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At least 217 records · Page 12

Numerical simulations of counterstreaming plasmas and their relevance to interhemispheric flows

The collisionless expansion of counterstreaming plasmas has been studied in order to elucidate the basic physical processes that may be operating during the initial refilling of depleted flux tubes after a magnetic storm. The numerical technique applied is briefly described, and simulation results are presented. The simulation geometry consisted of two high-density H(+)-O(+) electron plasmas separated by a low-density H(+)-electron plasma. The temporal evolution of the expanding plasmas and the electostatic potential in the region between the two sources is described. The main interacting streams are found to be stable with respect to both the ion acoustic and ion cyclotron modes and only the suprathermal forerunner ions are unstable with respect to the ion cyclotron mode. The results also suggest that a localized potential hill can form at the equator and that this potential hill can play an important role in the subsequent trapping and thermalization of the ion streams.

Singh, N.↗

Transonic Lift and Drag Predictions using Wall Modelled Large Eddy Simulations

Wall-modelled Large Eddy Simulations (WMLES) of the NASA Common Research Model (CRM) at transonic conditions and various angles of attacks leading up to and including shock-induced flow separation are performed using the LAVA computational framework. The simulations are shown to accurately predict the lift curve slope and the onset of separation characterized by the break in the pitching moment. Furthermore, careful assessment of skin-friction drag at cruise condition and its subsequent decrease with increasing angles of attack are shown to be in agreement with viscous sublayer resolving Reynolds Averaged Navier Stokes(RANS) simulations. The small differences between WMLES and RANS appear to be of the same order as differences seen between two RANS models at the cruise-point. Some sensitivity is observed to the coefficient used in the subgrid scale model, although this can be reconciled by noting the low chord- and shock-incidence Reynolds numbers (Rex≈106) seen in the outboard regions of the wing, along with the uncertainties associated with tripping and the numerical transition that occurs near the leading edge. Among the primary drawbacks seen in the WMLES predictions is the subdued increase in wave-drag with increasing angle-of-attack and the shock intensity when compared with experimental data. Preliminary assessment suggests that additional span- and stream-wise grid resolution is likely needed in mid- and out-board portions of the wing to better resolve the shock-induced separated flow and to further investigate prediction accuracy of unsteady temporal characteristics of the problem.

ARMD↗

Modeling the Prompt Optical Emission of GRB 180325A: The Evolution of a Spike from the Optical to Gamma Rays

The transition from prompt to afterglow emission is one of the most exciting and least understood phases in gamma-ray bursts (GRBs). Correlations among optical, X-ray, and gamma-ray emission in GRBs have been explored, to attempt to answer whether the earliest optical emission comes from internal and/or external shocks. We present optical photometric observations of GRB 180325A collected with the TAROT and RATIR ground-based telescopes. These observations show two strong optical flashes with separate peaks at ∼50 and ∼120 s, followed by a temporally extended optical emission. We also present X-rays and gamma-ray observations of GRB 180325A, detected by the Burst Alert Telescope and X-ray Telescope, on the Neil Gehrels Swift observatory, which both observed a narrow flash at ∼80 s. We show that the prompt gamma-ray and X-ray early emission shares similar temporal and spectral features consistent with internal dissipation within the relativistic outflow (e.g., by internal shocks or magnetic reconnection), while the early optical flashes are likely generated by the reverse shock that decelerates the ejecta as it sweeps up the external medium.

R. L. Becerra↗

Improving Chirped Fiber Bragg Grating Resolution for Position-Sensitive Sensors in Shock- and Detonation-Driven Experiments

Chirped fiber Bragg gratings (CFBGs) are robust diagnostic sensors that are widely used to track detonation-driven and shock wave propagation. CFBGs are inscribed with a linearly chirped periodic index of refraction changes that alter the Bragg wavelength along the length of the probe. The light return of each individual Bragg element is captured by a detector at a unique time to map the full reflected spectrum. The CFBG spectrum is measured with a dispersive Fourier transform of the reflected light that temporally stretches the spectrum to increase spatial resolution and make a one-to-one map of the wavelength on a time axis. Here, we propose an improvement of CFBG temporal resolution by incorporating two co-linear laser pulses with orthogonal polarization states and a 5 ns time offset. The two separate signals were split and tracked by two separate detectors. An oscilloscope captured good separation in the signals, and two separate spectrograms were generated and interleaved in the post-processing of the data. This novel technique doubled the CFBG temporal resolution and led to a doubled location resolution. As a proof-of-concept of this technique, the resolution improvement was compared between standard CFBG measurements and the two polarization states method on a position-sensitive CFBG sensor. CFBG resolution doubling will advance sensor capabilities and will have a direct impact on improving capture and analysis in dynamic, high-explosive experiments.

42 ENGINEERING↗

Surface plasmon polariton pulse shaping via two-dimensional Bragg grating pairs

Abstract We demonstrate control over the spatial and temporal properties of surface plasmon polaritons (SPPs) launched from nanohole arrays in silver. The arrays provide wave vector matching to allow the conversion of free-space photons into counter-propagating SPPs. SPPs launched from multiple arrays interfere at well-defined spatial positions, and the interference fringes form an all-SPP periodic nano-optical grating which evolves in space and time as the SPPs propagate. The spatio-temporal characteristics of the optical grating can be tuned through various nanohole array parameters such as tilt angle, separation, and array width. In addition, we examine multiperiodic arrays (MPAs) consisting of arrays with different pitches placed adjacent to one another. This platform allows the temporal interference of SPPs with different central wavelengths to be tailored through the MPA geometric and structural parameters. The temporal interference serves as an encoded signal, whereby the frequency components can be controlled by the array properties.

79 ASTRONOMY AND ASTROPHYSICS↗

The structure of lightning flashes HF-UHF: 12 September 1975, Atlanta, Georgia

Simultaneous measurement of sferics at 3, 30, 139, and 295 MHz were made during thunderstorms. Wideband electronics and an analogue tape recorder continuously recorded the radiation from lightning with about 300 kHz of bandwidth. The data were obtained during the passage of a cold front. Flashing rate, burst rate and the structure of individual flashes were recorded. The record of a typical flash begins with a sudden burst of closely spaced pulses whose temporal structure is typical of the stepped leader, and ends in a large pulse suggestive of a first return stroke. The remainder of the flash consists of a sequence of pulses of varying amplitude separated by quiet periods of the order of milliseconds. The shape of these pulses and the temporal structure suggest that the first few large pulses are return strokes. Other discharges begin with widely spaced discrete pulses and resemble the preceding discharge less the leader and return stroke phase. The radiation exhibits a similar structure, at each of the frequencies monitored.

Levine, D. M.↗

Identifying Different Classes of Seismic Noise Signals Using Unsupervised Learning

Abstract Proper classification of nontectonic seismic signals is critical for detecting microearthquakes and developing an improved understanding of ongoing weak ground motions. We use unsupervised machine learning to label five classes of nonstationary seismic noise common in continuous waveforms. Temporal and spectral features describing the data are clustered to identify separable types of emergent and impulsive waveforms. The trained clustering model is used to classify every 1 s of continuous seismic records from a dense seismic array with 10–30 m station spacing. We show that dominate noise signals can be highly localized and vary on length scales of hundreds of meters. The methodology demonstrates the complexity of weak ground motions and improves the standard of analyzing seismic waveforms with a low signal‐to‐noise ratio. Application of this technique will improve the ability to detect genuine microseismic events in noisy environments where seismic sensors record earthquake‐like signals originating from nontectonic sources.

Johnson, Christopher W.↗

Magnetospheric electrostatic emissions and cold plasma densities

A synoptic study of electric wave, magnetometer, and plasma data from IMP-6 was carried out for times when banded electrostatic waves are observed between harmonics of the electron gyrofrequency in the earth's outer magnetosphere. Four separate classes of such waves were previously identified. The spatial and temporal occurrences of waves in each class are summarized here, as are correlations of occurrence with geomagnetic activity. Most importantly, associations between the observations of waves of different classes and the relative portions of cold and hot electrons present at the position of the spacecraft are established. Finally, evidence for the signature of the loss cone is sought in the plasma data.

Hubbard, R. F.↗

Time scales of pattern evolution from cross-spectrum analysis of advanced very high resolution radiometer and coastal zone color scanner imagery

We have selected square subareas (110 km on a side) from coastal zone color scanner (CZCS) and advanced very high resolution radiometer (AVHRR) images for 1981 in the California Current region off northern California for which we could identify sequences of cloud-free data over periods of days to weeks. We applied a two-dimensional fast Fourier transformation to images after median filtering, (x, y) plane removal, and cosine tapering. We formed autospectra and coherence spectra as functions of a scalar wavenumber. Coherence estimates between pairs of images were plotted against time separation between images for several wide wavenumber bands to provide a temporal lagged coherence function. The temporal rate of loss of correlation (decorrelation time scale) in surface patterns provides a measure of the rate of pattern change or evolution as a function of spatial dimension. We found that patterns evolved (or lost correlation) approximately twice as rapidly in upwelling jets as in the 'quieter' regions between jets. The rapid evolution of pigment patterns (lifetime of about 1 week or less for scales of 50-100 km) ought to hinder biomass transfer to zooplankton predators compared with phytoplankton patches that persist for longer times. We found no significant differences between the statistics of CZCS and AVHRR images (spectral shape or rate of decorrelation). In addition, in two of the three areas studied, the peak correlation between AVHRR and CZCS images from the same area occurred at zero lag, indicating that the patterns evolved simutaneously. In the third area, maximum coherence between thermal and pigment patterns occurred when pigment images lagged thermal images by 1-2 days, mirroring the expected lag of high pigment behind low temperatures (and high nutrients) in recently upwelled water. We conclude that in dynamic areas such as coastal upwelling systems, the phytoplankton cells (identified by pigment color patterns) behave largely as passive scalars at the mesoscale and that growth, death, and sinking of phytoplankton collectively play at most a mariginal role in determining the spectral statistics of the pigment patterns.

Denman, Kenneth L.↗

Disentangling X-Ray Emission Processes In Vela-Like Pulsars

This grant is to support analysis of data from the X-ray Multi-mirror Mission (XMM). Specifically, we have been awarded time to observe two young neutron stars, B1823-13 and B1046-58, whose X-ray emission is expected to be a complicated combination of emission from an associated supernova remnant, from a wind-powered synchrotron nebula, from magnetospheric pulsations, and from the surface of the neutron star itself. It is only with XMM's unique combination of spectral, temporal and angular resolution that all these different processes can be separated and studied. Observations of B1823-13 have been conducted and analyzed. We interpret the data as follows: The unpulsed extended non-thermal nature of the central core argues that the extended source of emission corresponds to synchrotron emission from a nebula powered by the pulsar. The temperature of the diffuse component is too high to be interpreted as thermal emission; we rather argue that this extended component is non-thermal emission from a surrounding supernova remnant shell.

Gaensler, Bryan↗

Example MODIS Global Cloud Optical and Microphysical Properties: Comparisons between Terra and Aqua

MODIS observations from the NASA EOS Terra spacecraft (launched in December 1999, 1030 local time equatorial crossing) have provided a unique data set of Earth observations. With the launch of the NASA Aqua spacecraft in May 2002 (1330 local time), two MODIS daytime (sunlit) and nighttime observations are now available in a 24 hour period, allowing for some measure of diurnal variability. We report on an initial analysis of several operational global (Level-3) cloud products from the two platforms. The MODIS atmosphere Level-3 products, which include clear-sky and aerosol products in addition to cloud products, are available as three separate files providing daily, eight-day, and monthly aggregations; each temporal aggregation is spatially aggregated to a 1 degree grid. The files contain approximately 600 statisitical datasets (from simple means and standard deviations to 1 - and 2-dimensional histograms). Operational cloud products include detection (cloud fraction), cloud-top properties, and daytimeonly cloud optical thickness and particle effective radius for both water and ice clouds. We will compare example global Terra and Aqua cloud fraction, optical thickness, and effective radius aggregations.

Hubanks, P. A.↗

DNS of Low-Pressure Turbine Cascade Flows with Elevated Inflow Turbulence Using a Discontinuous-Galerkin Spectral-Element Method

Recent progress towards developing a new computational capability for accurate and efficient high-fidelity direct numerical simulation (DNS) and large-eddy simulation (LES) of turbomachinery is described. This capability is based on an entropy- stable Discontinuous-Galerkin spectral-element approach that extends to arbitrarily high orders of spatial and temporal accuracy, and is implemented in a computationally efficient manner on a modern high performance computer architecture. An inflow turbulence generation procedure based on a linear forcing approach has been incorporated in this framework and DNS conducted to study the effect of inflow turbulence on the suction- side separation bubble in low-pressure turbine (LPT) cascades. The T106 series of airfoil cascades in both lightly (T106A) and highly loaded (T106C) configurations at exit isentropic Reynolds numbers of 60,000 and 80,000, respectively, are considered. The numerical simulations are performed using 8th-order accurate spatial and 4th-order accurate temporal discretization. The changes in separation bubble topology due to elevated inflow turbulence is captured by the present method and the physical mechanisms leading to the changes are explained. The present results are in good agreement with prior numerical simulations but some expected discrepancies with the experimental data for the T106C case are noted and discussed.

Garai, Anirban↗

Recombination smooths the time-signal disrupted by latency in within-host HIV phylogenies

Within-host HIV evolution involves several features that may disrupt standard phylogenetic reconstruction. One important feature is re-activation of latently integrated provirus, which has the potential to disrupt the temporal signal, leading to variation in the branch lengths and apparent evolutionary rates in a tree. Yet, real within-host HIV phylogenies tend to show clear, ladder-like trees structured by the time of sampling. Another important feature is recombination, which violates the fundamental assumption that evolutionary history can be represented by a single bifurcating tree. Thus, recombination complicates the within-host HIV dynamic by mixing genomes and creating evolutionary loop structures that cannot be represented in bifurcating trees. In this paper, we develop a coalescent-based simulator of within-host HIV evolution that includes latency, recombination, and effective population size dynamics that allows us to study the relationship between the true, complex genealogy of within-host HIV evolution, encoded as an Ancestral Recombination Graph (ARG), and the observed phylogenetic tree. To compare our ARG results to the familiar phylogeny format, we calculate the expected bifurcating tree after decomposing the ARG into all unique site trees, their combined distance matrix, and the overall corresponding bifurcating tree. While latency and recombination separately disrupt the phylogenetic signal, remarkably, we find that recombination recovers the temporal signal of within-host HIV evolution caused by latency by mixing fragments of old, latent genomes into the contemporary population. In effect, recombination averages over extant heterogeneity, whether it stems from mixed time-signals or population bottlenecks. Further, we establish that the signals of latency and recombination can be observed in phylogenetic trees despite being an incorrect representation of the true evolutionary history. Using an Approximate Bayesian Computation method, we develop a set of statistical probes to tune our simulation model to nine longitudinally-sampled within-host HIV phylogenies. Because ARGs are exceedingly difficult to infer from real HIV data, our simulation system allows investigating effects of latency, recombination, and population size bottlenecks by matching decomposed ARGs to real data as observed in standard phylogenies.

59 BASIC BIOLOGICAL SCIENCES↗

Wavelength Dependence of Activity-induced Photometric Variations for Young Cool Stars in Hyades

We investigate photometric variations due to stellar activity that induce systematic radial-velocity errors (so-called “jitter”) for the four targets in the Hyades open cluster observed by the K2 mission (EPIC 210721261, EPIC 210923016, EPIC 247122957, and EPIC 247783757). Applying Gaussian process regressions to the K2 light curves and the near-infrared (NIR) light curves observed with the IRSF 1.4 m telescope, we derive the wavelength dependences of the photometric signals due to stellar activity. To estimate the temporal variations in the photometric variability amplitudes between the two observation periods of K2 and IRSF, separated by more than 2 yr, we analyze a number of K2 targets in Hyades that have also been observed in Campaigns 4 and 13 and find a representative variation rate over 2 yr of 38% ± 71%. Taking this temporal variation into account, we constrain projected sizes and temperature contrast properties of the starspots in the stellar photosphere to be approximately 10% and 0.95%, respectively. These starspot properties can induce relatively large differences in the variability amplitude over different observational passbands, and we find that radial-velocity jitter may be more suppressed in the NIR than previously expected. Our result supports profits of ongoing exoplanet search projects that are attempting to detect or confirm young planets in open clusters via radial-velocity measurements in the NIR.

47 OTHER INSTRUMENTATION↗

Visualizing Temporal Topic Embeddings with a Compass

—Dynamic topic modeling is useful at discovering the development and change in latent topics over time. However, present methodology relies on algorithms that separate document and word representations. This prevents the creation of a meaningful embedding space where changes in word usage and documents can be directly analyzed in a temporal context. This paper proposes an expansion of the compass-aligned temporal Word2Vec methodology into dynamic topic modeling. Such a method allows for the direct comparison of word and document embeddings across time in dynamic topics. This enables the creation of visualizations that incorporate temporal word embeddings within the context of documents into topic visualizations. In experiments against the current state-of-the-art, our proposed method demonstrates overall competitive performance in topic relevancy and diversity across temporal datasets of varying size. Simultaneously, it provides insightful visualizations focused on temporal word embeddings while maintaining the insights provided by global topic evolution, advancing our understanding of how topics evolve over time.

Cluster analysis↗

Evaluation of normalization strategies for mass spectrometry-based multi-omics datasets

Introduction Data normalization is crucial for multi-omics integration, reducing systematic errors and maximizing the likelihood of discovering true biological variation. Most studies assess normalization for a single omics type or use datasets from separate experiments. Few address time-course data, where normalization might bias temporal differentiation. In this study, we compared common normalization methods and a machine learning approach, Systematical Error Removal using Random Forest (SERRF), using multi-omics datasets generated from the same experiment—even from the same cell lysate. Objectives To develop a straightforward process to assess normalization effects and identify the most robust methods across multi-omics datasets. Methods We analyzed metabolomics, lipidomics, and proteomics datasets from primary human cardiomyocytes and motor neurons exposed to acetylcholine-active compounds over time. Normalization effectiveness was evaluated based on improvement in QC features consistency and observing the change in treatment and time-related variance. Results Probabilistic Quotient Normalization (PQN) and Locally Estimated Scatterplot Smoothing (LOESS) QC were identified as optimal for metabolomics and lipidomics, while PQN, Median, and LOESS normalization excelled for proteomics. These methods consistently enhanced QC feature consistency in metabolomics and lipidomics, and preserved time-related variance or treatment-related variance in proteomics, demonstrating their effectiveness and robustness. SERRF normalization, applied only to metabolomics in this study, outperformed other methods in some datasets but inadvertently masked treatment-related variance in others. Conclusion Our evaluation identified PQN and LoessQC as the top methods for metabolomics and lipidomics, and PQN, Median, and Loess normalization for proteomics, in multi-omics integration in a temporal study.

60 APPLIED LIFE SCIENCES↗

Gallium oxide (Ga2O3) as a radiation detector distinguishing neutrons and gammas

Gallium oxide (Ga2O3) is a promising ultrawide bandgap semiconductor for radiation detection with the potential of integrating electronic and scintillation functions within a single crystal device. This study establishes the scintillation response of β-Ga2O3 gamma irradiation from yttrium-88 (88Y). Then, californium-252 (252Cf) is used as a spontaneous fission source of mixed neutron and gamma radiation field to measure scintillation signals. Pulse shape discrimination and constant fraction discrimination techniques were used to separate neutron and gamma interaction events. Further investigation indicates that the prompt temporal responses of β-Ga2O3 for gammas and neutrons may enable discrimination of the two by prompt pulse fitting methods, focused around the initial peak. For gamma irradiation, we observed a rise time (τr) of 2.1 ns, decay time (τd) of 9.5 ns, and a full width at half maximum (FWHM) of 6.2 ns. For neutrons, it showed a τr of 2.3 ns, a τd of 12.1 ns, 9.4 ns FWHM, and reduced peak intensity. A diamond detector exhibited a more symmetrical τr and τd for both gamma and neutron signals and therefore is less effective at discriminating between the two by this method. This draws attention to β-Ga2O3’s ability to distinguish neutron and gamma particles. These findings showcase Ga2O3’s potential as a next-generation semiconductor for applications in nuclear safety and medical imaging, where precise discrimination between neutron and gamma interactions is essential.

Valdes, D. J. (ORCID:0000000304373720)↗