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Search indexed NASA NTRS and DOE OSTI research on propulsion, heat transfer, battery materials and energy systems. Follow report and document links to the original sources.

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At least 217 records · Page 12

Coupled X-ray Fluorescence and X-ray Absorption Spectroscopy for Microscale Imaging and Identification of Sulfur Species within Tissues and Skeletons of Scleractinian Corals

Identifying and mapping the wide range of sulfur species within complex matrices presents a challenge for understanding the distribution of these important biomolecules within environmental and biological systems. Here, we present a coupled micro X-ray fluorescence (μXRF) and X-ray absorption near-edge structure (XANES) spectroscopy method for determining the presence of specific sulfur species in coral tissues and skeletons at high spatial resolution. By using multiple energy stacks and principal component analysis of a large spectral database, we were able to more accurately identify sulfur species components and distinguish different species and distributions of sulfur formerly unresolved by previous studies. Specifically, coral tissues were dominated by more reduced sulfur species, such as glutathione disulfide, cysteine, and sulfoxide, as well as organic sulfate as represented by chondroitin sulfate. Sulfoxide distributions were visually correlated with the presence of zooxanthellae endosymbionts. Coral skeletons were composed primarily of carbonate-associated sulfate (CAS) along with minor contributions from organic sulfate and a separate inorganic sulfate likely in the form of adsorbed sulfate. In conclusion, this coupled XRF-XANES approach allows for a more accurate and informative view of sulfur within biological systems in situ and holds great promise for pairing with other techniques to allow for a more encompassing understanding of elemental distributions within the environment.

54 ENVIRONMENTAL SCIENCES↗

Intense windstorms in the northeastern United States

Abstract. Windstorms are a major natural hazard in many countries. The objective of this study is to identify and characterize intense windstorms during the last 4 decades in the US Northeast and determine both the sources of cyclones responsible for these events and the manner in which those cyclones differ from the cyclone climatology. The windstorm detection is based on the spatial extent of locally extreme wind speeds at 100 m height from the ERA5 reanalysis database. During the top 10 windstorms, wind speeds exceed their local 99.9th percentile over at least one-third of land-based ERA5 grid cells in this high-population-density region of the USA. Maximum sustained wind speeds at 100 m during these windstorms range from 26 to over 43 ms−1, with wind speed return periods exceeding 6.5 to 106 years (considering the top 5 % of grid cells during each storm). Property damage associated with these storms, with inflation adjusted to January 2020, ranges from USD 24 million to over USD 29 billion. Two of these windstorms are linked to decaying tropical cyclones, three are Alberta clippers, and the remaining storms are Colorado lows. Two of the 10 re-intensified off the east coast, leading to development of nor'easters. These windstorms followed frequently observed cyclone tracks but exhibit maximum intensities as measured using 700 hPa relative vorticity and mean sea level pressure that is 5–10 times the mean values for cyclones that followed similar tracks over this 40-year period. The time evolution of wind speeds and concurrent precipitation for those windstorms that occurred after the year 2000 exhibit good agreement with in situ ground-based and remote sensing observations, plus storm damage reports, indicating that the ERA5 reanalysis data have a high degree of fidelity for large, damaging windstorms such as these. A larger pool of the top 50 largest windstorms exhibit evidence of only weak serial clustering, which is in contrast to the relatively strong serial clustering of windstorms in Europe.

58 GEOSCIENCES↗

Digital Astronaut Photography: A Discovery Dataset for Archaeology

Astronaut photography acquired from the International Space Station (ISS) using commercial off-the-shelf cameras offers a freely-accessible source for high to very high resolution (4-20 m/pixel) visible-wavelength digital data of Earth. Since ISS Expedition 1 in 2000, over 373,000 images of the Earth-Moon system (including land surface, ocean, atmospheric, and lunar images) have been added to the Gateway to Astronaut Photography of Earth online database (http://eol.jsc.nasa.gov ). Handheld astronaut photographs vary in look angle, time of acquisition, solar illumination, and spatial resolution. These attributes of digital astronaut photography result from a unique combination of ISS orbital dynamics, mission operations, camera systems, and the individual skills of the astronaut. The variable nature of astronaut photography makes the dataset uniquely useful for archaeological applications in comparison with more traditional nadir-viewing multispectral datasets acquired from unmanned orbital platforms. For example, surface features such as trenches, walls, ruins, urban patterns, and vegetation clearing and regrowth patterns may be accentuated by low sun angles and oblique viewing conditions (Fig. 1). High spatial resolution digital astronaut photographs can also be used with sophisticated land cover classification and spatial analysis approaches like Object Based Image Analysis, increasing the potential for use in archaeological characterization of landscapes and specific sites.

Stefanov, William L.↗

A Real-Time MODIS Vegetation Composite for Land Surface Models and Short-Term Forecasting

The NASA Short-term Prediction Research and Transition (SPoRT) Center is producing real-time, 1- km resolution Normalized Difference Vegetation Index (NDVI) gridded composites over a Continental U.S. domain. These composites are updated daily based on swath data from the Moderate Resolution Imaging Spectroradiometer (MODIS) sensor aboard the polar orbiting NASA Aqua and Terra satellites, with a product time lag of about one day. A simple time-weighting algorithm is applied to the NDVI swath data that queries the previous 20 days of data to ensure a continuous grid of data populated at all pixels. The daily composites exhibited good continuity both spatially and temporally during June and July 2010. The composites also nicely depicted high greenness anomalies that resulted from significant rainfall over southwestern Texas, Mexico, and New Mexico during July due to early-season tropical cyclone activity. The SPoRT Center is in the process of computing greenness vegetation fraction (GVF) composites from the MODIS NDVI data at the same spatial and temporal resolution for use in the NASA Land Information System (LIS). The new daily GVF dataset would replace the monthly climatological GVF database (based on Advanced Very High Resolution Radiometer [AVHRR] observations from 1992-93) currently available to the Noah land surface model (LSM) in both LIS and the public version of the Weather Research and Forecasting (WRF) model. The much higher spatial resolution (1 km versus 0.15 degree) and daily updates based on real-time satellite observations have the capability to greatly improve the simulation of the surface energy budget in the Noah LSM within LIS and WRF. Once code is developed in LIS to incorporate the daily updated GVFs, the SPoRT Center will conduct simulation sensitivity experiments to quantify the impacts and improvements realized by the MODIS real-time GVF data. This presentation will describe the methodology used to develop the 1-km MODIS NDVI composites and show sample output from summer 2010, compare the MODIS GVF data to the AVHRR monthly climatology, and illustrate the sensitivity of the Noah LSM within LIS and/or the coupled LIS/WRF system to the new MODIS GVF dataset.

Case, Jonathan L.↗

Satellite Observations and Modeling to Understand the Lower Mekong River Basin Streamflow Variability

In this work, we have used the Soil & Water Assessment Tool (SWAT) to examine streamflow variability of the Lower Mekong River Basin (LMRB) associated with changes in the Upper Mekong River Basin (UMRB) inflows. Two hypothetical experiments were formulated and evaluated for the LMRB, where we conducted runoff simulations with multiple inflow changes that include upstream runoff yield increase and decrease scenarios. Streamflow variability of the LMRB was quantified by two streamflow metrics that explain flow variability and predictability, and high flow disturbance. The model experiments were performed for the Lower Mekong River Basin with identical climate, soil, and other watershed characteristics data. Remote sensing precipitation (Tropical Rainfall Measurement Mission, TRMM, and Global Precipitation Measurement mission, GPM), meteorological data as well as spatial data that include a digital elevation model, newly developed soil information (Harmonized World Soil Database, HWSD), and land use and land cover were processed as input to the LMRB model simulations. Observed daily streamflow data along the Lower Mekong River from Chiang Sean, Thailand to Kratie, Cambodia were used for calibration and validation. Our work results suggest that the Lower Mekong River streamflow is highly variable and has a low predictability (Colwell index of about 32%). We found that releasing more water from upstream Mekong during rainfall months by 30% would result in a reduction in the Lower Mekong streamflow predictability by about 21%. This reduction in predictability is mainly attributed to a decrease in the Contingency index. Our work shows that the ability to predict floods/droughts at the Lower Mekong River would be reduced if there is any anticipated change (i.e., increase/decrease) from UMRB releases. Our results also show that releasing more flows from the upstream Mekong would also affect flood duration and the frequency of flood occurrences downstream. The results of this work thus help to quantify the sensitivity of streamflow variability at the Lower Mekong River Basin to upstream anthropogenic changes.

Streamflow Predictability↗

Digital cartography of the planets - New methods, its status, and its future

A system has been developed that establishes a standardized cartographic database for each of the 19 planets and major satellites that have been explored to date. Compilation of the databases involves both traditional and newly developed digital image processing and mosaicking techniques, including radiometric and geometric corrections of the images. Each database, or digital image model (DIM), is a digital mosaic of spacecraft images that have been radiometrically and geometrically corrected and photometrically modeled. During compilation, ancillary data files such as radiometric calibrations and refined photometric values for all camera lens and filter combinations and refined camera-orientation matrices for all images used in the mapping are produced. The system is designed to aid in the following: access to and utilization of spatial data returned by planetary spacecraft; coregistration of cartographic image and topographic elevation models with geological, geophysical, and geochemical databases; and the design and preparation of both standard and custom map products. A major goal of the project is to publish the DIMs on compact computer-compatible media such as digital-optical (CD-ROM) disks.

Batson, R. M.↗

Spatial top-down proteomics for the functional characterization of human kidney

Background: The Human Proteome Project has credibly detected nearly 93% of the roughly 20,000 proteins which are predicted by the human genome. However, the proteome is enigmatic, where alterations in amino acid sequences from polymorphisms and alternative splicing, errors in translation, and post-translational modifications result in a proteome depth estimated at several million unique proteoforms. Recently mass spectrometry has been demonstrated in several landmark efforts mapping the human proteoform landscape in bulk analyses. Herein, we developed an integrated workflow for characterizing proteoforms from human tissue in a spatially resolved manner by coupling laser capture microdissection, nanoliter-scale sample preparation, and mass spectrometry imaging. Results: Using healthy human kidney sections as the case study, we focused our analyses on the major functional tissue units including glomeruli, tubules, and medullary rays. After laser capture microdissection, these isolated functional tissue units were processed with microPOTS (microdroplet processing in one-pot for trace samples) for sensitive top-down proteomics measurement. This provided a quantitative database of 616 proteoforms that was further leveraged as a library for mass spectrometry imaging with near-cellular spatial resolution over the entire section. Notably, several mitochondrial proteoforms were found to be differentially abundant between glomeruli and convoluted tubules, and further spatial contextualization was provided by mass spectrometry imaging confirming unique differences identified by microPOTS, and further expanding the field-of-view for unique distributions such as enhanced abundance of a truncated form (1-74) of ubiquitin within cortical regions. Conclusions: We developed an integrated workflow to directly identify proteoforms and reveal their spatial distributions. Where of the 20 differentially abundant proteoforms identified as discriminate between tubules and glomeruli by microPOTS, the vast majority of tubular proteoforms were of mitochondrial origin (8 of 10) where discriminate proteoforms in glomeruli were primarily hemoglobin subunits (9 of 10). These trends were also identified within ion images demonstrating spatially resolved characterization of proteoforms that has the potential to reshape discovery-based proteomics because the proteoforms are the ultimate effector of cellular functions. Applications of this technology have the potential to unravel etiology and pathophysiology of disease states, informing on biologically active proteoforms, which remodel the proteomic landscape in chronic and acute disorders.

59 BASIC BIOLOGICAL SCIENCES↗

HodDB: Design and Analysis of a Query Processor for Brick.

Brick is a recently proposed metadata schema and ontology for describing building components and the relationships between them. It represents buildings as directed labeled graphs using the RDF data model. Using the SPARQL query language, building-agnostic applications query a Brick graph to discover the set of resources and relationships they require to operate. Latency-sensitive applications, such as user interfaces, demand response and modelpredictive control, require fast queries — conventionally less than 100ms. We benchmark a set of popular open-source and commercial SPARQL databases against three real Brick models using seven application queries and find that none of them meet this performance target. This lack of performance can be attributed to design decisions that optimize for queries over large graphs consisting of billions of triples, but give poor spatial locality and join performance on the small dense graphs typical of Brick. We present the design and evaluation of HodDB, a RDF/SPARQL database for Brick built over a node-based index structure. HodDB performs Brick queries 3-700x faster than leading SPARQL databases and consistently meets the 100ms threshold, enabling the portability of important latency-sensitive building applications.

32 ENERGY CONSERVATION, CONSUMPTION, AND UTILIZATI↗

CHUWD-H v1.0: a comprehensive historical hourly weather database for U.S. urban energy system modeling

Reliable and continuous meteorological data are crucial for modeling the responses of energy systems and their components to weather and climate conditions, particularly in densely populated urban areas. However, existing long-term datasets often suffer from spatial and temporal gaps and inconsistencies, posing great challenges for detailed urban energy system modeling and cross-city comparison under realistic weather conditions. Here we introduce the Historical Comprehensive Hourly Urban Weather Database (CHUWD-H) v1.0, a 23-year (1998-2020) gap-free and quality-controlled hourly weather dataset covering 550 weather station locations across all urban areas in the contiguous United States. CHUWD-H v1.0 synthesizes hourly weather observations from stations with outputs from a physics-based solar radiation model and a reanalysis dataset through a multi-step gap filling approach. A 10-fold Monte Carlo cross-validation suggests that the accuracy of this gap filling approach surpasses that of conventional gap filling methods. Designed primarily for urban energy system modeling, CHUWD-H v1.0 should also support historical urban meteorological and climate studies, including the validation and evaluation of urban climate modeling.

54 ENVIRONMENTAL SCIENCES↗

A systematic review and evaluation of Zika virus forecasting and prediction research during a public health emergency of international concern

Researchers published many studies which sought to predict and forecast important features of Zika virus (ZIKV) infections and their spread during the 2016–2017 ZIKV pandemic. We conducted a comprehensive review of such ZIKV prediction studies and evaluated their aims, the data sources they used, which methods were used, how timely they were published, and whether they provided sufficient information to be used or reproduced by others. Of the 73 studies evaluated, we found the accessibility, reproducibility, timeliness, and incorporation of uncertainty in these published predictions varied; indicating there is substantial room for improvement. We identified that the release of study findings before formal journal publication (‘pre-prints’) increased the timeliness of Zika prediction studies, but note they were infrequently used during this public health emergency. Addressing these areas can improve our understanding of Zika and other outbreaks and ensure forecasts can inform preparedness and response to future outbreaks, epidemics, and pandemics.

59 BASIC BIOLOGICAL SCIENCES↗

naturf: a package for generating urban parameters for numerical weather modeling

The Neighborhood Adaptive Tissues for Urban Resilience Futures tool (NATURF) is a Python workflow that generates files readable by the Weather Research and Forecasting (WRF) model. NATURF uses geopandas and hamilton to calculate 132 building parameters from shapefiles with building footprint and height information. These parameters can be collected and used in many formats, and the primary output is a binary file configured for input to WRF. This workflow is a flexible adaptation of the National/World Urban Database and Access Portal Tool (NUDAPT/WUDAPT) that can be used with any study area at any spatial resolution. The climate modeling community and urban planners can identify the effects of building/neighborhood morphology on the microclimate using the urban parameters and WRF-readable files produced by NATURF. More information on the urban parameters calculated can be found in the documentation.

54 ENVIRONMENTAL SCIENCES↗

Utilizing Ontology Structures To Curate the DOE-NETL Carbon Storage Open Database

The specialized ontology for the Carbon Storage Open Database will enable more rapid assignment of appropriate symbology standards for visualization improvements, optimize topical and spatial tagging within keywords, and improve flexibility for utilization in existing data repositories such as EDX. This effort also aims to establish a foundation for utilization of ontologies for organization of other data related to geologic carbon storage in the future.

Martin, Abigail↗

ELM2.1-XGBfire1.0: improving wildfire prediction by integrating a machine learning fire model in a land surface model

Wildfires have shown increasing trends in both frequency and severity across the contiguous United States (CONUS). However, process-based fire models have difficulties in accurately simulating the burned area over the CONUS due to a simplification of the physical process and cannot capture the interplay among fire, ignition, climate, and human activities. The deficiency of burned area simulation deteriorates the description of fire impact on energy balance, water budget, and carbon fluxes in the Earth system models (ESMs). Alternatively, fire models based on machine learning (ML), which capture statistical relationships between the burned area and environmental factors, have shown promising burned area predictions and corresponding fire impact simulation. We develop a hybrid framework (ELM2.1-XGBFire1.0) that integrates an eXtreme Gradient Boosting (XGBoost) wildfire model with the Energy Exascale Earth System Model (E3SM) land model (ELM) version 2.1. A Fortran–C–Python deep learning bridge is adapted to support online communication between ELM and the ML fire model. Specifically, the burned area predicted by the ML-based wildfire model is directly passed to ELM to adjust the carbon pool and vegetation dynamics after disturbance, which are then used as predictors in the ML-based fire model in the next time step. Evaluated against the historical burned area from Global Fire Emissions Database 5 from 2001–2019, the ELM2.1-XGBFire1.0 outperforms process-based fire models in terms of spatial distribution and seasonal variations. The ELM2.1-XGBFire1.0 has proven to be a new tool for studying vegetation–fire interactions and, more importantly, enables seamless exploration of climate–fire feedback, working as an active component of E3SM.

54 ENVIRONMENTAL SCIENCES↗

The photo-colorimetric space as a medium for the representation of spatial data

Spatial displays and instruments are usually used in the context of vehicle guidance, but it is hard to find applicable spatial formats in information retrieval and interaction systems. Human interaction with spatial data structures and the applicability of the CIE color space to improve dialogue transparency is discussed. A proposal is made to use the color space to code spatially represented data. The semantic distances of the categories of dialogue structures or, more general, of database structures, are determined empirically. Subsequently the distances are transformed and depicted into the color space. The concept is demonstrated for a car diagnosis system, where the category cooling system could, e.g., be coded in blue, the category ignition system in red. Hereby a correspondence between color and semantic distances is achieved. Subcategories can be coded as luminance differences within the color space.

Kraiss, K. Friedrich↗

The Transfer Function Model as a Tool to Study and Describe Space Weather Phenomena

The Transfer Function Model (TFM) is a semi-analytical, linear model that is designed especially to describe thermospheric perturbations associated with magnetic storms and substorm. activity. It is a multi-constituent model (N2, O, He H, Ar) that accounts for wind induced diffusion, which significantly affects not only the composition and mass density but also the temperature and wind fields. Because the TFM adopts a semianalytic approach in which the geometry and temporal dependencies of the driving sources are removed through the use of height-integrated Green's functions, it provides physical insight into the essential properties of processes being considered, which are uncluttered by the accidental complexities that arise from particular source geometrie and time dependences. Extending from the ground to 700 km, the TFM eliminates spurious effects due to arbitrarily chosen boundary conditions. A database of transfer functions, computed only once, can be used to synthesize a wide range of spatial and temporal sources dependencies. The response synthesis can be performed quickly in real-time using only limited computing capabilities. These features make the TFM unique among global dynamical models. Given these desirable properties, a version of the TFM has been developed for personal computers (PC) using advanced platform-independent 3D visualization capabilities. We demonstrate the model capabilities with simulations for different auroral sources, including the response of ducted gravity waves modes that propagate around the globe. The thermospheric response is found to depend strongly on the spatial and temporal frequency spectra of the storm. Such varied behavior is difficult to describe in statistical empirical models. To improve the capability of space weather prediction, the TFM thus could be grafted naturally onto existing statistical models using data assimilation.

Porter, Hayden S.↗

A Synthesis of Light Absorption Properties of the Arctic Ocean: Application to Semi-analytical Estimates of Dissolved Organic Carbon Concentrations from Space

The light absorption coefficients of particulate and dissolved materials are the main factors determining the light propagation of the visible part of the spectrum and are, thus, important for developing ocean color algorithms. While these absorption properties have recently been documented by a few studies for the Arctic Ocean [e.g., Matsuoka et al., 2007, 2011; Ben Mustapha et al., 2012], the datasets used in the literature were sparse and individually insufficient to draw a general view of the basin-wide spatial and temporal variations in absorption. To achieve such a task, we built a large absorption database at the pan-Arctic scale by pooling the majority of published datasets and merging new datasets. Our results showed that the total non-water absorption coefficients measured in the Eastern Arctic Ocean (EAO; Siberian side) are significantly higher 74 than in the Western Arctic Ocean (WAO; North American side). This higher absorption is explained 75 by higher concentration of colored dissolved organic matter (CDOM) in watersheds on the Siberian 76 side, which contains a large amount of dissolved organic carbon (DOC) compared to waters off 77 North America. In contrast, the relationship between the phytoplankton absorption (a()) and chlorophyll a (chl a) concentration in the EAO was not significantly different from that in the WAO. Because our semi-analytical CDOM absorption algorithm is based on chl a-specific a() values [Matsuoka et al., 2013], this result indirectly suggests that CDOM absorption can be appropriately erived not only for the WAO but also for the EAO using ocean color data. Derived CDOM absorption values were reasonable compared to in situ measurements. By combining this algorithm with empirical DOC versus CDOM relationships, a semi-analytical algorithm for estimating DOC concentrations for coastal waters at the Pan-Arctic scale is presented and applied to satellite ocean color data.

Pan-Arctic↗

Comparison of MODIS Land Surface Temperature and Air Temperature over the Continental USA Meteorological Stations

The National Land Cover Database (NLCD) Impervious Surface Area (ISA) and MODIS Land Surface Temperature (LST) are used in a spatial analysis to assess the surface-temperature-based urban heat island's (UHIS) signature on LST amplitude over the continental USA and to make comparisons to local air temperatures. Air-temperature-based UHIs (UHIA), calculated using the Global Historical Climatology Network (GHCN) daily air temperatures, are compared with UHIS for urban areas in different biomes during different seasons. NLCD ISA is used to define urban and rural temperatures and to stratify the sampling for LST and air temperatures. We find that the MODIS LST agrees well with observed air temperature during the nighttime, but tends to overestimate it during the daytime, especially during summer and in nonforested areas. The minimum air temperature analyses show that UHIs in forests have an average UHIA of 1 C during the summer. The UHIS, calculated from nighttime LST, has similar magnitude of 1-2 C. By contrast, the LSTs show a midday summer UHIS of 3-4 C for cities in forests, whereas the average summer UHIA calculated from maximum air temperature is close to 0 C. In addition, the LSTs and air temperatures difference between 2006 and 2011 are in agreement, albeit with different magnitude.

Land Surface Temperature↗