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Search indexed NASA NTRS and DOE OSTI research on propulsion, heat transfer, battery materials and energy systems. Follow report and document links to the original sources.

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At least 217 records · Page 12

Energy Minimization of Discrete Protein Titration State Models Using Graph Theory

There are several applications in computational biophysics which require the optimization of discrete interacting states; e.g., amino acid titration states, ligand oxidation states, or discrete rotamer angles. Such optimization can be very time-consuming as it scales exponentially in the number of sites to be optimized. In this paper, we describe a new polynomial-time algorithm for optimization of discrete states in macromolecular systems. This algorithm was adapted from image processing and uses techniques from discrete mathematics and graph theory to restate the optimization problem in terms of maximum flow-minimum cut graph analysis. The interaction energy graph, a graph in which vertices (amino acids) and edges (interactions) are weighted with their respective energies, is transformed into a flow network in which the value of the minimum cut in the network equals the minimum free energy of the protein, and the cut itself encodes the state that achieves the minimum free energy. Because of its deterministic nature and polynomial-time performance, this algorithm has the potential to allow for the ionization state of larger proteins to be discovered.

energy minimization↗

A finite volume method for calculating transonic potential flow around wings from the pressure minimum integral

Analysis of the pressure minimum integral in the calculation of three-dimensional potential flow around wings makes it possible to use non-rectangular mesh networks for distributing the three-dimensional potential into discrete points. The method is comparatively easily expanded to the treatment of realistic airplane configurations. Shock-pressure affected pressure distributions on any wings are determined with accuracy using this method.

Eberle, A.↗

A strategy for reducing turnaround time in design optimization using a distributed computer system

There is a need to explore methods for reducing lengthly computer turnaround or clock time associated with engineering design problems. Different strategies can be employed to reduce this turnaround time. One strategy is to run validated analysis software on a network of existing smaller computers so that portions of the computation can be done in parallel. This paper focuses on the implementation of this method using two types of problems. The first type is a traditional structural design optimization problem, which is characterized by a simple data flow and a complicated analysis. The second type of problem uses an existing computer program designed to study multilevel optimization techniques. This problem is characterized by complicated data flow and a simple analysis. The paper shows that distributed computing can be a viable means for reducing computational turnaround time for engineering design problems that lend themselves to decomposition. Parallel computing can be accomplished with a minimal cost in terms of hardware and software.

Young, Katherine C.↗

General Fluid System Simulation Program to Model Secondary Flows in Turbomachinery

The complexity and variety of turbomachinery flow circuits created a need for a general fluid system simulation program for test data anomaly resolution as well as design review. The objective of the paper is to present a computer program that has been developed to support Marshall Space Flight Center's turbomachinery internal flow analysis efforts. The computer program solves for the mass. energy and species conservation equation at each node and flow rate equation at each branch of the network by a novel numerical procedure which is a combination of both Newton-Ralphson and successive substitution method and uses a thermodynamic property program for computing real gas properties. A generalized, robust, modular, and 'user-friendly' computer program has been developed to model internal flow rates, pressures, temperatures, concentrations of gas mixtures and axial thrusts. The program can be used for any network for compressible and incompressible flows, choked flow, change of phase and gaseous mixturecs. The code has been validated by comparing the predictions with Space Shuttle Main Engine test data.

Majumdar, Alok K.↗

A title-gap flow model for use in aerodynamic loads assessment of space shuttle thermal protection system: Parallel gap faces

The problem of predicting aerodynamic loads on the insulating tiles of the space shuttle thermal protection system (TPS) is discussed and seen to require a method for predicting pressure and mass flux in the gaps between tiles. A mathematical model of the tile-gap flow is developed, based upon a slow viscous (Stokes) flow analysis, and is verified against experimental data. The tile-gap pressure field is derived from a solution of the two-dimensional Laplace equation; the mass-flux vector is then calculated from the pressure gradient. The means for incorporating this model into a lumped-parameter network analogy for porous-media flow is given. The means for incorporating this model into a lumped-parameter network analogy for porous-media flow is given. The flow model shows tile-gap mass flux to be very sensitive to the gap width indicating a need for coupling the TPS flow and tile displacement calculation. Analytical and experimental work to improve TPS flow predictions and a possible shuttle TPS hardware modification are recommended.

Dwoyer, D. L.↗

Topological Relationship–Based Flow Direction Modeling: Mesh–Independent River Networks Representation

River networks are important features in surface hydrology. However, accurately representing river networks in spatially distributed hydrologic and Earth system models is often sensitive to the model's spatial resolution. Specifically, river networks are often misrepresented because of the mismatch between the model's spatial resolution and river network details, resulting in significant uncertainty in the projected flow direction. In this study, we developed a topological relationship-based river network representation method for spatially distributed hydrologic models. This novel method uses (a) graph theory algorithms to simplify real-world vector-based river networks and assist in mesh generation; and (b) a topological relationship-based method to reconstruct conceptual river networks. The main advantages of our method are that (a) it combines the strengths of vector-based and DEM raster-based river network extraction methods; and (b) it is mesh-independent and can be applied to both structured and unstructured meshes. This method paves a path for advanced terrain analysis and hydrologic modeling across different scales.

54 ENVIRONMENTAL SCIENCES↗

Composition and Realization of Source-to-Sink High-Performance Flows: File Systems, Storage, Hosts, LAN and WAN

A number of Department of Energy (DOE) science applications, involving exascale computing systems and large experimental facilities, are expected to generate large volumes of data, in the range of petabytes to exabytes, which will be transported over wide-area networks for the purpose of storage, visualization, and analysis. To support such capabilities, significant progress has been made in various components including the deployment of 100 Gbps networks with future 1 Tbps bandwidth, increases in end-host capabilities with multiple cores and buses, capacity improvements in large disk arrays, and deployment of parallel file systems such as Lustre and GPFS. High-performance source-to-sink data flows must be composed of these component systems, which requires significant optimizations of the storage-to-host data and execution paths to match the edge and long-haul network connections. In particular, end systems are currently supported by 10-40 Gbps Network Interface Cards (NIC) and 8-32 Gbps storage Host Channel Adapters (HCAs), which carry the individual flows that collectively must reach network speeds of 100 Gbps and higher. Indeed, such data flows must be synthesized using multicore, multibus hosts connected to high-performance storage systems on one side and to the network on the other side. Current experimental results show that the constituent flows must be optimally composed and preserved from storage systems, across the hosts and the networks with minimal interference. Furthermore, such a capability must be made available transparently to the science users without placing undue demands on them to account for the details of underlying systems and networks. And, this task is expected to become even more complex in the future due to the increasing sophistication of hosts, storage systems, and networks that constitute the high-performance flows. The objectives of this proposal are to (1) develop and test the component technologies and their synthesis methods to achieve source-to-sink high-performance flows, and (2) develop tools that provide these capabilities through simple interfaces to users and applications. In terms of the former, we propose to develop (1) optimization methods that align and transition multiple storage flows to multiple network flows on multicore, multibus hosts; and (2) edge and long-haul network path realization and maintenance using advanced provisioning methods including OSCARS and OpenFlow. We also propose synthesis methods that combine these individual technologies to compose high-performance flows using a collection of constituent storage-network flows, and realize them across the storage and local network connections as well as long-haul connections. We propose to develop automated user tools that profile the hosts, storage systems, and network connections; compose the source-to-sink complex flows; and set up and maintain the needed network connections. These solutions will be tested using (1) 100 Gbps connection(s) between Oak Ridge National Laboratory (ORNL) and Argonne National Laboratory (ANL) with storage systems supported by Lustre and GPFS file systems with an asymmetric connection to University of Memphis (UM); (2) ORNL testbed with multicore and multibus hosts, switches with OpenFlow capabilities, and network emulators; and (3) 100 Gbps connections from ESnet and their Openflow testbed, and other experimental connections. This proposal brings together the expertise and facilities of the two national laboratories, ORNL and ANL, and UM. It also represents a collaboration between DOE and the Department of Defense (DOD) projects at ORNL by sharing technical expertise and personnel costs, and leveraging the existing DOD Extreme Scale Systems Center (ESSC) facilities at ORNL.

97 MATHEMATICS AND COMPUTING↗

Flow through the tile gaps in the Space Shuttle Thermal Protection System

The problem of predicting aerodynamic loads on the insulating tiles of the Space Shuttle Thermal Protection System (TPS) is discussed and seen to require a method for predicting pressure and mass flux in the gaps between tiles. A mathematical model of the tile-gap flow is developed based upon a slow viscous (Stokes) flow analysis and is verified against available experimental data. This model derives the tile-gap pressure field from a solution of the two-dimensional Laplace equation; the mass flux vector is then calculated from the pressure gradient. The means for incorporating this model into a lumped-parameter network analogy for porous-media flow is also given. The flow model shows tile-gap mass flux to be very sensitive to the gap width indicating a need for coupling the TPS flow and tile displacement calculations. Finally recommendations are made concerning additional analytical and experimental work to improve TPS flow predictions.

Dwoyer, D. L.↗

TPCPF: Three-Phase Continuation Power Flow Tool for Voltage Stability Assessment of Distribution Networks With Distributed Energy Resources

This article presents a three-phase unbalanced continuation power flow algorithm for voltage stability assessment of distribution systems with high penetration of distributed energy resources (DERs). Analyzing distribution system voltage stability with DER will allow high penetration of renewable energy necessary for the sustainability goals. The developed algorithm can analyze voltage stability for both the meshed and radial systems and the balanced and unbalanced three-phase distribution systems. The developed tool allows the voltage stability analysis to facilitate the planning, operation, control, and distribution system management. The impact of DER on the voltage stability of several test cases has been analyzed considering constant power (P Q) and regulated-voltage (P V ) modes of operation for DER units. Moreover, different voltage stability case studies are presented to demonstrate the impact of unbalance, load increment, and network topology on the maximum loading capacity. Finally, results using the IEEE 13-node feeder, the 18-bus balanced shipboard system, the 13-node CIGRE benchmark system, and the 136-bus redial distribution feeder demonstrate that the developed continuation power flow tool can efficiently perform voltage stability analysis for active distribution systems.

42 ENGINEERING↗

Analyzing critical material demand: A revised approach

Apparent consumption has been widely used as a metric to estimate material demand. However, with technology advancement and complexity of material use, this metric has become less useful in tracking material flows, estimating recycling feedstocks, and conducting life cycle analysis of critical materials. Here, we call for future research efforts to focus on building a multi-tiered consumption database for the global trade network of critical materials. This approach will help track how raw materials are processed into major components (e.g., motor assemblies) and eventually incorporated into complete pieces of equipment (e.g., wind turbines). Foreseeable challenges would involve: 1) difficulty in obtaining a comprehensive picture of trade partners due to business sensitive information, 2) complexity of materials going into components of a machine, and 3) maintaining such a database. We propose ways to address these challenges such as making use of digital design, learning from the experience of building other databases, and developing a strategy for financial sustainability. Additionally, we recommend that, with the advancement of information technology, small steps toward building such a database will contribute significantly to our understanding of material flows in our society and the associated human impacts on the environment.

54 ENVIRONMENTAL SCIENCES↗

Engine With Regression and Neural Network Approximators Designed

At the NASA Glenn Research Center, the NASA engine performance program (NEPP, ref. 1) and the design optimization testbed COMETBOARDS (ref. 2) with regression and neural network analysis-approximators have been coupled to obtain a preliminary engine design methodology. The solution to a high-bypass-ratio subsonic waverotor-topped turbofan engine, which is shown in the preceding figure, was obtained by the simulation depicted in the following figure. This engine is made of 16 components mounted on two shafts with 21 flow stations. The engine is designed for a flight envelope with 47 operating points. The design optimization utilized both neural network and regression approximations, along with the cascade strategy (ref. 3). The cascade used three algorithms in sequence: the method of feasible directions, the sequence of unconstrained minimizations technique, and sequential quadratic programming. The normalized optimum thrusts obtained by the three methods are shown in the following figure: the cascade algorithm with regression approximation is represented by a triangle, a circle is shown for the neural network solution, and a solid line indicates original NEPP results. The solutions obtained from both approximate methods lie within one standard deviation of the benchmark solution for each operating point. The simulation improved the maximum thrust by 5 percent. The performance of the linear regression and neural network methods as alternate engine analyzers was found to be satisfactory for the analysis and operation optimization of air-breathing propulsion engines (ref. 4).

Patnaik, Surya N.↗

Truck platooning in the U.S. national road network: A system-level modeling approach

Truck platooning enables a group of trucks to move close together, which helps reduce truck fuel use and increase effective road capacity. In this paper, a system-level equilibrium model is developed to characterize spontaneous truck platooning with coexistence of non-platooning vehicles in a network, by explicitly accounting for the interlocking relationship among platoon formation time, truck fuel saving, and increase in effective road capacity. To equilibrate the relationships, an algorithm is proposed which involves a diagonalization approach and a bush based algorithm to solve decomposed subproblems. The condition of proportionality is imposed to obtain unique traffic flows for each class of vehicles on road links. In addition, a spatially constrained multivariate clustering technique is employed to construct origin/destination zones that are smaller than the coarse Freight Analysis Framework (FAF) zones, while maintaining reasonable computational burden for network traffic assignment. Model implementation in the U.S. shows that platooning could lead to 7.9% fuel saving among platoonable trucks in 2025 and a comparable increase in effective capacity of platoonable road links, which would account for 60% of rural interstate roads. The fuel saving and road capacity improvement translate into an annual cost reduction of $\$$868 million for the U.S. intercity trucking sector and reduced road infrastructure investment needs worth $\$$4.8 billion. Extensive sensitivity analysis further reveals that fuel saving of platoonable trucks increases with platoon size but decreases with inter-truck distance in a platoon. Fuel saving potential suggests that priority should be given to rural rather than urban roads in deploying platooning technologies. As we expected, greater market penetration of platooning technologies means higher fuel saving and greater increase in effective road capacity.

33 ADVANCED PROPULSION SYSTEMS↗

Supercritical, liquid, and gas CO 2 reactive transport and carbonate formation in portland cement mortar

In this paper, we investigate carbonate formation and reactive transport rate in variably saturated portland cement mortars when high concentrations of gas, liquid, or supercritical CO 2 flow through their pore network. Xray computed tomography completed during CO 2 flow is used to quantify the microstructural evolution as the mortar carbonates. After in situ tests, higher resolution scans, thermogravimetric analysis, and desorption isotherm analysis are performed to further quantify microstructural changes. We found that at dry conditions supercritical CO 2 moves more rapidly through the pore space and precipitates more carbonates than liquid or gas CO 2 . However, at 50% degree of saturation (DOS) the CO 2 state did not affect the rate of transport in that each specimen exposed to a different CO 2 state carbonated within the first hour of CO 2 exposure. When the pore space is at 50 or 100% DOS, supercritical CO 2 did not react with hydration products more rapidly nor did it result in more carbonate formation during exposure compared to gas or liquid CO 2 . The amount of Ca(OH) 2 that contributes to CaCO 3 formation is correlated to the DOS. For the mortar composition analyzed, Ca(OH) 2 contributes to approximately 40% of the carbonates formed in the 50% DOS specimens and 15% in the 100% DOS specimens. In other words, as the amount of moisture in the pore space increases, phases other than Ca(OH) 2 contribute to more than 50% of the total CaCO 3 formed.

42 ENGINEERING↗

Steel Creek, Pen Branch, and D-Area Watershed Stream Gauging Stations

A network of stream gauging systems were installed in the Steel Creek, Pen Branch, D-Area Discharge Canal, and the D006 Stream in support of the groundwater modeling efforts for the P-Area Groundwater Operable Unit (OU); Chemical, Metals, and Pesticides (CMP) Pits OU; and the D-Area Watershed, respectively. Each location is monitored by a MACE Floseries3 FloPro data logger and a MACE doppler ultrasonic area/velocity sensor. Each stream gauging system is powered by an internal 12-volt battery supplied by a solar panel with a trickle charger. Information collected by each data logger is logged internally and telecommunicated via a cellular network to an online server for real time analysis and monitoring. The MACE doppler ultrasonic area/velocity sensor can measure stream depth and velocities to give output values of flow rates, total flow, net flow, and volumes. The water depth is measured by a ceramic pressure transducer located on the top of the sensor. The velocity is measured by a continuous wave doppler sensor to give an average velocity across the whole stream profile. This report discusses the equipment and methods used to install continuous stream gauging stations and provides a summary of data collected through FY2025.

54 ENVIRONMENTAL SCIENCES↗

Evaluation of Graph Analytics Frameworks Using the GAP Benchmark Suite

The analysis of connected data is an increasingly important application in high-performance computing. Such analyses can reveal fraudulent patterns in financial transactions, optimize telecommunications networks, predict information flow in social networks, etc. However, the landscape of graph analytics is highly diverse. Graph algorithms stress processor architectures differently, and no one graph can represent all topologies. Consequently, no single approach or framework is expected to be optimal for all graph analytics problems. To help make sense of this diverse landscape, we evaluated four approaches to graph analytics: GraphBLAS, Galois, BGL17, GraphIt; and compare them against hand-tuned implementations that take advantage of hardware features on our test platform. Graph- BLAS formulates graph analytics as sparse linear algebra. Galois provides syntactic constructs for data parallelism over irregular data structures. BGL17 is a generic C++ template library for implementing graph algorithms. GraphIt provides a domain- specific language to describe and optimize graph algorithms. We use the GAP Benchmark Suite to establish baseline performance and guide the side-by-side evaluation of each framework. GAP consists of 30 tests: six graph analytics algorithms (breadth- first search, single-source shortest path, PageRank, betweenness centrality, connected components, and triangle counting) run on five graphs, each with different topological characteristics (e.g., high diameter, skewed degree distribution, high average degree). High-performance reference implementations are included for each benchmark algorithm. Because a graph can be loaded into memory a number of ways (e.g., flat file on disk, compressed sparse format, data frames, retrieved from SQL or NoSQL databases), our evaluation focused on computational performance rather than I/O. Our results show the relative strengths of each framework.

Graph algorithms, Benchmarking, shared-memory prog↗

An artificial neural network framework for reduced order modeling of transient flows

Here, this paper proposes a supervised machine learning framework for the non-intrusive model order reduction of unsteady fluid flows to provide accurate predictions of non-stationary state variables when the control parameter values vary. Our approach utilizes a training process from full-order scale direct numerical simulation data projected on proper orthogonal decomposition (POD) modes to achieve an artificial neural network (ANN) model with reduced memory requirements. This data-driven ANN framework allows for a nonlinear time evolution of the modal coefficients without performing a Galerkin projection. Our POD-ANN framework can thus be considered an equation-free approach for latent space dynamics evolution of nonlinear transient systems and can be applied to a wide range of physical and engineering applications. Within this framework we introduce two architectures, namely sequential network (SN) and residual network (RN), to train the trajectory of modal coefficients. We perform a systematic analysis of the performance of the proposed reduced order modeling approaches on prediction of a nonlinear wave-propagation problem governed by the viscous Burgers equation, a simplified prototype setting for transient flows. We find that the POD-ANN-RN yields stable and accurate results for test problems assessed both within inside and outside of the database range and performs significantly better than the standard intrusive Galerkin projection model. Finally, our results show that the proposed framework provides a non-intrusive alternative to the evolution of transient physics in a POD basis spanned space, and can be used as a robust predictive model order reduction tool for nonlinear dynamical systems.

42 ENGINEERING↗

Throughput Measurements and Profile Analysis of Cloud Networks

Cloud networks utilize virtual connections to connect virtual machines distributed across cloud sites. They are increasingly deployed due to flexible provisioning using software and cost-effectiveness in not requiring to build physical network infrastructure. However, their extensive virtualization makes it unclear how well the established practices of conventional networks translate to them. Here, we study throughput measurements over a Google Cloud network using a matching hardware emulated conventional network, which provide production and exploratory conditions, respectively. The measurements span connections representing local, cross-continental and around the Earth distances. We study the effects of parallel flows, congestion control algorithms and retransmissions on the network throughput profile expressed as a function of RTT. We compare the throughput profile of Google Cloud network with those of emulated network under various loss conditions, including those too disruptive or expensive in the former. Our analysis based on the concave-convex shape and utilization-concavity coefficients of throughput profiles indicates an overall agreement of performance between the two networks, thereby justifying the use of conventional network emulations to analyze cloud networks. In terms of practical use, our study establishes that BBR and BBRv2 alpha TCP achieve higher throughput compared to loss-based congestion control algorithms under most network configurations, especially, under losses at large RTT.

Phanekham, Derek [Southern Methodist Univ., Dallas↗

An automated workflow that generates atom mappings for large‐scale metabolic models and its application to Arabidopsis thaliana

SUMMARY Quantification of reaction fluxes of metabolic networks can help us understand how the integration of different metabolic pathways determines cellular functions. Yet, intracellular fluxes cannot be measured directly but are estimated with metabolic flux analysis (MFA), which relies on the patterns of isotope labeling of metabolites in the network. The application of MFA also requires a stoichiometric model with atom mappings that are currently not available for the majority of large‐scale metabolic network models, particularly of plants. While automated approaches such as the Reaction Decoder Toolkit (RDT) can produce atom mappings for individual reactions, tracing the flow of individual atoms of the entire reactions across a metabolic model remains challenging. Here we establish an automated workflow to obtain reliable atom mappings for large‐scale metabolic models by refining the outcome of RDT, and apply the workflow to metabolic models of Arabidopsis thaliana . We demonstrate the accuracy of RDT through a comparative analysis with atom mappings from a large database of biochemical reactions, MetaCyc. We further show the utility of our automated workflow by simulating 15 N isotope enrichment and identifying nitrogen (N)‐containing metabolites which show enrichment patterns that are informative for flux estimation in future 15 N‐MFA studies of A. thaliana . The automated workflow established in this study can be readily expanded to other species for which metabolic models have been established and the resulting atom mappings will facilitate MFA and graph‐theoretic structural analyses with large‐scale metabolic networks.

59 BASIC BIOLOGICAL SCIENCES↗