the Earth from High Pressure-Temperature Au Partitioning Experiments

Siderophile elements in the Earth.s mantle are depleted relative to chondrites. This is most pronounced for the highly siderophile elements (HSEs), which are approximately 400x lower than chondrites. Also remarkable is the relative chondritic abundances of the HSEs. This signature has been interpreted as representing their sequestration into an iron-rich core during the separation of metal from silicate liquids early in the Earth's history, followed by a late addition of chondritic material. Alternative efforts to explain this trace element signature have centered on element partitioning experiments at varying pressures, temperatures, and compositions (P-T-X). However, first results from experiments conducted at 1 bar did not match the observed mantle abundances, which motivated the model described above, a "late veneer" of chondritic material deposited on the earth and mixed into the upper mantle. Alternatively, the mantle trace element signature could be the result of equilibrium partitioning between metal and silicate in the deep mantle, under P-T-X conditions which are not yet completely identified. An earlier model determined that equilibrium between metal and silicate liquids could occur at a depth of approximately 700 km, 27(plus or minus 6) GPa and approximately 2000 (plus or minus 200) C, based on an extrapolation of partitioning data for a variety of moderately siderophile elements obtained at lower pressures and temperatures. Based on Ni-Co partitioning, the magma ocean may have been as deep as 1450 km. At present, only a small range of possible P-T-X trace element partitioning conditions has been explored, necessitating large extrapolations from experimental to mantle conditions for tests of equilibrium models. Our primary objective was to reduce or remove the additional uncertainty introduced by extrapolation by testing the equilibrium core formation hypothesis at P-T-X conditions appropriate to the mantle.

Danielson, L. R.↗

Lateral and longitudinal stability and control parameters for the space shuttle discovery as determined from flight test data

The Discovery vehicle was found to have longitudinal and lateral aerodynamic characteristics similar to those of the Columbia and Challenger vehicles. The values of the lateral and longitudinal parameters are compared with the preflight data book. The lateral parameters showed the same trends as the data book. With the exception of C sub l sub Beta for Mach numbers greater than 15, C sub n sub delta r for Mach numbers greater than 2 and for Mach numbers less than 1.5, where the variation boundaries were not well defined, ninety percent of the extracted values of the lateral parameters fell within the predicted variations. The longitudinal parameters showed more scatter, but scattered about the preflight predictions. With the exception of the Mach 1.5 to .5 region of the flight envelope, the preflight predictions seem a reasonable representation of the Shuttle aerodynamics. The models determined accounted for ninety percent of the actual flight time histories.

Suit, William T.↗

Construction of the damped Ly⁢𝛼 absorber catalog for DESI DR2 Ly⁢𝛼 BAO

We present the Damped Ly⁢𝛼 Toolkit for automated detection and characterization of damped Ly⁢𝛼 absorbers (DLAs) in quasar spectra. Our method uses quasar spectral templates with and without absorption from intervening DLAs to reconstruct observed quasar forest regions. The best-fitting model determines whether a DLA is present while estimating the redshift and HI column density. With an optimized quality cut on detection significance (Δ⁢𝜒$^{2}_{𝑟}$ >0.03), the technique achieves an estimated 80% purity and 79% completeness when evaluated on simulated spectra with S/N>2 that are free of broad absorption lines (BALs). We provide a catalog containing candidate DLAs from the DLA Toolkit detected in DESI DR1 quasar spectra, of which 21 719 were found in S/N>2 spectra with predicted log 10 ⁡(𝑁 𝙷𝙸 )>20.3 and detection significance Δ⁢𝜒$^{2}_{𝑟}$ >0.03. We compare the Damped Ly⁢𝛼 Toolkit to two alternative DLA finders based on a convolutional neural network and Gaussian process models. We present a strategy for combining these three techniques to produce a high-fidelity DLA catalog from DESI DR2 for the Ly⁢𝛼 forest baryon acoustic oscillation measurement. The combined catalog contains 41 152 candidate DLAs with log 10 ⁡(𝑁 𝙷𝙸 )>20.3 from quasar spectra with S/N>2. We estimate this sample to be approximately 85% pure and 79% complete when BAL quasars are excluded.

79 ASTRONOMY AND ASTROPHYSICS↗

Towards the 1 mm/y Stability of the Radial Orbit Error at Regional Scales

An estimated orbit error budget for the Jason-1 and Jason-2 GDR-D solutions is constructed, using several measures of orbit error. The focus is on the long-term stability of the orbit time series for mean sea level applications on a regional scale. We discuss various issues related to the assessment of radial orbit error trends; in particular this study reviews orbit errors dependent on the tracking technique, with an aim to monitoring the long-term stability of all available tracking systems operating on Jason-1 and Jason-2 (GPS, DORIS, SLR). The reference frame accuracy and its effect on Jason orbit is assessed. We also examine the impact of analysis method on the inference of Geographically Correlated Errors as well as the significance of estimated radial orbit error trends versus the time span of the analysis. Thus a long-term error budget of the 10-year Jason-1 and Envisat GDR-D orbit time series is provided for two time scales: interannual and decadal. As the temporal variations of the geopotential remain one of the primary limitations in the Precision Orbit Determination modeling, the overall accuracy of the Jason-1 and Jason-2 GDR-D solutions is evaluated through comparison with external orbits based on different time-variable gravity models. This contribution is limited to an East-West "order-1" pattern at the 2 mm/y level (secular) and 4 mm level (seasonal), over the Jason-2 lifetime. The possibility of achieving sub-mm/y radial orbit stability over interannual and decadal periods at regional scales and the challenge of evaluating such an improvement using in situ independent data is discussed.

Precision Orbit Determination (POD)↗

Evolution of the intergalactic medium - What happened during the epoch z = 3-10?

An attempt is made to model consistently the thermal and dynamic history of the intergalactic medium (IGM) from the era of reheating (z = 10-5) to the present, and to provide a unified explanation for the origin of ordinary galaxies, blue compact objects, and Lyman-alpha clouds. The evolution of the intergalactic gas is analyzed, treating the IGM as perfectly homogeneous at every epoch and taking into account radiative and Compton cooling, adiabatic cooling, shock heating, and heating produced by the diffuse UV flux. It is suggested that the IGM must have been heated to higher than a 10 to the 6th K by shock heasting caused either by explosions of pregalactic objects or expanding voids. The formation of intergalactic clouds by fragmentation of the resulting shells and the subsequent collapse of the shells to form galaxies are studied. An attempt is made to determine model parameters on the basis of an analysis of Lyman-alpha absorption lines.

Ikeuchi, S.↗

Unraveling trace anomaly of supradense matter via neutron star compactness scaling

The trace anomaly Δ ≡ 1/3 −𝑃/𝜖 =1/3 −𝜙 quantifies the possibly broken conformal symmetry in supradense matter under pressure 𝑃 at energy density 𝜖. Perturbative QCD (pQCD) predicts a vanishing Δ at extremely high energy or baryon densities when the conformal symmetry is realized but its behavior at intermediate densities reachable in neutron stars (NSs) is still very uncertain. The extraction of Δ from NS observations strongly depends on the employed model for nuclear equation of state (EOS). Using the IPAD-TOV method based on an intrinsic and perturbative analysis of the dimensionless (IPAD) Tolman-Oppenheimer-Volkoff (TOV) equations that are further verified numerically by using 10 5 EOSs generated randomly with a metamodel in a very broad EOS parameter space constrained by terrestrial nuclear experiments and astrophysical observations, here we first show that the compactness 𝜉 ≡ 𝐺⁡𝑀 NS /𝑅⁢𝑐 2 ≡ 𝑀 NS /𝑅 of a NS with mass 𝑀 NS and radius 𝑅 scales very accurately with $\bar{Π}$ c ≡ $Π$ c · (1 +18⁢X/25) ≡ X/(1 +3⁢X 2 +4⁢X) · (1 +18⁢X/25) where X ≡ 𝜙 c = 𝑃 c /𝜖 c is the ratio of pressure over energy density at NS centers. The scaling of NS compactness thus enables one to readily read off the central trace anomaly Δ c = 1/3 −X directly from the observational data of either the mass-radius or red-shift measurements. Finally, we then demonstrate indeed that the available NS data themselves from recent X-ray and gravitational wave observations can determine model insensitively the trace anomaly as a function of energy density in NS cores, providing a stringent test of existing NS models and a clear guidance in a new direction for further understanding the nature and EOS of supradense matter.

nuclear astrophysics↗

Polysulfide reduction and Li 2 S phase formation in the presence of lithium metal and solid electrolyte interphase layer

Lithium sulfur battery is an attractive next generation technology that can meet many demands of modern society. Unfortunately, the lithium sulfur battery faces unique issues related to the polysulfide shuttle effect, that is due to reduction products dissolving in the electrolyte and their subsequent reduction on the lithium metal electrode. This adds further problems to the already challenging needs of understanding and engineering a solid electrolyte interphase (SEI) layer with desired properties. One of the most important SEI properties is its passivation of lithium metal which is critically important to the overall battery performance. Passivation is difficult to measure experimentally without the influence of many factors. This study reports an investigation of the reduction of the intermediate Li 2 S 8 over lithium already passivated with Li 2 O, Li 2 CO 3 , LiOH, LiF and Li 2 S along with exploration of Li 2 S 8 reduction over pristine lithium nanoclusters using first principles computational models. Significant formation of Li 2 S phase nucleation is found to stabilize the reduction products of the Li 2 S 8 . Here, the formation of Li 2 S is explored in-depth with lithium nanocluster-based models determining a 2 V potential increase for the reduction of polysulfides due to the formation of Li 2 S. This investigation demonstrates passivation effects of important SEI components including Li 2 S.

25 ENERGY STORAGE↗